DR403212

Overview
NameDR403212
Unique NameDR403212
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length435
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR403212 vs. ExPASy Swiss-Prot
Match: PGAP3_DROME (Post-GPI attachment to proteins factor 3 OS=Drosophila melanogaster GN=CG3271 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.943e-13
Identity = 34/86 (39.53%), Postives = 50/86 (58.14%), Query Frame = 1 
Query:  178 KYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIYGILSMNSWFWSAVFHSRDVELT 435
            +++GKWPF R+ G+QEP +V  S LN  +         +L  ++  +RPD   Y     L HI+ + S+N W WSA+FH+RD  LT
Sbjct:   96 QFYGKWPFLRLLGMQEPASVIFSCLNFVVHLR------LLRKFRREVRPDSPCYM----LTHIFAVTSLNGWIWSAIFHTRDFPLT 171
The following BLAST results are available for this feature:
BLAST of DR403212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PGAP3_DROME3.943e-1339.53Post-GPI attachment to proteins factor 3 OS=Drosop... [more]
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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244D07 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244D07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403212 ID=DR403212; Name=DR403212; organism=Citrus sinensis; type=EST; length=435bp
GGGCTTCCAACACTGTAACTTTTCATCTGATGGAAAACCTATTGATGGGC
CATGGTATCTGACAAGAACCACTCTATCTCCGTGTGGAAACAATTGGGAN
NGCAGCTAGTGAGCTTTNGATATCACTGTNNNCTTGCTAGNNNNNGGGAN
NNAGAAAAAGTTGGTGACAAGCCTGTCAAGTATCATGGGAAATGGCCATT
CCGCCGTGTTTACGGAATTCAGGAACCCGTTGCTGTTGCTCTCTCTGCAC
TCAATCTTTCCATACAATTTCATGGGTGGATGTCCTTCTTCATCCTTCTG
TACTATAAGTTGCCTTTGAGACCAGATAAGAAAACTTATTACGAATATAC
TGGTTTATGGCACATCTATGGCATCCTATCAATGAACTCCTGGTTCTGGA
GTGCTGTTTTCCACAGTCGAGATGTTGAATTGACA
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