DR403234

Overview
NameDR403234
Unique NameDR403234
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length745
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6077 contig Csv1_Contig6077:1..745. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403234 vs. ExPASy Swiss-Prot
Match: DCNL2_MOUSE (DCN1-like protein 2 OS=Mus musculus GN=Dcun1d2 PE=2 SV=3)

HSP 1 Score: 170.244 bits (430), Expect = 1.029e-41
Identity = 84/209 (40.19%), Postives = 131/209 (62.68%), Query Frame = 1
Query:  139 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTDTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNSAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAI 744
            MHKL  + +DK++QF++ T ASE+ A+  L  ++W L+ A D F+  P++      KS  D + LE+LY+RYKDP  +  I +DGI   C+DL +DP  I +LV++W  +AAT CEFSK+EF+ G+  LG DS ++ +  +  +  ELKD  KF+++Y   F +AK  GQK L L+ A+  W+L+ + + +  +D W  FL   H ++I
Sbjct:    1 MHKLKSAQKDKVRQFMACTQASERTAIYCLTQNEWKLDEATDSFFQNPEAFHRESMKSSVDQKKLEQLYSRYKDPQDENKIGIDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSKKEFVDGMTELGCDSTERLKALLPRLEQELKDPAKFKDLYQFTFTFAKNPGQKGLDLEMAVAYWKLVLSGR-FKFLDLWNTFLLEHHKRSI 208          
BLAST of DR403234 vs. ExPASy Swiss-Prot
Match: DCNL2_HUMAN (DCN1-like protein 2 OS=Homo sapiens GN=DCUN1D2 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.994e-41
Identity = 84/209 (40.19%), Postives = 127/209 (60.77%), Query Frame = 1
Query:  139 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTDTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNSAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAI 744
            MHKL  S +DK++QF++ T A E+ A+  L  ++W L+ A D F+  P S      ++  D + LE LY RYKDP  +  I VDGI   C+DL +DP  I +LV++W  +AAT CEFS++EF+ G+  LG DS++K +  +  +  ELKD  KF++ Y   F +AK  GQK L L+ A+  W+L+ + + +  +D W  FL   H ++I
Sbjct:    1 MHKLKSSQKDKVRQFMACTQAGERTAIYCLTQNEWRLDEATDSFFQNPDSLHRESMRNAVDKKKLERLYGRYKDPQDENKIGVDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRKEFLDGMTELGCDSMEKLKALLPRLEQELKDTAKFKDFYQFTFTFAKNPGQKGLDLEMAVAYWKLVLSGR-FKFLDLWNTFLMEHHKRSI 208          
BLAST of DR403234 vs. ExPASy Swiss-Prot
Match: DCNL1_HUMAN (DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.994e-41
Identity = 87/209 (41.63%), Postives = 128/209 (61.24%), Query Frame = 1
Query:  139 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTDTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNSAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAI 744
            M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   D + LE+LYNRYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQEF+ G+  LG DS++K + +I  M  ELK+  +F++ Y   F +AK  GQK L L+ AI  W L+    ++  +D W +FL   H ++I
Sbjct:    1 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLDRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVL-NGRFKFLDLWNKFLLEHHKRSI 208          
BLAST of DR403234 vs. ExPASy Swiss-Prot
Match: DCNL1_CHICK (DCN1-like protein 1 OS=Gallus gallus GN=DCUN1D1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.138e-40
Identity = 86/209 (41.15%), Postives = 127/209 (60.77%), Query Frame = 1
Query:  139 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTDTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNSAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAI 744
            M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   D + LE+LYNRYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSK EF+ G+  LG DS++K + +I  M  ELK+  +F++ Y   F +AK  GQK L L+ AI  W L+    ++  +D W +FL   H ++I
