DR403266

Overview
NameDR403266
Unique NameDR403266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403266 vs. ExPASy Swiss-Prot
Match: RFS5_ARATH (Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana GN=RFS5 PE=1 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.549e-60
Identity = 114/185 (61.62%), Postives = 143/185 (77.30%), Query Frame = 1
Query:    4 GAFNCQGGGWCREARRNTCASQFSQKVTAKTNPKDIEWNSGKNPISIEGVQVFAMYLQEAKKLVISKPYENIEISLEPFSFELITVSPVTLLPGGTSPSVQFAPIGLVNMLNTGGAIQSLSYDDDENSVEIGVKGSGEMRVFASEKPRACKIDGNEVAFEYEGHMVAIQVPWSSPSGLSVIEYLF 558
            GAFNCQGGGWCRE RRN C S+    +TA T+PKD+EWNSG +PISI  V+ FA++L ++KKL++S   +++E++LEPF FELITVSPV  + G    SV+FAPIGLVNMLNT GAI+SL Y+D+  SVE+GV G+GE RV+AS+KP +C IDG  V F YE  MV +QVPWS P GLS I+YLF
Sbjct:  604 GAFNCQGGGWCRETRRNQCFSECVNTLTATTSPKDVEWNSGSSPISIANVEEFALFLSQSKKLLLSGLNDDLELTLEPFKFELITVSPVVTIEGN---SVRFAPIGLVNMLNTSGAIRSLVYNDE--SVEVGVFGAGEFRVYASKKPVSCLIDGEVVEFGYEDSMVMVQVPWSGPDGLSSIQYLF 783          
BLAST of DR403266 vs. ExPASy Swiss-Prot
Match: RFS_PEA (Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.357e-56
Identity = 106/185 (57.30%), Postives = 136/185 (73.51%), Query Frame = 1
Query:    4 GAFNCQGGGWCREARRNTCASQFSQKVTAKTNPKDIEWNSGKNPISIEGVQVFAMYLQEAKKLVISKPYENIEISLEPFSFELITVSPVTLLPGGTSPSVQFAPIGLVNMLNTGGAIQSLSYDDDENSVEIGVKGSGEMRVFASEKPRACKIDGNEVAFEYEGHMVAIQVPWSSPSGLSVIEYLF 558
            G FNCQGGGWC E RRN  AS+FS  VT   +P+DIEW +GK P+ I+GV VFA+Y  + KKL + K  + +E+SLEPFSFEL+TVSP+ +    +   +QFAPIGLVNMLN+GGA+QSL +DD  + V+IGV+G GE+ VFASEKP  CKIDG  V F+YE  MV +Q+ W   S LS++E+LF
Sbjct:  617 GLFNCQGGGWCPETRRNKSASEFSHAVTCYASPEDIEWCNGKTPMDIKGVDVFAVYFFKEKKLSLMKCSDRLEVSLEPFSFELMTVSPLKVF---SKRLIQFAPIGLVNMLNSGGAVQSLEFDDSASLVKIGVRGCGELSVFASEKPVCCKIDGVSVEFDYEDKMVRVQILWPGSSTLSLVEFLF 798          
BLAST of DR403266 vs. ExPASy Swiss-Prot
Match: RFS_ORYSJ (Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica GN=RFS PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.540e-43
Identity = 89/190 (46.84%), Postives = 126/190 (66.32%), Query Frame = 1
Query:    4 GAFNCQGGGWCREARRNTCASQFSQKVTAKTNPKDIEWNSGKNPISIEGVQVFAMYLQEAKKLVISKPYENIEISLEPFSFELITVSPVTLLPGGTSP--SVQFAPIGLVNMLNTGGAIQSL--SYDDDENSVEIGVKGSGEMRVFASEKPRACKIDGNEVAFEYEGHMVAIQVPWS-SPSGLSVIEYLF 558
            GAFNCQGGGW REARRN CA+ FS  VTA+ +P D+EW+ G       G   FA+Y  EA+KL + +  E++E++LEPF++EL+ V+PV  +    SP   + FAPIGL NMLN GGA+Q    +  D + + E+ VKG+GEM  ++S +PR CK++G +  F+YE  +V + VPW+ S   LS +EY +
Sbjct:  602 GAFNCQGGGWSREARRNMCAAGFSVPVTARASPADVEWSHGGG-----GGDRFAVYFVEARKLQLLRRDESVELTLEPFTYELLVVAPVRAI---VSPELGIGFAPIGLANMLNAGGAVQGFEAARKDGDVAAEVAVKGAGEMVAYSSARPRLCKVNGQDAEFKYEDGIVTVDVPWTGSSKKLSRVEYFY 783          
BLAST of DR403266 vs. ExPASy Swiss-Prot
Match: STSYN_PEA (Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.282e-22
Identity = 62/188 (32.98%), Postives = 104/188 (55.32%), Query Frame = 1
