DR403274

Overview
NameDR403274
Unique NameDR403274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:50..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.402e-86
Identity = 142/187 (75.94%), Postives = 162/187 (86.63%), Query Frame = 3
Query:   90 APEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 650
            APE  HP+ AFGWAA+DTSG LSP  FSRRATGE+DVTFKV +CGICHSDLH IKNEWGN +YP +PGHEIVGVVTEVG+KV  FKVGDKVGVGCMVGSC SC+SC   LENYCPK+I+TY + Y+DGT+TYGGYSDIMV +EHF VRIP+   LDATAPLLCAG+TVYSPL+ + LDKPG+H+GVV
Sbjct:    5 APENVHPQKAFGWAARDTSGTLSPLKFSRRATGEQDVTFKVLYCGICHSDLHYIKNEWGNAVYPAIPGHEIVGVVTEVGNKVQNFKVGDKVGVGCMVGSCRSCESCENHLENYCPKMILTYGSTYYDGTLTYGGYSDIMVVEEHFAVRIPDNMALDATAPLLCAGVTVYSPLKHFELDKPGLHIGVV 191          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 1.831e-86
Identity = 145/187 (77.54%), Postives = 163/187 (87.17%), Query Frame = 3
Query:   90 APEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 650
            A EQEH K A GWAA+D+SGVLSPF+F RR TGEKDVTFKV +CGICHSDLHM+KNEWG + YP+VPGHEIVG VTEVGSKV KFKVGD+VGVGC+VGSC SC++C   LENYCPK I+TY  KY+DG+ TYGGYSDIMVADEHF+VRIP+  PLD  APLLCAGIT YSPLR++GLDKPGMHVGVV
Sbjct:    2 AIEQEHRKKASGWAARDSSGVLSPFNFYRRETGEKDVTFKVLYCGICHSDLHMVKNEWGFSTYPLVPGHEIVGEVTEVGSKVQKFKVGDRVGVGCIVGSCRSCENCTDHLENYCPKQILTYGAKYYDGSTTYGGYSDIMVADEHFIVRIPDNLPLDGAAPLLCAGITTYSPLRYFGLDKPGMHVGVV 188          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 8.800e-81
Identity = 136/189 (71.96%), Postives = 155/189 (82.01%), Query Frame = 3
Query:   81 MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV 647
            M ++PE EHP  A GWAA D SG  SPF+FSRRATGE+DV F+V +CG+CHSDLHM+KNEWG T YPIVPGHEIVG+VTEVGSKV K K+GDKVGVG +VGSC  CD C+ DLENYC K I+TY   Y DGTI  GGYSDIMVADEHF++R PE  PLDA APLLCAGIT YSPL+++GLDKPG+ VGV
Sbjct:    1 MAKSPETEHPVKALGWAATDNSGTFSPFNFSRRATGERDVQFRVLYCGVCHSDLHMVKNEWGVTHYPIVPGHEIVGIVTEVGSKVEKVKIGDKVGVGVLVGSCRQCDQCSNDLENYCYKQILTYGAPYLDGTIARGGYSDIMVADEHFIIRWPENFPLDAGAPLLCAGITTYSPLKYFGLDKPGLRVGV 189          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 6.307e-79
Identity = 134/180 (74.44%), Postives = 152/180 (84.44%), Query Frame = 3
Query:  111 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 650
            K AFG AAKD SGVLSPF F+RR TGEKDV FKV  CGICHSDLHM+KNEWG + YP+VPGHEIVGVVTEVG+KV+KFK G+KVGVGC+V SC SCDSC   +ENYCPK I TY   Y+D TITYGGYSD MV +E FV+RIP+  PLDA APLLCAGITVYSP++++GLDKPGMH+GVV
Sbjct:    7 KEAFGLAAKDNSGVLSPFSFTRRETGEKDVRFKVLFCGICHSDLHMVKNEWGMSTYPLVPGHEIVGVVTEVGAKVTKFKTGEKVGVGCLVSSCGSCDSCTEGMENYCPKSIQTYGFPYYDNTITYGGYSDHMVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKPGMHIGVV 186          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 5.903e-77
Identity = 131/190 (68.95%), Postives = 153/190 (80.53%), Query Frame = 3
