DR403367
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403367 vs. ExPASy Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 9.263e-70 Identity = 125/180 (69.44%), Postives = 151/180 (83.89%), Query Frame = 1 Query: 220 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEK 759 + KSKV+RLFGRE+P+H VLG GKPADIF+W+NKK+S GVLGGATA WV+FEL+EYHL+TL+CH+ I+ LAVLFLWSNA+ FINKSPP+IP V +PE+ +L+ AS LR EINR + LREIASGRDLKKFL IAGLW+LSI+G NF+TL YI VLL TVP+ Y+KYEDK+D GEK Sbjct: 65 SMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEK 244
BLAST of DR403367 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.580e-69 Identity = 127/180 (70.56%), Postives = 150/180 (83.33%), Query Frame = 1 Query: 220 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEK 759 + K+K++RLFGRE+P+H + G GKPADIFLWRNKK+S GVLG AT W+LFELLEY+L+TL HISIL+LAVLFLWS+ASTFI+KSP IP V +PE VL+ AS LR EINR VLR+IASGRDLKKFL VIAGLW+LS VG+ CNF+TL YI VLL T+PV+YEKYEDK+D FGEK Sbjct: 40 SLKTKIYRLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEK 219
BLAST of DR403367 vs. ExPASy Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 3.520e-69 Identity = 121/180 (67.22%), Postives = 153/180 (85.00%), Query Frame = 1 Query: 220 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEK 759 + KSKV+RLFGRE+P+H VLG GKPADIF+W++KK+S GV GGAT WVLFEL+EYHL+TL+CH+ I++LAVLFLWSNA+ FI+KSPP+IP V +PE+ +L+ AS LR EINR ++ LREIASGRD+KKFL IAGLW+LSI+G +F+TL YI VLL TVP+ Y+KYEDK+DS+GEK Sbjct: 61 SLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEK 240
BLAST of DR403367 vs. ExPASy Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 6.004e-69 Identity = 121/180 (67.22%), Postives = 147/180 (81.67%), Query Frame = 1 Query: 220 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEK 759 +FKSK++RLFGREKP+H VLG GKPADIFLWRNKK+S GVLG TA WVLFEL EYHL+ +CH +I +LA LFLWSNA TFI+KS P IP V +PE +L+ S LR EINR L +LR IASG+D+KKF+ VIAGLW+LSI+G+ NF+TLFY VLL T+PV+YEKYEDK+D++GEK Sbjct: 44 SFKSKIYRLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEK 223
BLAST of DR403367 vs. ExPASy Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.892e-68 Identity = 125/223 (56.05%), Postives = 163/223 (73.09%), Query Frame = 1 Query: 94 MAEHAPEHESADKSLVEKITXXXXXXXXXXXXXXXXXXXXXX-AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEK 759 MAE + ++SL+EKI+ A K+K++R+FGREKP+H VLG GKPAD+FLWR+KK+S VLG ATA+WVLFEL+EYHL++L+CHISIL+L LFLWSNA T INK+ P+IP + +PE+ L AS+LR E+N+A +LR IA GRDLKKFL V+ GLW++S+VGNW NF+TL YI FV+LHTVP++YEK+EDK+D EK Sbjct: 1 MAEEIEKSVPTEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEK 223
BLAST of DR403367 vs. ExPASy Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 2.361e-65 Identity = 115/180 (63.89%), Postives = 146/180 (81.11%), Query Frame = 1 Query: 220 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEK 759 A K+K++RLFGREKP+H VLG G PAD+FLWR+KK+SA VLG ATA+WVLFEL+EYH ++LVCHI I +LA LFL SNA F+NK+PP+IP + + E+ L SALR E+N+A +LR IA GRDLKKFL V+ GLW++S+VGNW NF+TL YI FV+LHTVP++YEK+EDK+D EK Sbjct: 44 ALKAKIYRLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEK 223
BLAST of DR403367 vs. ExPASy Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.145e-50 Identity = 91/174 (52.30%), Postives = 127/174 (72.99%), Query Frame = 1 Query: 229 SKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 750 S+ RLF R+KPIHHVLG GK AD+ LWRNKKISA VL GATA+WVLFE + +H ++LVC+ +L + F+WSNAS F+N+S +P + LP+ F E A+ E+NR L L+++A +LK+FL + GLW+ ++VG+ CNF+T+ YI FV HT+PV+YE+YED++D F Sbjct: 40 SRFNRLFDRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGF 213
BLAST of DR403367 vs. ExPASy Swiss-Prot
Match: RTNLG_ARATH (Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=2 SV=2) HSP 1 Score: 196.823 bits (499), Expect = 1.065e-49 Identity = 92/175 (52.57%), Postives = 128/175 (73.14%), Query Frame = 1 Query: 235 VFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEK 759 ++R+FGRE+PIH VLG GKPAD+ LWR+KK++ G+L T +W+LF L+T +C SIL L + FLWSNA +NKSP + + +PEK +L+ ASA+ +E+N A A LR IA RD+K F+ + GLWL+S++GNW +F++L YI FVL+HTVP++YEKYED+ID EK Sbjct: 51 IYRMFGRERPIHMVLGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGSILFLLLSFLWSNA---LNKSPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALERDIKNFVMAVIGLWLVSVIGNWFSFLSLLYICFVLIHTVPMLYEKYEDEIDPIAEK 222
BLAST of DR403367 vs. ExPASy Swiss-Prot
Match: RTNLI_ARATH (Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.763e-36 Identity = 74/176 (42.05%), Postives = 107/176 (60.80%), Query Frame = 1 Query: 232 KVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEK 759 K +LF R++ IH + G GK ADI LWR KI+A ++ G + +W L E++EY+ ITL+CH S+ S+ F+WS AS F+N P IP V L E + A + N+ L L ++A GRD F L+++SI+G + NFV L +I FV + T+PV+YE YED +D+ K Sbjct: 19 KTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGK 194
BLAST of DR403367 vs. ExPASy Swiss-Prot
Match: RTNLL_ARATH (Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.466e-30 Identity = 62/167 (37.13%), Postives = 101/167 (60.48%), Query Frame = 1 Query: 241 RLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKI 741 +LF R++ IH +LG G AD+ LWR K +S G++ A W++FE Y + TL+ + +L L++LFLWS +++ +N+ P +P + E E + LR +N+ L V +IA RD + + V L+LLS++G+ +F TL + +++ TVP YE+YED I Sbjct: 7 KLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173 The following BLAST results are available for this feature:
BLAST of DR403367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403367 ID=DR403367; Name=DR403367; organism=Citrus sinensis; type=EST; length=760bpback to top |