DR403226

Overview
NameDR403226
Unique NameDR403226
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13665 contig Csv1_Contig13665:1..669. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2)

HSP 1 Score: 338.961 bits (868), Expect = 3.183e-94
Identity = 165/169 (97.63%), Postives = 168/169 (99.41%), Query Frame = 3
Query:  147 FAKKEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNVANKA 653
            FAKKEMRILMV LDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+VEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN+ANKA
Sbjct:   13 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181          

HSP 2 Score: 27.7202 bits (60), Expect = 3.183e-94
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 2
Query:  110 MGLTFTKLFSRLVCQE 157
            MGLTFTKLFSRL  ++
Sbjct:    1 MGLTFTKLFSRLFAKK 16          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 337.035 bits (863), Expect = 1.203e-93
Identity = 164/169 (97.04%), Postives = 168/169 (99.41%), Query Frame = 3
Query:  147 FAKKEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNVANKA 653
            FAKKEMRILMV LDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+VEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN+A+KA
Sbjct:   13 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181          

HSP 2 Score: 27.7202 bits (60), Expect = 1.203e-93
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 2
Query:  110 MGLTFTKLFSRLVCQE 157
            MGLTFTKLFSRL  ++
Sbjct:    1 MGLTFTKLFSRLFAKK 16          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3)

HSP 1 Score: 337.035 bits (863), Expect = 3.484e-93
Identity = 164/169 (97.04%), Postives = 168/169 (99.41%), Query Frame = 3
Query:  147 FAKKEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNVANKA 653
            FAKKEMRILMV LDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDR+VEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGL+WLSNN+A+KA
Sbjct:   13 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLEWLSNNIASKA 181          

HSP 2 Score: 26.1794 bits (56), Expect = 3.484e-93
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 2
Query:  110 MGLTFTKLFSRLVCQE 157
            MGL+FTKLFSRL  ++
Sbjct:    1 MGLSFTKLFSRLFAKK 16          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARF2_ARATH (ADP-ribosylation factor 2 OS=Arabidopsis thaliana GN=ARF2-A PE=2 SV=3)

HSP 1 Score: 338.191 bits (866), Expect = 5.929e-93
Identity = 165/169 (97.63%), Postives = 167/169 (98.82%), Query Frame = 3
Query:  147 FAKKEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNVANKA 653
            FAKKEMRILMV LDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDR+VEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN+A KA
Sbjct:   13 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGKA 181          

HSP 2 Score: 24.2534 bits (51), Expect = 5.929e-93
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 2
Query:  110 MGLTFTKLFSRLVCQE 157
            MGL+F KLFSRL  ++
Sbjct:    1 MGLSFAKLFSRLFAKK 16          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2)

HSP 1 Score: 338.576 bits (867), Expect = 7.735e-93
Identity = 165/169 (97.63%), Postives = 168/169 (99.41%), Query Frame = 3
Query:  147 FAKKEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNVANKA 653
            FAKKEMRILMV LDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDR+VEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN+A+KA
Sbjct:   13 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181          

HSP 2 Score: 23.483 bits (49), Expect = 7.735e-93
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 2
Query:  110 MGLTFTKLFSRLVCQE 157
            MGL+F KLFSRL  ++
Sbjct:    1 MGLSFGKLFSRLFAKK 16          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARF1_DAUCA (ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1 PE=2 SV=2)

HSP 1 Score: 335.109 bits (858), Expect = 1.316e-92
Identity = 163/169 (96.45%), Postives = 167/169 (98.82%), Query Frame = 3
Query:  147 FAKKEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNVANKA 653
            FAKKEMRILMV LDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDR+VEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEI DKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN+A+K+
Sbjct:   13 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEIIDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKS 181          

HSP 2 Score: 26.1794 bits (56), Expect = 1.316e-92
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 2
Query:  110 MGLTFTKLFSRLVCQE 157
            MGL+FTKLFSRL  ++
Sbjct:    1 MGLSFTKLFSRLFAKK 16          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARF_MAIZE (ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 SV=2)

HSP 1 Score: 331.257 bits (848), Expect = 6.488e-92
Identity = 161/169 (95.27%), Postives = 167/169 (98.82%), Query Frame = 3
Query:  147 FAKKEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNVANKA 653
            FAKKEMRILMV LDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDR+VEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL+SLRQRHWYIQSTCAT+GEGLYEGLDWLS+N+A K+
Sbjct:   13 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLNSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIATKS 181          

HSP 2 Score: 27.7202 bits (60), Expect = 6.488e-92
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 2
Query:  110 MGLTFTKLFSRLVCQE 157
            MGLTFTKLFSRL  ++
Sbjct:    1 MGLTFTKLFSRLFAKK 16          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARF1_CATRO (ADP-ribosylation factor 1 OS=Catharanthus roseus GN=ARF1 PE=2 SV=3)