Query:   81 MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 650
            M ++ E EHP  AFGWAA+DT+G+LSPF FSRRATGEKDV  KV  CG+CHSD HMI N WG T YPIVPGHEIVGVVTEVGSKV K KVGD VG+GC+VGSC SC+SC  + E++C   I TY + Y DGT+T+GGYSD MVADEHF++R P+  PLD+ APLLCAGIT YSPL++YGLDKPG  +GVV
Sbjct:    1 MAKSSEIEHPVKAFGWAARDTTGLLSPFKFSRRATGEKDVRLKVLFCGVCHSDHHMIHNNWGFTTYPIVPGHEIVGVVTEVGSKVEKVKVGDNVGIGCLVGSCRSCESCCDNRESHCENTIDTYGSIYFDGTMTHGGYSDTMVADEHFILRWPKNLPLDSGAPLLCAGITTYSPLKYYGLDKPGTKIGVV 190          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 275.018 bits (702), Expect = 2.321e-73
Identity = 128/180 (71.11%), Postives = 145/180 (80.56%), Query Frame = 3
Query:  111 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 650
            K AFG AAKD SG+LSPF FSRRATGEKDV FKV  CGICH+DL M KNEWG T YP+VPGHEIVGVVTEVG+KV KF  GDKVGVG M GSC SCDSC    ENYCPK+I+T   K  D T+T+GGYSD MV  E F++RIP+  PLD  APLLCAG+TVYSP++++GLDKPGMH+GVV
Sbjct:    7 KEAFGLAAKDESGILSPFSFSRRATGEKDVRFKVLFCGICHTDLSMAKNEWGLTTYPLVPGHEIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKMILTSGAKNFDDTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGLDKPGMHIGVV 186          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 2.837e-71
Identity = 124/186 (66.67%), Postives = 151/186 (81.18%), Query Frame = 3
Query:   96 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDAT-APLLCAGITVYSPLRFYGLDKPGMHVGVV 650
            E EHP+ AFGWAA+D+SG+LSPF+FSRR  GE+DV  +V +CGICH+DLHM KN++GN+IYP VPGHE++G+V EVGSKV K+KVGDKVGVG  V SC SC +C  +LENYCPK I+T  +K+ DGT TYGGYSD MV DEHFV RIPEG PLD   +  LC G + +SPL++YGLDKPG+HVGVV
Sbjct:    7 EFEHPRKAFGWAARDSSGLLSPFNFSRRDIGEEDVALEVLYCGICHTDLHMAKNDFGNSIYPYVPGHEVIGIVAEVGSKVEKYKVGDKVGVGYFVESCRSCQNCIDNLENYCPKHILTQGDKHIDGTTTYGGYSDSMVVDEHFVTRIPEGLPLDGCGSSSLCWGYS-HSPLKYYGLDKPGLHVGVV 191          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.408e-70
Identity = 118/189 (62.43%), Postives = 148/189 (78.31%), Query Frame = 3
Query:   81 MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV 647
            M ++PE E P  AFGWAA+DTSG LSPFHFSRR  G+ DV+ K+ +CG+CHSDLH +KN+WG T YP+VPGHEIVGVVT+VG  V KF+VGD VGVG +V SC +C++C  DLE YCPK + TY N  + GT TYGGYSD +V  + +VV+ P+  PLDA APLLCAGITVYSP+++YG+ +PG H+GV
Sbjct:    1 MAKSPETELPLKAFGWAARDTSGTLSPFHFSRRENGDDDVSVKILYCGVCHSDLHTLKNDWGFTTYPVVPGHEIVGVVTKVGINVKKFRVGDNVGVGVIVESCQTCENCNQDLEQYCPKPVFTY-NSPYKGTRTYGGYSDFVVVHQRYVVQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGV 188          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 264.233 bits (674), Expect = 4.097e-70
Identity = 116/189 (61.38%), Postives = 144/189 (76.19%), Query Frame = 3
Query:   81 MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV 647
            M ++PE EHP   FGW A+D SGVLSPFHFSRR  GE DVT K+  CG+CH+DLH IKN+WG + YP+VPGHEIVG+ T+VG  V+KFK GD+VGVG + GSC SC+SC  DLENYCP++  TY     DGT  YGGYS+ +V D+ FV+R PE  P D+ APLLCAGITVYSP+++YG+ + G H+GV