Query:    4 GAFNCQGGGWCREARRNTCASQFSQKVTAKTNPKDIEWNSGKNPISIEGVQVFAMYLQEAKKL-VISKPYENIEISLEPFSFELITVSPVTLLPGGTSPSVQFAPIGLVNMLNTGGAIQSLSYDDDENSVEIGVKGSGEMRVFASEKPRACKIDGNEVAFEYEGH-MVAIQVPW-SSPSGLSVIEYLF 558
            GAFNCQG GW    ++     +  + +    +  ++EW+  +    +   + + +YL +A++L +++   E I+ +++P +FEL +  PVT L GG    ++FAPIGL NM N+GG +  L Y    N  +I VKG G    ++SE P+  +++G EV FE+ G   + + VPW     G+S +E  F
Sbjct:  672 GAFNCQGAGWDPIMQKFRGFPECYKPIPGTVHVTEVEWDQKEETSHLGKAEEYVVYLNQAEELSLMTLKSEPIQFTIQPSTFELYSFVPVTKLCGG----IKFAPIGLTNMFNSGGTVIDLEYVG--NGAKIKVKGGGSFLAYSSESPKKFQLNGCEVDFEWLGDGKLCVNVPWIEEACGVSDMEIFF 853          
BLAST of DR403266 vs. ExPASy Swiss-Prot
Match: RFS6_ARATH (Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana GN=RFS6 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.852e-21
Identity = 56/162 (34.57%), Postives = 88/162 (54.32%), Query Frame = 1
Query:    4 GAFNCQGGGWCREARRNTCASQFSQKVTAKTNPKDIEWNSGKNPISIEGVQVFAMYLQEAKKLVISKPYENIEISLEPFSFELITVSPVTLLPGGTSPSVQFAPIGLVNMLNTGGAIQSLSYDDDENSVEIGVKGSGEMRVFASEKPRACKIDGNEVAFEYE 489
            G +NCQG  W    R+N      +  +T     +D+   S  +          A+Y Q   +L++     ++ +SL+    E+ TVSP++ L  G S    FAPIGLVNM N+GGAI+ L Y+ ++  V + VKG G+   ++S KP+ C ++ NE+AFEY+
Sbjct:  565 GVYNCQGAAWSSTERKNIFHQTKTDSLTGSIRGRDVHSISEASTDPTTWNGDCAVYSQSRGELIVMPYNVSLPVSLKIREHEIFTVSPISHLVDGVS----FAPIGLVNMYNSGGAIEGLRYEAEKMKVVMEVKGCGKFGSYSSVKPKRCVVESNEIAFEYD 722          
BLAST of DR403266 vs. ExPASy Swiss-Prot
Match: RFS4_ARATH (Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis thaliana GN=RFS4 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.388e-21
Identity = 65/194 (33.51%), Postives = 103/194 (53.09%), Query Frame = 1
Query:    4 GAFNCQGGGWCREARRNTCASQFSQKVTAKTNPKDIEWNSGKNPISIEGVQV-----FAMYLQEAKK-LVISKPYENIEISLEPFSFELITVSPVTLLPGGTSPSVQFAPIGLVNMLNTGGAIQSLSYDDDENSVEIGVKGSGEMRVFASEKPRACKIDGNEVAFEYEGH--MVAIQVPWSSPS-GLSVIEYLF 558
            G FNCQG GW  E  R     +    V+   +  DIEW+  +NP    G QV     + +Y Q++++ L ++   E ++I+LEP +F+L++  PVT L    S  V+F P+GL+NM N  G +Q +    D NS+ + VKG G    ++S  P  C ++  E  F++E     ++  VPW   S G+S + + F
Sbjct:  690 GTFNCQGAGWSPEEHRFKGYKECYTTVSGTVHVSDIEWD--QNP-EAAGSQVTYTGDYLVYKQQSEEILFMNSKSEAMKITLEPSAFDLLSFVPVTEL---VSSGVRFVPLGLINMFNCVGTVQDMKVTGD-NSIRVDVKGEGRFMAYSSSAPVKCYLNDKEAEFKWEEETGKLSFFVPWVEESGGISHLSFTF 876          
BLAST of DR403266 vs. ExPASy Swiss-Prot
Match: RFS1_ARATH (Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.051e-17
Identity = 52/165 (31.52%), Postives = 86/165 (52.12%), Query Frame = 1
Query:    4 GAFNCQGGGWCREARRNTCASQFSQKVTAKTNPKDIEWNSGKNPISIEGVQVFAMYLQEAKKLVISKPYENIEISLEPFSFELITVSPVTLLPGGTSPSVQFAPIGLVNMLNTGGAIQSLSYDDDENS--VEIGVKGSGEMRVFAS-EKPRACKIDGNEVAFEYE 489
            G FNCQG GWC+  +R     Q    ++      D+ +          G  +   +L+   +LV      ++ ++L P  +E+ TV PV     G+    +FAP+GL+ M N+GGAI SL YDD+     V + ++GSG + V++S  +PR+  +D ++V + YE
