DR403279

Overview
NameDR403279
Unique NameDR403279
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DR403279_ssr9 microsatellite DR403279_ssr9:9..32. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig12102 contig Csv1_Contig12102:1..659. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403279 vs. ExPASy Swiss-Prot
Match: IFRH_SOLTU (Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.104e-83
Identity = 157/206 (76.21%), Postives = 177/206 (85.92%), Query Frame = 3
Query:   75 ASILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSGFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPK-VYNKEDDIGTYTIKAVDDPRTLN 689
            + IL IGGTGYIGKFIVEAS KAGH TFVLVREST+S P+K++L+D FK+ GV  V GD+ +HESLVKAIKQVDVVISTVGHALLADQVK+IAAIKEAGNVKRFFPS FGNDVDRVH AVEP K+ ++ KA+IRR VEAEGIP+TYV ++FF GY LPNL QPGA  PP DKVVI G GN K V+NKE+DIGTYTI AVDDP+TLN
Sbjct:    5 SKILFIGGTGYIGKFIVEASAKAGHDTFVLVRESTLSNPTKTKLIDTFKSFGVTFVHGDLYDHESLVKAIKQVDVVISTVGHALLADQVKLIAAIKEAGNVKRFFPSEFGNDVDRVH-AVEPAKAAFNTKAQIRRVVEAEGIPFTYVATFFFAGYSLPNLAQPGAAGPPNDKVVILGHGNTKAVFNKEEDIGTYTINAVDDPKTLN 209          
BLAST of DR403279 vs. ExPASy Swiss-Prot
Match: IFRH_TOBAC (Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 1.848e-71
Identity = 138/210 (65.71%), Postives = 162/210 (77.14%), Query Frame = 3
Query:   63 VSEMASILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSGFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPK-VYNKEDDIGTYTIKAVDDPRTLN 689
            VSE + IL IGGTGYIGK++VE S K+GHPTF L+REST+  P KS+L+D FK+ GV ++ GD+ N ESL+KAIKQVDVVISTVG     DQV II AIKEAGN+KRF PS FG DVD    A+EP  S + +K +IRR +EAEGIPYTYV   +F  +FLPNL Q  A  PPRDKVVIFGDGNPK +Y KE+DI TYTI+AVDDPRTLN
Sbjct:    3 VSEKSKILIIGGTGYIGKYLVETSAKSGHPTFALIRESTLKNPEKSKLIDTFKSYGVTLLFGDISNQESLLKAIKQVDVVISTVGGQQFTDQVNIIKAIKEAGNIKRFLPSEFGFDVDHAR-AIEPAASLFALKVRIRRMIEAEGIPYTYVICNWFADFFLPNLGQLEAKTPPRDKVVIFGDGNPKAIYVKEEDIATYTIEAVDDPRTLN 211          
BLAST of DR403279 vs. ExPASy Swiss-Prot
Match: IFRH_ARATH (Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 9.170e-71
Identity = 142/211 (67.30%), Postives = 163/211 (77.25%), Query Frame = 3
Query:   66 SEMASILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSGFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVESYFFDGYFLPNLLQ--PGATAPPRDKVVIFGDGNPK-VYNKEDDIGTYTIKAVDDPRTLN 689
            +E + IL IGGTGYIGKF+VEAS KAGH TF LVRE+T+S P K + +  FK+LGV I+ GD+ +HESLVKAIKQVDVVISTVG   + DQ KII+AIKEAGNVKRF PS FG DVDR   AVEP KS +  K +IRR +EAEGIPYTY  +  F GY+LP L+Q  PG T+PPRDKV I GDGN K V NKE+DI  YTIKAVDDPRTLN
Sbjct:    3 TEKSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTILHGDLNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVDVDRT-SAVEPAKSAFAGKIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQFEPGLTSPPRDKVTILGDGNAKAVINKEEDIAAYTIKAVDDPRTLN 212          
BLAST of DR403279 vs. ExPASy Swiss-Prot
Match: IFR_CICAR (Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.270e-60
Identity = 125/215 (58.14%), Postives = 152/215 (70.70%), Query Frame = 3
Query:   81 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRES-----------TVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSGFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPK-VYNKEDDIGTYTIKAVDDPRTLN 689
            IL +G TG IG+ +V AS+KAG+PT+ L+R++             +  SK +LL  FK  GV ++ GD+ +HE+LVKAIKQVD VI T G  L+ DQVKII AIKEAGNVKRFFPS FG DVDR H AV+P +  +D KA IRR VEAEG+PYTY+  + F GYFL NL Q  AT PPRDKV+I GDGN K  Y  E D+GTYTI+A +DPRTLN
