DR405893

Overview
NameDR405893
Unique NameDR405893
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length752
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6302 contig Csv1_Contig6302:1..752. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR405893 vs. ExPASy Swiss-Prot
Match: CANB1_NAEGR (Calcineurin subunit B OS=Naegleria gruberi GN=CNB1 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.370e-25
Identity = 61/149 (40.94%), Postives = 100/149 (67.11%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDA 742
            MGT +S L   ++EE+Q+  +  F+Q+EI  LY+RF +LD++  G IS DEFL +PE A+NPL +R++ + D      +NFK+F+A LSVF+A+   Q+K++  FKVYD D +G +S  ++  VL+ + G+ +SD Q +Q++ +   +A
Sbjct:    1 MGTNTSSLRPEEVEEMQKGTN--FTQKEIKKLYKRFKKLDKDGNGTISKDEFLMIPELAVNPLVKRVISIFDENGDGSVNFKEFIAALSVFNAQGDKQRKLEFAFKVYDIDGDGYISNGELFTVLKMMVGNNLSDVQLQQIVDKTILEA 147          
BLAST of DR405893 vs. ExPASy Swiss-Prot
Match: CANB1_DICDI (Calcineurin subunit B type 1 OS=Dictyostelium discoideum GN=cnbA PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.674e-21
Identity = 48/151 (31.79%), Postives = 96/151 (63.58%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGY 748
            MG   S+L +  +E+++ +  + FS+ E+  LY+RF  LD++  G ++ DEFLS+P+ A+NPL +R++++ D      + F +FV  L+  S K + + K++ +F++YD DC+G +S  ++ +VL+ + G+ ++D Q +Q++ +   +  Y
Sbjct:    1 MGNQHSLLNKEQLEQMKDN--SSFSEAELKKLYRRFQMLDKDGSGTLTTDEFLSIPDLALNPLLERVIQIFDQNKDNEIEFFEFVGTLATLSHKGTKEDKLKFLFQIYDIDCDGFISNGELFQVLKMMVGTNLNDVQLQQIVDKTIIEGDY 149          
BLAST of DR405893 vs. ExPASy Swiss-Prot
Match: CANB2_DICDI (Calcineurin subunit B type 2 OS=Dictyostelium discoideum GN=cnbB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.733e-20
Identity = 53/149 (35.57%), Postives = 92/149 (61.74%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDA 742
            MG + S L   +IEE+++   ++FSQ+EI  LY+RF +LD+  KG I+ ++F  +PE +MNP+  R++ + D      +NFK FV  LS F  KA    K++++FKVYD + +G ++ ++I  +L  + GS ++ EQ   ++ +   +A
Sbjct:    1 MGVSRSTLRTEEIEEIREV--SIFSQREIKRLYKRFKRLDKEEKGSINVEDFNQIPELSMNPMLPRIISIFDVNRDGQVNFKQFVKSLSTFHPKADKADKIKILFKVYDINNDGFITRDEIETILTMMVGSNLTKEQISSIVEETLNEA 147          
BLAST of DR405893 vs. ExPASy Swiss-Prot
Match: CANB_NEUCR (Calcineurin subunit B OS=Neurospora crassa GN=cnb-1 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.767e-18
Identity = 45/126 (35.71%), Postives = 83/126 (65.87%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDA 742
            F ++E+  L +RF +LD++  G I  +EFLS+P+ + NPL+ R++ + D      ++F++FV+ LS FS+K + +QK++  FKVYD D +G +S  ++  VL+ + GS + D+Q +Q++ +   +A
Sbjct:   18 FDREEVDRLRKRFMKLDKDNSGTIEREEFLSLPQISTNPLATRMIAIFDEDGGGDVDFQEFVSGLSAFSSKGNKEQKLRFAFKVYDIDRDGYISNGELFIVLKMMVGSNLKDQQLQQIVDKTIMEA 143          
BLAST of DR405893 vs. ExPASy Swiss-Prot
Match: CANB_CRYNE (Calcineurin subunit B OS=Cryptococcus neoformans GN=CNB1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.767e-18