Sbjct:  571 GVFNCQGAGWCKNEKRYLIHDQEPGTISGCVRTNDVHYLHKVAAFEWTGDSIVYSHLRG--ELVYLPKDTSLPVTLMPREYEVFTVVPVKEFSDGS----KFAPVGLMEMFNSGGAIVSLRYDDEGTKFVVRMKLRGSGLVGVYSSVRRPRSVTVDSDDVEYRYE 729          
BLAST of DR403266 vs. ExPASy Swiss-Prot
Match: RFS2_ARATH (Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13
Identity = 50/198 (25.25%), Postives = 90/198 (45.45%), Query Frame = 1
Query:    4 GAFNCQGGGWCREARRNTCASQFSQKVTAKTNPKDIEWNSGKNPISIEGVQVFAMYLQEAKKLVISKPYENIEISLEPFSFELITVSPVTLLPGGTSPSVQFAPIGLVNMLNTGGAIQSLS-----------YDDDENS--------------VEIGVKGSGEMRVFASEKPRACKIDGNEVAFEYEGH--MVAIQVP 516
            G FNCQG GWC+E ++N         +T      D +  S        G  +  +Y   + ++V      +I ++L+   +EL  +SP+  +    + ++ FAPIGLV+M N+ GAI+S+            +D + +S              V + V+G G    ++S++P  C ++  E  F Y+    +V + +P
Sbjct:  567 GVFNCQGAGWCKETKKNQIHDTSPGTLTGSIRADDADLISQVAGEDWSGDSI--VYAYRSGEVVRLPKGASIPLTLKVLEYELFHISPLKEI----TENISFAPIGLVDMFNSSGAIESIDINHVTDKNPEFFDGEISSASPALSDNRSPTALVSVSVRGCGRFGAYSSQRPLKCAVESTETDFTYDAEVGLVTLNLP 758          
The following BLAST results are available for this feature:
BLAST of DR403266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
RFS5_ARATH1.549e-6061.62Probable galactinol--sucrose galactosyltransferase... [more]
RFS_PEA1.357e-5657.30Galactinol--sucrose galactosyltransferase OS=Pisum... [more]
RFS_ORYSJ6.540e-4346.84Galactinol--sucrose galactosyltransferase OS=Oryza... [more]
STSYN_PEA1.282e-2232.98Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 S... [more]
RFS6_ARATH1.852e-2134.57Probable galactinol--sucrose galactosyltransferase... [more]
RFS4_ARATH5.388e-2133.51Probable galactinol--sucrose galactosyltransferase... [more]
RFS1_ARATH8.051e-1731.52Probable galactinol--sucrose galactosyltransferase... [more]
RFS2_ARATH1.856e-1325.25Probable galactinol--sucrose galactosyltransferase... [more]
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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244G06 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244G06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403266 ID=DR403266; Name=DR403266; organism=Citrus sinensis; type=EST; length=713bp
GGGGGGGCATTTAACTGCCAAGGAGGAGGCTGGTGCAGGGAAGCCCGACG
CAACACATGTGCCTCACAATTTTCACAAAAGGTGACAGCCAAGACCAACC
CAAAAGACATTGAATGGAACAGTGGCAAGAACCCAATTTCCATTGAAGGG
GTTCAAGTCTTTGCCATGTACTTGCAAGAAGCCAAGAAGCTCGTTATCTC
CAAGCCATATGAAAACATTGAGATATCATTGGAGCCATTCAGTTTTGAGC
TCATCACTGTGTCTCCTGTGACTCTGCTGCCTGGAGGAACATCGCCATCC
GTGCAGTTTGCTCCCATTGGCCTGGTGAACATGCTCAACACCGGCGGCGC
AATCCAGTCTTTGTCCTACGATGATGATGAGAATTCAGTGGAAATTGGAG
TGAAGGGAAGTGGTGAAATGAGAGTCTTTGCTTCTGAGAAACCAAGAGCT
TGCAAGATTGATGGAAACGAAGTTGCATTTGAGTATGAAGGCCACATGGT
TGCTATTCAAGTGCCGTGGTCTAGCCCTTCTGGTTTATCTGTAATTGAGT
ACTTATTTTAGAGCTAGATCAGGCTATATCAATGAGAGTCCGTTATCTAT
ATATTGCGCATTTTGATGCCAAATTATGAGCAAGTTTAACTAAGTGTATT
CAAGTACAATAAAAGTACAGTAAGATTTATTAGAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAA
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