HSP 1 Score: 331.643 bits (849), Expect = 1.440e-91
Identity = 162/169 (95.86%), Postives = 166/169 (98.22%), Query Frame = 3
Query:  147 FAKKEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNVANKA 653
            FAKKEMRILMV LDAAGKTTILY+LKLGEIVTTIPTIGFNVETVEY+ ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDR+VEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDK GLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN+ANKA
Sbjct:   13 FAKKEMRILMVGLDAAGKTTILYQLKLGEIVTTIPTIGFNVETVEYQYISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKHGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181          

HSP 2 Score: 26.1794 bits (56), Expect = 1.440e-91
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 2
Query:  110 MGLTFTKLFSRLVCQE 157
            MGL+FTKLFSRL  ++
Sbjct:    1 MGLSFTKLFSRLFAKK 16          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARF1_CHLRE (ADP-ribosylation factor 1 OS=Chlamydomonas reinhardtii GN=ARF1 PE=2 SV=2)

HSP 1 Score: 335.109 bits (858), Expect = 2.117e-91
Identity = 163/168 (97.02%), Postives = 166/168 (98.81%), Query Frame = 3
Query:  147 FAKKEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNVANK 650
            F KKEMRILMV LDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+VEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN+ANK
Sbjct:   13 FGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNLANK 180          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARF1_SALBA (ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 PE=2 SV=3)

HSP 1 Score: 333.569 bits (854), Expect = 6.161e-91
Identity = 162/169 (95.86%), Postives = 167/169 (98.82%), Query Frame = 3
Query:  147 FAKKEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNVANKA 653
            F+KKEMRILMV LDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDR+ EARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN+++KA
Sbjct:   13 FSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVGEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNISSKA 181          
The following BLAST results are available for this feature:
BLAST of DR403226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARF2_ORYSJ3.183e-9497.63ADP-ribosylation factor 2 OS=Oryza sativa subsp. j... [more]
ARF1_ORYSJ1.203e-9397.04ADP-ribosylation factor 1 OS=Oryza sativa subsp. j... [more]
ARF_VIGUN3.484e-9397.04ADP-ribosylation factor OS=Vigna unguiculata GN=AR... [more]
ARF2_ARATH5.929e-9397.63ADP-ribosylation factor 2 OS=Arabidopsis thaliana ... [more]
ARF1_ARATH7.735e-9397.63ADP-ribosylation factor 1 OS=Arabidopsis thaliana ... [more]
ARF1_DAUCA1.316e-9296.45ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1... [more]
ARF_MAIZE6.488e-9295.27ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 S... [more]
ARF1_CATRO1.440e-9195.86ADP-ribosylation factor 1 OS=Catharanthus roseus G... [more]
ARF1_CHLRE2.117e-9197.02ADP-ribosylation factor 1 OS=Chlamydomonas reinhar... [more]
ARF1_SALBA6.161e-9195.86ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 P... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244E02 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403226 ID=DR403226; Name=DR403226; organism=Citrus sinensis; type=EST; length=694bp
GGGGATATACATATTTCTGCGTTGTTGTTAAGCTAATAAGCTTCGTCCTC
CACACCCCCCCCCCCTCCCCTCTCTCTCGCGTTCTCTGAAGTGATCCCCA
GCTGGAAGAATGGGGCTGACTTTCACAAAGCTGTTCAGCCGGCTCGTTTG
CCAAGAAAGAGATGCGAATTCTAATGGTTNNTCTTGATGCTGCTGGTAAG
ACCACTATCTTGTACAAGCTCAAGCTTGGAGAGATTGTCACCACAATTCC
TACCATTGGGTTTAATGTGGAGACCGTTGAATATAAAAACATCAGTTTCA
CTGTGTGGGATGTTGGTGGCCAGGACAAGATTCGTCCCTTGTGGAGGCAT
TATTTCCAGAACACTCAAGGTCTCATTTTTGTTGTGGACAGCAATGACAG
AGACCGTATTGTAGAAGCAAGGGATGAATTGCATAGGATGTTGAATGAGG
ATGAGCTGCGAGATGCAGTGTTGCTTGTATTTGCTAACAAACAGGATCTT
CCAAATGCAATGAATGCTGCTGAGATTACTGATAAGCTTGGCCTCCACTC
CCTCAGGCAGCGCCACTGGTACATCCAGAGCACCTGTGCAACCTCTGGTG
AGGGTCTTTATGAAGGTCTGGATTGGCTCTCCAACAACGTCGCTAACAAG
GCCTGAAGCTGTTAAGATCTTTTTGCGGACTGGCAATTCTGGAT
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