Sbjct:    7 ILVLGPTGAIGRHVVWASIKAGNPTYALIRKTPGDINKPSLVAAANPESKEELLQSFKAAGVILLEGDMNDHEALVKAIKQVDTVICTFGRLLILDQVKIIKAIKEAGNVKRFFPSEFGLDVDR-HDAVDPVRPVFDEKASIRRVVEAEGVPYTYLCCHAFTGYFLRNLAQFDATEPPRDKVIILGDGNVKGAYVTEADVGTYTIRAANDPRTLN 220          
BLAST of DR403279 vs. ExPASy Swiss-Prot
Match: IFR_MEDSA (Isoflavone reductase OS=Medicago sativa GN=IFR PE=1 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.119e-59
Identity = 122/215 (56.74%), Postives = 156/215 (72.56%), Query Frame = 3
Query:   81 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRES----------TVSGP-SKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSGFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPK-VYNKEDDIGTYTIKAVDDPRTLN 689
            IL +G TG IG+ IV AS+KAG+PT+ LVR++          T + P +K +L+D++++LGV ++ GD+ +HE+LVKAIKQVD+VI   G  L+ DQVKII AIKEAGNVK+FFPS FG DVDR H AVEP +  ++ KA IRR +EAEG+PYTY+  + F GYFL NL Q   T PPRDKVVI GDGN K  Y  E D+GT+TI+A +DP TLN
Sbjct:    7 ILILGPTGAIGRHIVWASIKAGNPTYALVRKTPGNVNKPKLITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDR-HEAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDTTDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLN 220          
BLAST of DR403279 vs. ExPASy Swiss-Prot
Match: IFR_PEA (Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.519e-57
Identity = 121/215 (56.28%), Postives = 153/215 (71.16%), Query Frame = 3
Query:   81 ILSIGGTGYIGKFIVEASVKAGHPTFVLVREST--VSGP---------SKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSGFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPK-VYNKEDDIGTYTIKAVDDPRTLN 689
            IL +G TG IG+ IV AS+KAG+PT+ LVR+++  V+ P         +K +LL +++  GV ++ GD+ +HE+LV AIKQVD VI   G  L+ DQVK+I AIKEAGNVKRFFPS FG DVDR H AVEP +  ++ KA IRR VE+EG+PYTY+  + F GYFL NL Q  AT PPRDKVVI GDGN +  Y  E D+GTYTI+A +DP TLN
Sbjct:    7 ILILGATGAIGRHIVWASIKAGNPTYALVRKTSDNVNKPKLTEAANPETKEELLKNYQASGVILLEGDINDHETLVNAIKQVDTVICAAGRLLIEDQVKVIKAIKEAGNVKRFFPSEFGLDVDR-HDAVEPVRQVFEEKASIRRVVESEGVPYTYLCCHAFTGYFLRNLAQIDATDPPRDKVVILGDGNVRGAYVTEADVGTYTIRAANDPNTLN 220          
BLAST of DR403279 vs. ExPASy Swiss-Prot
Match: IFRH_MAIZE (Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.052e-54
Identity = 112/209 (53.59%), Postives = 142/209 (67.94%), Query Frame = 3
Query:   66 SEMASILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSGFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPK-VYNKEDDIGTYTIKAVDDPRTLN 689
            SE + IL +GGTGY+G+ +V AS + GHPT  LVR++  S P+K+ LL  F++ GV ++ GD+ +  SLV A+K  DVVIS +G   +ADQ +++ AIKEAGNVKRFFPS FG DVDR  G VEP KS    K  IRRA EA GIPYTY  + FF G+ LP + Q  A  PP DK V+ GDG+ K V+ +E DI TYT+ A DDPR  N
Sbjct:    3 SEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRT-GIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDTKAVFVEEGDIATYTVLAADDPRAEN 210          
BLAST of DR403279 vs. ExPASy Swiss-Prot
Match: IFRH_LUPAL (Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.198e-48
Identity = 103/212 (48.58%), Postives = 138/212 (65.09%), Query Frame = 3
Query:   75 ASILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVG------HALLADQVKIIAAIKEAGNVKRFFPSGFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPK-VYNKEDDIGTYTIKAVDDPRTLN 689
            + +L +GGTGY+G+ IV+AS++ GH TF+L R        K Q+L  FK  G  +V     +H+SLV A+K VDVVI T+       H LL  Q+K++ AIK+AGN+KRF PS FG D   +  A+EP + T+D K  +R+A+E   IP+TY+ +  F GYF  NL Q     PPRDKV+++GDGN K VY  EDD+ TYTIK +DDPRTLN
Sbjct:    4 SKVLVVGGTGYVGRRIVKASLEHGHETFILQRPEIGLDIEKLQILLSFKKQGAILVEASFSDHKSLVDAVKLVDVVICTMSGVHFRSHNLLT-QLKLVEAIKDAGNIKRFLPSEFGMDPALMGHALEPGRVTFDEKMTVRKAIEEANIPFTYISANCFAGYFAGNLSQMKTLLPPRDKVLLYGDGNVKPVYMDEDDVATYTIKTIDDPRTLN 214          