Identity = 45/126 (35.71%), Postives = 79/126 (62.70%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDA 742
            FS  E++ L +RF +LD++  G I  DEFL +P+ A NPL+ R++ + D      ++F++FV  LS FS+K    +K++  FKVYD D +G +S  ++  VL+ + G+ + D+Q +Q++ +   +A
Sbjct:   18 FSGPELMRLKKRFMKLDKDGSGSIDKDEFLQIPQIANNPLAHRMIAIFDEDGSGTVDFQEFVGGLSAFSSKGGRDEKLRFAFKVYDMDRDGYISNGELYLVLKQMVGNNLKDQQLQQIVDKTIMEA 143          
BLAST of DR405893 vs. ExPASy Swiss-Prot
Match: CANB_ASHGO (Calcineurin subunit B OS=Ashbya gossypii GN=CNB1 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.614e-18
Identity = 48/148 (32.43%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLN-----FKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKD 739
            MG+A S + +  +++        F ++EI  L +RF +LDR++ G I  +EF+S+P  + NPL+ R++++ D  N     F++F++ LSVFS ++  ++K++  FK+YD D +G +S  ++  VL+ + G+ + DEQ +QV+ +   +
Sbjct:    1 MGSAPSKILEDLLDDTN------FDREEIERLRKRFMKLDRDSSGSIDKNEFMSIPGVSSNPLAGRIMEVFDADNSGDVDFQEFISGLSVFSGRSDKEEKLRFAFKIYDIDKDGYISNGELFIVLKIMVGNNLEDEQLQQVVDRTIME 142          
BLAST of DR405893 vs. ExPASy Swiss-Prot
Match: CANB_CANGA (Calcineurin subunit B OS=Candida glabrata GN=CNB1 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.720e-18
Identity = 48/148 (32.43%), Postives = 88/148 (59.46%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLN-----FKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKD 739
            MG A S + +  +E+        F + EI  L +RF +LDR++ G I  +EF+S+P  + NPL+ R++++ D  N     F++F+  LS+FS + S  +K++  FK+YD D +G +S  ++  VL+ + GS + D+Q +Q++ +   +
Sbjct:    1 MGAAPSKIVETLLEDTN------FDRDEIERLRKRFMKLDRDSSGSIDKNEFMSIPGVSANPLAGRIMEVFDADNSGDVDFQEFITGLSIFSGRGSKDEKLKFAFKIYDIDKDGLISNGELFIVLKIMVGSNLDDKQLQQIVDRTIME 142          
BLAST of DR405893 vs. ExPASy Swiss-Prot
Match: CANB_YEAST (Calcineurin subunit B OS=Saccharomyces cerevisiae GN=CNB1 PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 6.164e-18
Identity = 49/142 (34.51%), Postives = 85/142 (59.86%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLN-----FKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            MG A S +    +E+        F + EI  L +RF +LDR++ G I  +EF+S+P  + NPL+ R++++ D  N     F++F+  LS+FS + S  +K++  FK+YD D +G +S  ++  VL+ + GS + DEQ +Q++
Sbjct:    1 MGAAPSKIVDGLLEDTN------FDRDEIERLRKRFMKLDRDSSGSIDKNEFMSIPGVSSNPLAGRIMEVFDADNSGDVDFQEFITGLSIFSGRGSKDEKLRFAFKIYDIDKDGFISNGELFIVLKIMVGSNLDDEQLQQIV 136          
BLAST of DR405893 vs. ExPASy Swiss-Prot
Match: CANB_YARLI (Calcineurin subunit B OS=Yarrowia lipolytica GN=CNB1 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.059e-17
Identity = 46/126 (36.51%), Postives = 78/126 (61.90%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDA 742
            FS  EI  L +RF +LD +A G +  +EFLS+P  A NPL+ RL+ + D      ++F++F+  LS FS K + ++K++  FKVYD D +G +S  ++  VL+ + G+ + D Q +Q++ +   +A