Sbjct:    1 MNKLKSSQKDKVRQFMVFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLDRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASITVLIIAWKFRAATQCEFSKLEFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVL-NGRFKFLDLWNKFLLEHHKRSI 208          
BLAST of DR403234 vs. ExPASy Swiss-Prot
Match: DCNL1_MOUSE (DCN1-like protein 1 OS=Mus musculus GN=Dcun1d1 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.486e-40
Identity = 86/209 (41.15%), Postives = 127/209 (60.77%), Query Frame = 1
Query:  139 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTDTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNSAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAI 744
            M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   D + LE+LY RYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQEF+ G+  LG DS++K + +I  M  ELK+  +F++ Y   F +AK  GQK L L+ AI  W L+    ++  +D W +FL   H ++I
Sbjct:    1 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLDRKKLEQLYTRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVL-NGRFKFLDLWNKFLLEHHKRSI 208          
BLAST of DR403234 vs. ExPASy Swiss-Prot
Match: DCN1L_DROME (DCN1-like protein OS=Drosophila melanogaster GN=CG7427 PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.455e-35
Identity = 75/205 (36.59%), Postives = 125/205 (60.98%), Query Frame = 1
Query:  139 MHKL-SRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLT-DTRHLEELYNRYKDPYLDM-ILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNSAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAI 744
            M+KL S ++RDK+++F+S+T   E+ A+  L+ +DW  E A D ++  P+      D + +E+L+ RY+DP   + I   G+     DL + P   ++L+++W   A   CEFS+ EFI G+  LGIDS+DK + ++  +  EL D  KF++ Y+  F +AK+ GQK + L+ AI  W ++ + + +  +D WCQFL+ KH +AI
Sbjct:    1 MNKLKSSTHRDKVKKFISLTHTGEQTAIFCLQQNDWKFELASDNYFQNPEYYYRELDRKRIEQLFMRYRDPSDPLKIGSQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFSRDEFINGMCDLGIDSIDKLKTKLPILEQELNDAGKFKDFYHFTFNYAKDPGQKGIDLEMAIAYWCIVLSGR-FKFLDIWCQFLEEKHKRAI 204          
BLAST of DR403234 vs. ExPASy Swiss-Prot
Match: DCNL3_XENTR (DCN1-like protein 3 OS=Xenopus tropicalis GN=dcun1d3 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.158e-27
Identity = 70/203 (34.48%), Postives = 111/203 (54.68%), Query Frame = 1
Query:  142 HKLSRSNRDKLQQFVSITG-ASEKAALQALKASDWHLE-------GAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNSAFAWA--KEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFL 720
            HK S S++D   + +SI G AS +  +   K  D  LE       G       Q     L+  + +EEL+ RYKD   D IL +G+   CNDL VDP +  +LV++W  +AATMC+F+++EF  G +++  D ++    R   +  E K E KF+++Y   F +    E+GQ+SL  + AI +W+L+F + +  ++D W  FL
Sbjct:   28 HKRSSSHKD---EHLSICGKASREILVNGTKKGDVSLEASQPLAAGGDTKKKEQGTGAELSSVQRIEELFWRYKDEREDAILEEGMERFCNDLYVDPTEFRVLVLAWKFQAATMCKFTRREFFEGCKAINADGIEGICARFPSLLNEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIALWKLVFTQNKPLILDQWLDFL 227          
BLAST of DR403234 vs. ExPASy Swiss-Prot
Match: DCNL3_RAT (DCN1-like protein 3 OS=Rattus norvegicus GN=Dcun1d3 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.349e-27
Identity = 56/140 (40.00%), Postives = 88/140 (62.86%), Query Frame = 1
Query:  307 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNSAFAWA--KEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFL 720
            + LEEL+ RYKD   D IL +G+   CNDL VDP +  +L+++W  +AATMC+F+++EF  G +++  DS+D    R   +  E K E KF+++Y   F +    E+GQ+SL  + AI +W+L+F +   P++D W  FL