BLAST of DR403279 vs. ExPASy Swiss-Prot
Match: IGS1_PETHY (Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.129e-44
Identity = 99/205 (48.29%), Postives = 133/205 (64.88%), Query Frame = 3
Query:   81 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRE-STVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSGFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPK-VYNKEDDIGTYTIKAVDDPRTLN 689
            IL +G TGY+GK++V+AS+  GHPT+  V      S  SK QLL  F++LGV I  G++  H+ LV   K+VD+VIST+      +Q+K+I AIKEAGN+KRF PS FGN+VDRV  A+   ++  D K KIRRA EA GIP+T+V +     YF+  LL P   +   ++V I+G G+ K V N E+D+  YTIKA DDPR  N
Sbjct:    8 ILILGATGYLGKYMVKASISLGHPTYAYVMPLKKNSDDSKLQLLKEFESLGVTIFYGELSEHDKLVAVFKEVDIVISTLAVPQYLEQLKVIEAIKEAGNIKRFVPSEFGNEVDRVR-ALPRFQAVLDNKKKIRRATEAAGIPFTFVSANSLTAYFVDYLLHPRQKS---EQVTIYGSGDAKAVLNYEEDVAAYTIKAADDPRAAN 208          
BLAST of DR403279 vs. ExPASy Swiss-Prot
Match: EGS1_OCIBA (Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.925e-44
Identity = 98/206 (47.57%), Postives = 133/206 (64.56%), Query Frame = 3
Query:   75 ASILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSGFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPK-VYNKEDDIGTYTIKAVDDPRTLN 689
            + IL  GGTGYIG  +V+ S+K GHPT+V  R ++    SK+ LLD F++LG  IV G++  HE LV+ +K+VDVVIS +    + DQ KI+ AIK AGN+KRF PS FG + DR++ A+ P ++  + K  IRRA+E   IPYTYV +  F  YF+  LL+P     P+D++ ++G G  K   N E DIG YTIK   DPR LN
Sbjct:    8 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS----SKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRIN-ALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRP---YDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALN 205          
The following BLAST results are available for this feature:
BLAST of DR403279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
IFRH_SOLTU2.104e-8376.21Isoflavone reductase homolog OS=Solanum tuberosum ... [more]
IFRH_TOBAC1.848e-7165.71Isoflavone reductase homolog A622 OS=Nicotiana tab... [more]
IFRH_ARATH9.170e-7167.30Isoflavone reductase homolog P3 OS=Arabidopsis tha... [more]
IFR_CICAR4.270e-6058.14Isoflavone reductase OS=Cicer arietinum GN=IFR PE=... [more]
IFR_MEDSA2.119e-5956.74Isoflavone reductase OS=Medicago sativa GN=IFR PE=... [more]
IFR_PEA1.519e-5756.28Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 ... [more]
IFRH_MAIZE2.052e-5453.59Isoflavone reductase homolog IRL OS=Zea mays GN=IR... [more]
IFRH_LUPAL2.198e-4848.58Isoflavone reductase homolog OS=Lupinus albus PE=2... [more]
IGS1_PETHY1.129e-4448.29Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 P... [more]
EGS1_OCIBA1.925e-4447.57Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244H06 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403279 ID=DR403279; Name=DR403279; organism=Citrus sinensis; type=EST; length=689bp
GCCGGGGGAATAATAATAATAATAATAATAATNNNNANNNNCTCCGGAAT
TGAACTGAACGAGTTTCAGAAATGGCATCGATTCTATCCATCGGCGGGAC
AGGGTATATCGGTAAATTCATCGTGGAAGCAAGCGTGAAAGCCGGCCACC
CGACGTTCGTGCTCGTGAGGGAATCCACAGTCTCAGGTCCTTCCAAATCT
CAGCTCCTCGACCACTTCAAAAACCTCGGCGTCAAAATCGTTGTCGGAGA
TGTTTTGAATCACGAGAGTTTGGTGAAGGCGATAAAACAAGTGGACGTGG
TGATATCGACAGTCGGTCACGCTTTATTAGCCGATCAGGTCAAGATTATT
GCTGCCATTAAAGAAGCCGGTAACGTTAAGAGATTCTTCCCATCGGGATT
TGGAAATGATGTTGATCGAGTCCATGGCGCCGTGGAGCCAACAAAATCGA
CGTATGACGTAAAGGCGAAAATCCGCCGAGCCGTTGAGGCAGAAGGCATT
CCGTACACTTACGTAGAATCTTATTTTTTTGATGGCTACTTCCTCCCTAA
TTTGTTGCAGCCTGGGGCCACTGCCCCCCCTAGGGATAAGGTTGTCATCT
TCGGCGATGGAAATCCAAAAGTTTATAACAAGGAGGATGATATTGGAACC
TACACTATCAAAGCAGTTGATGATCCGAGAACCTTGAAC
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