Sbjct:   17 FSSDEIDRLRKRFMKLDTDASGILETNEFLSLPGVAANPLASRLMDVFDENHSGDVDFQEFINGLSTFSTKGNKKEKLRFAFKVYDIDRDGYISNGELFIVLKMMVGNNLKDAQLQQIVDKTIMEA 142          
BLAST of DR405893 vs. ExPASy Swiss-Prot
Match: CANB_SCHPO (Calcineurin subunit B OS=Schizosaccharomyces pombe GN=cnb1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.219e-17
Identity = 43/125 (34.40%), Postives = 78/125 (62.40%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKD 739
            FS +EI  + +RF ++D N  G I  +EFLS+P  A NPL+ RL  +VD      ++F++F+  LSVFS   + ++K++  FK+YD D +G +S  ++  VL+ + G+ + ++Q +Q++ +   +
Sbjct:   18 FSNEEIERIRKRFIKIDANQSGSIDRNEFLSIPSVASNPLASRLFSVVDEDGGGDVDFQEFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDKTIME 142          
The following BLAST results are available for this feature:
BLAST of DR405893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
CANB1_NAEGR1.370e-2540.94Calcineurin subunit B OS=Naegleria gruberi GN=CNB1... [more]
CANB1_DICDI2.674e-2131.79Calcineurin subunit B type 1 OS=Dictyostelium disc... [more]
CANB2_DICDI1.733e-2035.57Calcineurin subunit B type 2 OS=Dictyostelium disc... [more]
CANB_NEUCR2.767e-1835.71Calcineurin subunit B OS=Neurospora crassa GN=cnb-... [more]
CANB_CRYNE2.767e-1835.71Calcineurin subunit B OS=Cryptococcus neoformans G... [more]
CANB_ASHGO3.614e-1832.43Calcineurin subunit B OS=Ashbya gossypii GN=CNB1 P... [more]
CANB_CANGA4.720e-1832.43Calcineurin subunit B OS=Candida glabrata GN=CNB1 ... [more]
CANB_YEAST6.164e-1834.51Calcineurin subunit B OS=Saccharomyces cerevisiae ... [more]
CANB_YARLI3.059e-1736.51Calcineurin subunit B OS=Yarrowia lipolytica GN=CN... [more]
CANB_SCHPO5.219e-1734.40Calcineurin subunit B OS=Schizosaccharomyces pombe... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248B15 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248B15 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405893 ID=DR405893; Name=DR405893; organism=Citrus sinensis; type=EST; length=752bp
GGGGACGAGGAATATCCCACGCAATTCTCCGAAAATCAACGGCCGATAAA
ACGACGAAACATAAAAAAGAATGTTACTGCGTGACAGAGAATAATCGGTG
ATGAGGATGAACATCAGATTCCTCGTCATCTAGTACAAACAAAATACTAT
TCTGTGTGTTTTCAATGGCTCGATGATGACGAAGGAGTTTCTGTCATCTA
TATTTCCCGATACTTCATCTTCATCTAAACTCATCTCCTAGCGGTCGGTT
CTTTTTTTCCTACATTTTCTGTTTGTTTCCCGAGAAAACCCAGTTTTGGA
GCGAGAATCAATGGGGACTGCCTCGTCTATGCTAACTCAATATGATATTG
AAGAGGTTCAACAGCACTGCCACAATCTATTTTCTCAACAAGAAATAGTG
TCGTTGTACCAAAGGTTTTGCCAGCTAGATAGAAATGCCAAGGGATTCAT
CTCTGCAGATGAGTTCTTGTCGGTGCCTGAATTTGCAATGAATCCACTTT
CTCAGAGGTTGCTAAAGATGGTGGATGGGTTGAACTTCAAGGATTTTGTG
GCCTTCTTGTCTGTTTTCAGTGCTAAGGCAAGCATGCAGCAGAAAGTTCA
GCTTATTTTCAAAGTGTACGACTCAGACTGTAATGGAAAGGTTTCTTTCA
ATGACATATTGGAAGTGCTGCGGGATTTGTCTGGTTCTTTTATGTCCGAT
GAGCAAAGAGAGCAAGTCTTGACCCAAGTATTCAAGGATGCAGGTTACAC
AA
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