CX069373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069373 vs. ExPASy Swiss-Prot
Match: VP321_ARATH (Vacuolar protein sorting-associated protein 32 homolog 1 OS=Arabidopsis thaliana GN=VPS32.1 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.735e-46 Identity = 93/99 (93.94%), Postives = 96/99 (96.97%), Query Frame = -3 Query: 561 YSKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 857 +S+AKNKRAAIQCLKRKRLYEQQ+EQLGNFQLRIHDQMIMLEGAKATTETVDALRTGAS MKAMQKATNIDDVDKTMDEINEQTENMKQIQEALS P G Sbjct: 51 FSRAKNKRAAIQCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSAPFG 149
BLAST of CX069373 vs. ExPASy Swiss-Prot
Match: VP322_ARATH (Vacuolar protein sorting-associated protein 32 homolog 2 OS=Arabidopsis thaliana GN=VPS32.2 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 5.048e-46 Identity = 92/99 (92.93%), Postives = 97/99 (97.98%), Query Frame = -3 Query: 561 YSKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 857 YS+AKNKRAAIQCLKRKRLYE Q+EQLGNFQLRIHDQMIMLEGAKATTETVDALR+GAS MKAMQKATNIDDVDKTMDEINEQTENMKQIQEAL+TP+G Sbjct: 50 YSRAKNKRAAIQCLKRKRLYEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALATPMG 148
BLAST of CX069373 vs. ExPASy Swiss-Prot
Match: SNF7_KLULA (Vacuolar-sorting protein SNF7 OS=Kluyveromyces lactis GN=SNF7 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.313e-13 Identity = 39/93 (41.94%), Postives = 58/93 (62.37%), Query Frame = -3 Query: 564 NKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPI 842 NK A LK+K+LYE Q+++L + + Q+ +E A ET+ A++ GAS MK + K ++D VD TMDEI EQ E ++I EA+S P+ Sbjct: 56 NKNNAKTYLKKKKLYESQLDKLQSQIDSLDQQLYSIENANLNLETLKAMKQGASAMKNIHKGLDLDKVDDTMDEIREQVELNQEISEAISKPL 148
BLAST of CX069373 vs. ExPASy Swiss-Prot
Match: CHM4B_DANRE (Charged multivesicular body protein 4b OS=Danio rerio GN=chmp4b PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.639e-12 Identity = 40/95 (42.11%), Postives = 55/95 (57.89%), Query Frame = -3 Query: 561 KNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 845 KNKRAA+Q LKRK+ YE+Q+ Q+ I Q LE A TE + + A MKA +ID VD+ M +I EQ E ++I +A+S P+G Sbjct: 58 KNKRAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENAHTNTEVIKNMGYAAKAMKAAHDNMDIDKVDELMQDIIEQQELAQEISDAISKPVG 152
BLAST of CX069373 vs. ExPASy Swiss-Prot
Match: SNF7_SCHPO (Vacuolar-sorting protein snf7 OS=Schizosaccharomyces pombe GN=snf7 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.796e-12 Identity = 33/94 (35.11%), Postives = 58/94 (61.70%), Query Frame = -3 Query: 561 NKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 842 NKR A+ LKRK+++E ++ ++ + I Q+ ++ A ET+ A+R GA MK++Q+ + D VD+ MD+I +Q ++I +STP+G Sbjct: 56 NKRLALTALKRKKMHENELVKIEGSRNNIEQQLFSIQNANLNFETLQAMRQGAEAMKSIQRGMDADKVDQIMDKIRDQQTISEEISTMISTPVG 149
BLAST of CX069373 vs. ExPASy Swiss-Prot
Match: CHM4C_DANRE (Charged multivesicular body protein 4c OS=Danio rerio GN=chmp4c PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.796e-12 Identity = 39/95 (41.05%), Postives = 54/95 (56.84%), Query Frame = -3 Query: 561 KNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 845 KNKRAA+Q LKRK+ YE+Q+ Q+ I Q LE A TE + + A MK + +ID VD M +I EQ E ++I +A+S P+G Sbjct: 58 KNKRAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKTAHENMDIDKVDDLMQDITEQQELAQEISDAISRPVG 152
BLAST of CX069373 vs. ExPASy Swiss-Prot
Match: SNF7_CANAL (Vacuolar-sorting protein SNF7 OS=Candida albicans GN=SNF7 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.651e-12 Identity = 38/99 (38.38%), Postives = 56/99 (56.57%), Query Frame = -3 Query: 561 YSKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 857 Y +K A LKRK+ YE + ++ N + Q+I +EGA ET+ A++ GA MK + ++D V+ TMDEI EQ E +I EA+S P+G Sbjct: 52 YVSSKQTTLAKSALKRKKGYESNLLKVENQIETLETQLISIEGANLNLETMKAMKQGAKAMKQIHGEYDVDKVEDTMDEIREQVELADEISEAISRPVG 150
BLAST of CX069373 vs. ExPASy Swiss-Prot
Match: SNF7_CANGA (Vacuolar-sorting protein SNF7 OS=Candida glabrata GN=SNF7 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.769e-12 Identity = 36/93 (38.71%), Postives = 57/93 (61.29%), Query Frame = -3 Query: 564 NKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPI 842 NK A LK+K++YE Q+ +L + + Q+ +E A ET+ A++ GA MK++ +ID VD+TMDEI EQ E ++I +A+S P+ Sbjct: 57 NKTMAKNALKKKKVYEGQLVKLESQMDSLEQQLFSIESANLNLETMRAMKQGAKAMKSIHSGLDIDRVDETMDEIREQVELGEEISDAISRPL 149
BLAST of CX069373 vs. ExPASy Swiss-Prot
Match: CHM4B_CHICK (Charged multivesicular body protein 4b OS=Gallus gallus GN=CHMP4B PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.228e-12 Identity = 40/95 (42.11%), Postives = 53/95 (55.79%), Query Frame = -3 Query: 561 KNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 845 KNKRAA+Q LKRK+ YE+Q+ Q+ I Q LE A TE + + A MKA +ID VD+ M +I EQ E +I A+S P+G Sbjct: 62 KNKRAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKAAHDNMDIDKVDELMQDIAEQQELADEISTAISKPVG 156
BLAST of CX069373 vs. ExPASy Swiss-Prot
Match: CHM4B_MOUSE (Charged multivesicular body protein 4b OS=Mus musculus GN=Chmp4b PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 8.134e-12 Identity = 39/95 (41.05%), Postives = 54/95 (56.84%), Query Frame = -3 Query: 561 KNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 845 KNKRAA+Q LKRK+ YE+Q+ Q+ I Q LE A TE + + A MKA +ID VD+ M +I +Q E ++I A+S P+G Sbjct: 60 KNKRAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAHDNMDIDKVDELMQDIADQQELAEEISTAISKPVG 154 The following BLAST results are available for this feature:
BLAST of CX069373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069373 ID=CX069373; Name=CX069373; organism=Citrus sinensis; type=EST; length=859bpback to top |