Sbjct:    1 MAKSPETEHPNKVFGWGARDKSGVLSPFHFSRRDNGENDVTVKILFCGVCHTDLHTIKNDWGYSYYPVVPGHEIVGIATKVGKNVTKFKEGDRVGVGVISGSCQSCESCDQDLENYCPQMSFTYNAIGSDGTKNYGGYSENIVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGMTEAGKHLGV 189          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.033e-69
Identity = 122/167 (73.05%), Postives = 138/167 (82.63%), Query Frame = 3
Query:  150 VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 650
            +LSPF FSRRATG+ DV FKV +CG+CHSDLHM+KNEWG T YPIVPGHEIVG VTEVGSKV KFKVGD VGVGC+VGSC SC++C  D EN C K + TYA    DG+ITYGGY+D MVAD+HFV+R PE  PLD+ APLLCAGIT YSPLR++GLDKPG  VGVV
Sbjct:    1 ILSPFKFSRRATGDNDVRFKVLYCGVCHSDLHMVKNEWGMTTYPIVPGHEIVGRVTEVGSKVEKFKVGDAVGVGCLVGSCLSCENCDDDSENNCAKQVQTYAFTNVDGSITYGGYADSMVADQHFVLRWPENLPLDSGAPLLCAGITTYSPLRYHGLDKPGTKVGVV 167          
The following BLAST results are available for this feature:
BLAST of DR403274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
MTDH_MESCR1.402e-8675.94Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
MTDH_FRAAN1.831e-8677.54Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
GEDH1_OCIBA8.800e-8171.96Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
CADH8_ARATH6.307e-7974.44Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
MTDH_APIGR5.903e-7768.95Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]
CADH7_ARATH2.321e-7371.11Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
MTDH3_STYHU2.837e-7166.67Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
MTDH_MEDSA1.408e-7062.43Probable mannitol dehydrogenase OS=Medicago sativa... [more]
CADH9_ARATH4.097e-7061.38Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
MTDH_PETCR2.033e-6973.05Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244G17 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244G17 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403274 ID=DR403274; Name=DR403274; organism=Citrus sinensis; type=EST; length=652bp
GGGGATCGCAACTTGTTTGTTTAATGCCCTGGACGTCAACGTAAGCCAAC
AAACACCGATATNATTAAATTCATTCTGAAATGGGGCAAGCACCGGAGCA
AGAGCACCCTAAGAACGCCTTTGGATGGGCTGCCAAGGACACTTCTGGCG
TTCTCTCCCCCTTTCACTTCTCCAGAAGAGCAACGGGAGAGAAGGATGTG
ACATTCAAAGTAACTCACTGTGGGATATGCCATTCAGATCTTCACATGAT
AAAAAATGAATGGGGCAATACCATTTACCCAATCGTCCCCGGACATGAGA
TTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGTGAGTAAATTCAAAGTC
GGAGACAAAGTGGGAGTAGGATGCATGGTGGGATCATGCCACTCTTGTGA
TAGCTGCGCCATTGATCTTGAGAACTACTGCCCCAAAGTTATAATGACCT
ATGCCAACAAGTACCATGATGGAACCATCACATACGGAGGCTACTCTGAC
ATTATGGTTGCCGATGAGCACTTTGTGGTCCGTATTCCTGAAGGCACACC
ACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGTATCACAGTCTACAGTC
CGTTGAGATTCTATGGACTCGACAAGCCTGGTATGCATGTGGGTGTTGTC
GG
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