DR403326

Overview
NameDR403326
Unique NameDR403326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length505
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6083 contig Csv1_Contig6083:1..505. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403326 vs. ExPASy Swiss-Prot
Match: TATA_SYNP6 (Sec-independent protein translocase protein tatA/E homolog OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=tatA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.885e-15
Identity = 35/62 (56.45%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  284 FGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDPPGE 469
            FG+G+PE++VI  +A LVFGPKKLPE+G+S+GK ++ FQ A++EFESE+K+E D     P E
Sbjct:    4 FGIGLPEMLVILAIALLVFGPKKLPEIGRSLGKALRGFQDASREFESEIKREIDRTPATPAE 65          
BLAST of DR403326 vs. ExPASy Swiss-Prot
Match: TATA_SYNE7 (Sec-independent protein translocase protein tatA/E homolog OS=Synechococcus elongatus (strain PCC 7942) GN=tatA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.885e-15
Identity = 35/62 (56.45%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  284 FGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDPPGE 469
            FG+G+PE++VI  +A LVFGPKKLPE+G+S+GK ++ FQ A++EFESE+K+E D     P E
Sbjct:    4 FGIGLPEMLVILAIALLVFGPKKLPEIGRSLGKALRGFQDASREFESEIKREIDRTPATPAE 65          
BLAST of DR403326 vs. ExPASy Swiss-Prot
Match: TATA_THEEB (Sec-independent protein translocase protein tatA/E homolog OS=Thermosynechococcus elongatus (strain BP-1) GN=tatA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.166e-14
Identity = 35/74 (47.30%), Postives = 54/74 (72.97%), Query Frame = 2
Query:  281 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKK-----EPDSETDPPGEKPTAIS 487
            +FG+G+PEL+VI  VA L+FGPKKLPE+G+S+GKT ++F++A++EF+ E+K+     E + +     E P  IS
Sbjct:    3 VFGIGLPELIVILVVALLIFGPKKLPEIGRSLGKTKRAFEEASREFQDEIKRQTAALEEEQQAKAEAESPREIS 76          
BLAST of DR403326 vs. ExPASy Swiss-Prot
Match: TATA_TRIEI (Sec-independent protein translocase protein tatA/E homolog OS=Trichodesmium erythraeum (strain IMS101) GN=tatA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.026e-12
Identity = 29/53 (54.72%), Postives = 45/53 (84.91%), Query Frame = 2
Query:  281 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE 439
            +FG+G+PE++VI  VA L+FGPKKLPE+G+S+G+ + SF+  A++FE+E K+E
Sbjct:    3 IFGIGLPEMIVILVVALLIFGPKKLPEIGRSLGQAINSFKAGARDFENEFKRE 55          
BLAST of DR403326 vs. ExPASy Swiss-Prot
Match: TATA_PROM2 (Sec-independent protein translocase protein tatA/E homolog OS=Prochlorococcus marinus (strain MIT 9215) GN=tatA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.900e-12
Identity = 33/78 (42.31%), Postives = 55/78 (70.51%), Query Frame = 2
Query:  281 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDPP----GEKPTAISEERKD 502
            +FG+G+PE+ VI  +A L+FGPKKLPE+GK +GKT+KS ++A+ EF++E+ +  + E + P      +   I++E+ D
Sbjct:    3 IFGVGLPEVTVILILALLIFGPKKLPELGKQLGKTLKSLKKASNEFQNEIDQVMNEEDESPKSIESNQTNEINQEKID 80          
BLAST of DR403326 vs. ExPASy Swiss-Prot
Match: TATA_PROM0 (Sec-independent protein translocase protein tatA/E homolog OS=Prochlorococcus marinus (strain MIT 9301) GN=tatA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.093e-12
Identity = 35/80 (43.75%), Postives = 55/80 (68.75%), Query Frame = 2
Query:  281 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESEL---KKEPDSETDP---PGEKPTAISEERKD 502
            +FG+G+PE+ VI  +A L+FGPKKLPE+GK +GKT+KS ++A+ EF++E+    KE D +  P      +   I++E+ D
Sbjct:    3 IFGVGLPEVTVILILALLIFGPKKLPELGKQLGKTLKSLKKASNEFQNEIDQVMKEEDKDESPKSIESNQSNEINQEKID 82          
BLAST of DR403326 vs. ExPASy Swiss-Prot
Match: TATA_PROMS (Sec-independent protein translocase protein tatA/E homolog OS=Prochlorococcus marinus (strain AS9601) GN=tatA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.482e-11
Identity = 34/80 (42.50%), Postives = 55/80 (68.75%), Query Frame = 2
Query:  281 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKK---EPDSETDP---PGEKPTAISEERKD 502
            +FG+G+PE+ VI  +A L+FGPKKLPE+GK +GKT+KS ++A+ EF++E+ +   E D +  P      +   I++E+ D
Sbjct:    3 IFGVGLPEVTVILILALLIFGPKKLPELGKQLGKTLKSLKKASNEFQNEIDQVMNEQDKDESPISIESNQTNEINQEKID 82          
The following BLAST results are available for this feature:
BLAST of DR403326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
TATA_SYNP62.885e-1556.45Sec-independent protein translocase protein tatA/E... [more]
TATA_SYNE72.885e-1556.45Sec-independent protein translocase protein tatA/E... [more]
TATA_THEEB4.166e-1447.30Sec-independent protein translocase protein tatA/E... [more]
TATA_TRIEI1.026e-1254.72Sec-independent protein translocase protein tatA/E... [more]
TATA_PROM23.900e-1242.31Sec-independent protein translocase protein tatA/E... [more]
TATA_PROM05.093e-1243.75Sec-independent protein translocase protein tatA/E... [more]
TATA_PROMS1.482e-1142.50Sec-independent protein translocase protein tatA/E... [more]
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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244J18 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244J18 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403326 ID=DR403326; Name=DR403326; organism=Citrus sinensis; type=EST; length=505bp
GGGGATCCATCTTCATCAACATCGAAACACATAAAAATTGACCAAAAAAT
CCTAGNNNACAAAAGGAAAACCAAAATAATAAAAAATGGTGATCTCCTCA
TCTTTAGCTCTCTCACTCTCTTCGTCCTCTTCTTTTCTGTCAACAAGACC
CCCATCACCACATTTTCTCTCCCTCTCTTCTTCCCGCTCCAGTTTCTTCA
CCAACCTCAAGACCAACTCTTTGGTTGTGGGTCCCAGGGGAGGAAGTGGA
AAGGGCAGGAAGGGTTTTACTTGCTATGCTCTGTTTGGCCTCGGAGTGCC
TGAACTGGTTGTTATTGCTGGAGTTGCTGCTTTAGTTTTTGGTCCCAAGA
AGTTGCCTGAAGTTGGCAAGAGTATTGGCAAGACTGTAAAGAGCTTTCAA
CAGGCTGCTAAGGAGTTTGAGTCTGAGCTTAAAAAGGAACCTGATTCTGA
AACAGATCCTCCTGGGGAGAAGCCGACAGCAATCAGTGAAGAGCGGAAAG
ATGAA
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