DR403265

Overview
NameDR403265
Unique NameDR403265
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403265 vs. ExPASy Swiss-Prot
Match: ERD22_CAEEL (Putative ER lumen protein retaining receptor C28H8.4 OS=Caenorhabditis elegans GN=C28H8.4 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.282e-13
Identity = 42/137 (30.66%), Postives = 75/137 (54.74%), Query Frame = 1
Query:  325 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHIILNRIFWAFCXXLEAVSVLP 723
            N+F ++A+  H + I +L+ K+ K ++C+G+S +SQ L A+    R   L+ +++  Y+                +Y++ F  RS+YM + D F +  ++VP A+LALLI+   +      + W F   LEAV++LP
Sbjct:    2 NIFRISADMSHLLAIIILLLKIWKSRSCSGISARSQILFALVFTARYLDLFSTYISLYNTTMKITFLAATYA--TVYLMFFKFRSTYMRESDTFRVELLIVPAAILALLINHDFAPF---ELLWTFSIYLEAVAILP 133          
BLAST of DR403265 vs. ExPASy Swiss-Prot
Match: ERD2_ENTHI (ER lumen protein retaining receptor OS=Entamoeba histolytica GN=ERD2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.720e-12
Identity = 44/135 (32.59%), Postives = 68/135 (50.37%), Query Frame = 1
Query:  325 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIH-XXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHIILNRIFWAFCXXLEAVSVLP 723
            NLF ++A+ VH + I  L+ K++  K C G+SL+SQ L  I    R    F   Y ++             + IY+I    R++Y +  D   ++Y++VPC VLA +    T    +  I W F   LEAV++LP
Sbjct:    4 NLFRISADLVHLLSIYFLLTKIISHKNCIGISLRSQILFFIVWVTRYLDIFYNFYSLYNTILKIVYLTTSAYTIYLISKRFRATYDKIHDTLNVWYLIVPCIVLAFIF---TEDYSITEICWTFSIFLEAVAILP 135          
BLAST of DR403265 vs. ExPASy Swiss-Prot
Match: ERD2_ARATH (ER lumen protein retaining receptor OS=Arabidopsis thaliana GN=ERD2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11
Identity = 46/139 (33.09%), Postives = 74/139 (53.24%), Query Frame = 1
Query:  325 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFN--LRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHIILNRIFWAFCXXLEAVSVLP 723
            N+F  A +  H I + +L+ K+   K+CAG+SLK+QEL A+    R   L+  +V  Y  +             +++ +R +  +R SY +D D F   YVV+ C VL L+++       +  +FWAF   LEAV++LP
Sbjct:    2 NIFRFAGDMSHLISVLILLLKIYATKSCAGISLKTQELYALVFLTRYLDLFTDYVSLY--NSIMKIVFIASSLAIVWCMRRHPLVRRSYDKDLDTFRHQYVVLACFVLGLILN---EKFTVQEVFWAFSIYLEAVAILP 135          
BLAST of DR403265 vs. ExPASy Swiss-Prot
Match: ERD2_PETHY (ER lumen protein retaining receptor OS=Petunia hybrida GN=ERD2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.996e-11
Identity = 43/139 (30.94%), Postives = 74/139 (53.24%), Query Frame = 1
Query:  325 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFN--LRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHIILNRIFWAFCXXLEAVSVLP 723
            N+F +A +  H   + VL+ K+   K+CAG+SLK+QEL A+    R   ++  F+  Y+               +++ +R +  +R SY +D+D F   ++V+PC +LAL+I+          + W F   LEAV++LP
Sbjct:    2 NIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYALVFVTRYLDIFTDFISLYNTTMKLVFLGSSLS--IVWYMRHHKIVRRSYDKDQDTFRHLFLVLPCLLLALVIN---EKFTFKEVMWTFSIYLEAVAILP 135          
BLAST of DR403265 vs. ExPASy Swiss-Prot
Match: ERD2_CAEEL (ER lumen protein retaining receptor OS=Caenorhabditis elegans GN=erd-2 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11
Identity = 40/135 (29.63%), Postives = 69/135 (51.11%), Query Frame = 1
Query:  325 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXXW-VIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHIILNRIFWAFCXXLEAVSVLP 723
            NLF   A+  H+I I VL+ K+ K ++C G+S +SQ L A+    R    F   +  +            +  +Y++    +++Y  + D+F I ++V+P  +LALLI+      I   + W F   LEAV+++P
Sbjct:    2 NLFRFTADVAHAIAIVVLLLKIWKSRSCEGISGRSQLLFALVFVTRYLDLFTNFFSFYNTAMKIFYLVASFGTVYLMWAKFKATYDRNNDSFRIEFLVIPSMILALLIN---HEFIFMEVMWTFSIYLEAVAIMP 133          
The following BLAST results are available for this feature:
BLAST of DR403265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ERD22_CAEEL7.282e-1330.66Putative ER lumen protein retaining receptor C28H8... [more]
ERD2_ENTHI4.720e-1232.59ER lumen protein retaining receptor OS=Entamoeba h... [more]
ERD2_ARATH1.373e-1133.09ER lumen protein retaining receptor OS=Arabidopsis... [more]
ERD2_PETHY3.996e-1130.94ER lumen protein retaining receptor OS=Petunia hyb... [more]
ERD2_CAEEL6.816e-1129.63ER lumen protein retaining receptor OS=Caenorhabdi... [more]
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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244G05 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244G05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403265 ID=DR403265; Name=DR403265; organism=Citrus sinensis; type=EST; length=725bp
GGGGCCGGACCCGATAATCCATACCCGACTGGGAGCGCAAATTATATTCA
GAGCAGAGCTAAAACCGATGTATCATCACTAGAGAGCAAGCCCCAATCGG
AAACTCAATTGTCTCGCTCTCTCTAAATTACATCTCACTTTCTCGCACTT
TCTCGCACTTTCCGGGAAAATATTTTTAGACCGCTCATGAGGGCGCCGAA
GAGGCCGATCCACGCGGTTTCGACATGGGTCCGGCGACAGCCGCCGAAAG
TGAAGGCATTTTTGGCGGTGGTCTCCGGCATGGCAGCGCTGGTTTTGCTC
CGATTCATTGTACACGACCACGATAACCTCTTCGTTGCTGCCGAGGCCGT
GCACTCCATTGGAATCTCCGTGTTAATATACAAGCTCATGAAAGAGAAAA
CTTGTGCTGGACTGTCACTCAAATCCCAGGAACTAACAGCTATTTTCTTA
GCTGTGAGGCTATACTGTAGTTTTGTGATGGAATACGATATACACACCCT
ACTGGATTTAGCTACTTTGGCTACGACCCTTTGGGTTATTTATATGATCC
GTTTCAATCTAAGGTCTAGTTACATGGAGGACAAGGACAACTTTGCAATA
TATTATGTGGTGGTACCCTGTGCAGTATTGGCTCTGTTAATTCATCCATC
GACTTCGCATATTATATTGAATAGAATTTTCTGGGCATTCTGTGNNNATC
TGGAAGCTGTTTCAGTACTGCCCCA
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