Sbjct:   89 QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIALWKLVFTQNNPPVLDQWLNFL 228          
BLAST of DR403234 vs. ExPASy Swiss-Prot
Match: DCNL3_PONAB (DCN1-like protein 3 OS=Pongo abelii GN=DCUN1D3 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.349e-27
Identity = 56/140 (40.00%), Postives = 88/140 (62.86%), Query Frame = 1
Query:  307 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNSAFAWA--KEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFL 720
            + LEEL+ RYKD   D IL +G+   CNDL VDP +  +L+++W  +AATMC+F+++EF  G +++  DS+D    R   +  E K E KF+++Y   F +    E+GQ+SL  + AI +W+L+F +   P++D W  FL
Sbjct:   89 QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIALWKLVFTQNNPPVLDQWLNFL 228          
BLAST of DR403234 vs. ExPASy Swiss-Prot
Match: DCNL3_MOUSE (DCN1-like protein 3 OS=Mus musculus GN=Dcun1d3 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.349e-27
Identity = 56/140 (40.00%), Postives = 88/140 (62.86%), Query Frame = 1
Query:  307 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNSAFAWA--KEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFL 720
            + LEEL+ RYKD   D IL +G+   CNDL VDP +  +L+++W  +AATMC+F+++EF  G +++  DS+D    R   +  E K E KF+++Y   F +    E+GQ+SL  + AI +W+L+F +   P++D W  FL
Sbjct:   89 QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIALWKLVFTQNNPPVLDQWLNFL 228          
The following BLAST results are available for this feature:
BLAST of DR403234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
DCNL2_MOUSE1.029e-4140.19DCN1-like protein 2 OS=Mus musculus GN=Dcun1d2 PE=... [more]
DCNL2_HUMAN2.994e-4140.19DCN1-like protein 2 OS=Homo sapiens GN=DCUN1D2 PE=... [more]
DCNL1_HUMAN2.994e-4141.63DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=... [more]
DCNL1_CHICK1.138e-4041.15DCN1-like protein 1 OS=Gallus gallus GN=DCUN1D1 PE... [more]
DCNL1_MOUSE1.486e-4041.15DCN1-like protein 1 OS=Mus musculus GN=Dcun1d1 PE=... [more]
DCN1L_DROME2.455e-3536.59DCN1-like protein OS=Drosophila melanogaster GN=CG... [more]
DCNL3_XENTR7.158e-2734.48DCN1-like protein 3 OS=Xenopus tropicalis GN=dcun1... [more]
DCNL3_RAT9.349e-2740.00DCN1-like protein 3 OS=Rattus norvegicus GN=Dcun1d... [more]
DCNL3_PONAB9.349e-2740.00DCN1-like protein 3 OS=Pongo abelii GN=DCUN1D3 PE=... [more]
DCNL3_MOUSE9.349e-2740.00DCN1-like protein 3 OS=Mus musculus GN=Dcun1d3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244E10 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403234 ID=DR403234; Name=DR403234; organism=Citrus sinensis; type=EST; length=745bp
GGGGAGAGTGAAAATATAAAAATAAAAAATAAAAAAAGAAGGAGAGCCAA
AAGCCGAAGAAGCCCTAGAGTTCGTCTCGAGAGAGAGCTTTCTCATTCAT
CAGCATAAAACCAAATATCAAATTCACAAGCTCCCGAGATGCATAAGCTG
AGTAGAAGTAACCGGGACAAACTCCAACAATTTGTCTCGATAACTGGGGC
AAGCGAAAAAGCTGCTCTTCAGGCTTTGAAGGCTAGTGACTGGCATCTTG
AAGGAGCATTTGATGTATTCTATAGCCAACCTCAATCAAAATCACTAACT
GATACCAGACATTTGGAGGAGCTTTATAACAGATATAAAGATCCATATCT
TGATATGATTCTGGTTGACGGTATCACTCTCCTGTGCAATGACCTTCAGG
TGGATCCTCAAGATATAGTTATGTTAGTTGTTTCATGGCACATGAAAGCT
GCTACAATGTGTGAATTCTCAAAGCAGGAGTTCATAGGTGGGTTGCAATC
ACTAGGGATAGATTCTCTGGATAAGTTCCGTGAAAGGATATCATTCATGC
GGGCTGAGCTGAAAGATGAACAAAAATTCCGTGAGATATACAACTCTGCA
TTTGCCTGGGCAAAAGAAAAGGGTCAGAAATCTCTGGCATTGGACACTGC
AATCGGAATGTGGCAATTATTATTTGCTGAGAAGCAGTGGCCACTAGTTG
ATCATTGGTGCCAGTTCTTGCAGGCTAAGCATAATAAAGCAATCT
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