DR405896

Overview
NameDR405896
Unique NameDR405896
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length461
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2614 contig Csv1_Contig2614:252..711. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DR405896 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.631e-13
Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = 1 
Query:    4 VKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 153
            VKKGSSY AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:   17 VKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64
The following BLAST results are available for this feature:
BLAST of DR405896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MT3_CARPA4.631e-1364.00Metallothionein-like protein type 3 OS=Carica papa... [more]
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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248B18 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248B18 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405896 ID=DR405896; Name=DR405896; organism=Citrus sinensis; type=EST; length=461bp
GGGGTGAAGAAGGGAAGCAGCTATGCTGCTGACTTCGTCGAGACTGACTT
GAGCTTTGTCAGCACCGTTGTTGTCATGGACGTTCAGGCTGCTGAGGCTG
AAGGTAACTGCAAGTGCGGCCCCACCTGCGCTTGTGTGAACTGCACTTGT
GGTAGTCACTAATAAGCAAACACATGCAGCAAAAAATAAGAAGCTGCAAG
TGTGCCTAAATATTGTGGGGGTTAAGAATAATGTAAGGGTGATTTAAAAA
AAAAAGAAAAATTCTCTACTTCGTTTTTATGATGGTCTACTACTAGTGTG
TGGAGTGATGTGCGTGTTGTGTCACCCATCACTCGTAATGTTTTGTGTTT
CCTTCTTCATAATCATGTAATATATGGCCATGGCCATGACCGTGGCCTTG
TGTGGTTTAATTTTAATGTATTATTGTTAGTCCAAAAAAAAAAAAAAAAA
AAAAAAAAAAA
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