DR403269

Overview
NameDR403269
Unique NameDR403269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1283 contig Csv1_Contig1283:120..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.407e-42
Identity = 95/153 (62.09%), Postives = 101/153 (66.01%), Query Frame = 3
Query:   81 MSLIPSIFGNR--SVFDPFSSDVWAPL------GSSSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            MSLIPS FG R  SVFDPFS DVW P        S S E S F S +VD KET EAHVFKAD+PGL          DGRVLQISGER+VEKEDKND WHRVER  GK VRRFRLPENAK+DQVKASMENGVL               +I I+G
Sbjct:    1 MSLIPSFFGGRRSSVFDPFSLDVWDPFKDFPFPSSLSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.097e-41
Identity = 95/154 (61.69%), Postives = 107/154 (69.48%), Query Frame = 3
Query:   81 MSLIPSIFGNR---SVFDPFSSDVWAP---LG---SSSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            MSLIP IFG+R   SVFDPFS DV+ P   LG   S+S E S FA+ ++D KET EAHVFKADLPGL          + RVLQISGER+VEKEDKND WHRVER  GKF+RRFRLPENAK+DQVKASMENGVL               SI+I+G
Sbjct:    1 MSLIPRIFGDRRSTSVFDPFSIDVFDPFKELGFTVSNSGETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVNNPDVKSIEISG 154          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.774e-40
Identity = 91/154 (59.09%), Postives = 106/154 (68.83%), Query Frame = 3
Query:   81 MSLIPSIFGNR---SVFDPFSSDVWAPL------GSSSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            MSLIP IFG+R   S+FDPFS DV+ P       G++S E S FA+ ++D KET EAHVFKADLPGL          + RVLQISGER++EKEDKNDKW RVER  GKF+RRFRLPENAK+DQVKASMENGVL               SI+I+G
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPGTNSGETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEMKKPDVKSIEISG 154          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.741e-40
Identity = 93/158 (58.86%), Postives = 101/158 (63.92%), Query Frame = 3
Query:   81 MSLIPSIFGNR--SVFDPFSSDVWAPL-----------GSSSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            MSLIPS F  R  +VFDPFS DVW PL            S   E   F S +VD KET EAHVFKADLPGL          D RVLQISGERSVEKEDKND+WHRVER  GKF+RRFRLPENAK+D+VKASMENGVL               SI+I+G
Sbjct:    1 MSLIPSFFSGRRSNVFDPFSLDVWDPLKDFPFSNSSPSASFPRENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPKEEIKKAEVKSIEISG 158          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.150e-39
Identity = 91/158 (57.59%), Postives = 101/158 (63.92%), Query Frame = 3
Query:   81 MSLIPSIFGNR--SVFDPFSSDVWAPL-----------GSSSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            MSLIPS FG R  +VFDPFS DVW P             S   E S F S +VD KET EAHVFKADLPG+          D RVLQISGERSVEKEDKND+WHR+ER  GKF+RRFRLPENAK+DQVKA+MENGVL               +I I+G
Sbjct:    1 MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.961e-39
Identity = 89/154 (57.79%), Postives = 104/154 (67.53%), Query Frame = 3
Query:   81 MSLIPSIFGNR---SVFDPFSSDVWAPL------GSSSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            MSLIP IFG+R   S+FDPFS DV+ P        ++S E S FA+ ++D KET E HVFK DLPGL          + RVLQISGER+VEKEDKNDKWHR+ER  GKF+RRFRLPENAK+DQVKASMENGVL               SI+I+G
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPSTNSGESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVKKPEVKSIEISG 154          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.562e-39
Identity = 89/154 (57.79%), Postives = 100/154 (64.94%), Query Frame = 3
Query:   81 MSLIPSIFGNR--SVFDPFSSDVW-------APLGSSSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            MSLIP  FG R  +VFDPFS D+W        P  S S E S F S +VD KET EAHVFKAD+PGL          D RVLQISGER+VEKEDKND WHRVER  GKF RRFRLPENAK+++VKASMENGVL               +I+I+G
Sbjct:    1 MSLIPGFFGGRRSNVFDPFSLDMWDPFKDFHVPTSSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPKEEVKKPDVKAIEISG 154          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.346e-39
Identity = 89/153 (58.17%), Postives = 102/153 (66.67%), Query Frame = 3
Query:   81 MSLIPSIFGNR--SVFDPFSSDVWAPLG------SSSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            MSLIPSIFG R  +VFDPFS DVW P        S S E S F + +VD KET EAHVF+AD+PGL          D RVLQISGER++EKEDKND WHRVER  G F+RRFRLPENAK++QVKASMENGVL               +I+I+G
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSLDVWDPFKDFHFPTSLSAENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.370e-39
Identity = 89/161 (55.28%), Postives = 104/161 (64.60%), Query Frame = 3
Query:   81 MSLIPSIFGNR--SVFDPFSSDVWAPL------------GSSSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG*N 521
            MSLIPSIFG R  +VFDPFS D+W P              S++ +V+ F +A+VD KET EAHVFKADLPGL          D  VLQISGERS E E+KNDKWHRVER  GKF+RRFRLPENAK+++VKA+MENGVL               SI I+G N
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISGAN 161          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.453e-39
Identity = 91/161 (56.52%), Postives = 104/161 (64.60%), Query Frame = 3
Query:   81 MSLIPSIFGNR--SVFDPFSSDVWAP---------LGSSS-----NEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            MSLIP+ FG R  +VFDPFS DVW P         L S+S      E S F S +VD KET EAHVFKAD+PGL          D +VLQISGER+VEKEDKND WHRVER  GKF+RRFRLPENAK++QVKASMENGVL               +I+I+G
Sbjct:    1 MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161          
The following BLAST results are available for this feature:
BLAST of DR403269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
HSP11_SOYBN9.407e-4262.0917.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_SOLPE6.097e-4161.6917.6 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_SOLPE1.774e-4059.0917.7 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_PEA6.741e-4058.8618.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HSP12_MEDSA1.150e-3957.5918.2 kDa class I heat shock protein OS=Medicago sa... [more]
HSP11_SOLLC1.961e-3957.7917.8 kDa class I heat shock protein OS=Solanum lyc... [more]
HSP14_SOYBN2.562e-3957.7917.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP13_SOYBN3.346e-3958.1717.5 kDa class I heat shock protein OS=Glycine max... [more]
HS181_ARATH4.370e-3955.2818.1 kDa class I heat shock protein OS=Arabidopsis... [more]
HSP16_SOYBN7.453e-3956.5218.5 kDa class I heat shock protein OS=Glycine max... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244G09 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403269 ID=DR403269; Name=DR403269; organism=Citrus sinensis; type=EST; length=708bp
GGGGAGTAAAGAGTGAAGACCCAATTGATAAATAAGCAAACGCTTTCGAA
GAAAGTGCTCGTCGCTTTGATTAAGCAAAAATGTCTTTGATTCCATCTAT
ATTCGGAAACAGGAGCGTGTTCGACCCATTTTCCTCGGACGTCTGGGCGC
CCCTTGGCTCCTCCAGCAACGAGGTGTCAACATTCGCCAGTGCTCAAGTC
GATCGGAAAGAAACCCGGGAAGCTCATGTTTTCAAGGCGGATCTTCCGGG
GCTCAAGAAAGAGGAAGTGAAGGTTGAAGTTGAGGACGGGAGAGTCCTTC
AGATCAGCGGTGAGAGGAGCGTCGAGAAGGAAGACAAGAACGACAAATGG
CACCGTGTTGAGAGGGGCCGCGGCAAGTTCGTGAGGAGGTTCCGGTTGCC
TGAGAATGCCAAGATCGATCAAGTTAAGGCATCAATGGAGAATGGTGTCC
TCACCGTCACTGTTCCCAAAGTGGAGGAGAAGAAGCCTGAGGTCAAATCC
ATTCAGATCACTGGTTGAAACTCTCCGTTAATTGCAGCCTTTTTAATTTG
GTTCTTGTTTTGTTCTGTGTGTTAATGAACGATGTGCGATTGCTGTTAAG
TGTGTCGCATACTTTTGTTCATGTAATGTGTTGTCGACTGCTTTTTTAAG
TAATAAAAATATGTTGTTTTCTTGATCCAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA
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