CX046758
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX046758 vs. ExPASy Swiss-Prot
Match: SAR1A_ARATH (GTP-binding protein SAR1A OS=Arabidopsis thaliana GN=SAR1A PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 7.142e-46 Identity = 95/132 (71.97%), Postives = 100/132 (75.76%), Query Frame = -1 Query: 365 GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXANVPFLVLGNKIDIPYAAFEEELRYPLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 760 GKIKFKAFDLGGHQIARRVW KERFAESKK A+VPFL+LGNKIDIPYAA E+ELRY LGLSNFTTGKGKVNL DSNVRPLEVFMCSIVRKMGYG+GFKW+SQYIK Sbjct: 62 GKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLASVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMGYGEGFKWVSQYIK 193
BLAST of CX046758 vs. ExPASy Swiss-Prot
Match: SAR1A_BRACM (GTP-binding protein SAR1A OS=Brassica campestris GN=SAR1A PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.031e-44 Identity = 94/132 (71.21%), Postives = 98/132 (74.24%), Query Frame = -1 Query: 365 GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXANVPFLVLGNKIDIPYAAFEEELRYPLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 760 GKIKFKAFDLGGHQIARRVW KERFAESKK A VPFL+LGNKIDIPYAA E+ELRY LGLSNFTTGKGKV+L SNVRPLEVFMCSIVRKMGYG+GFKWLSQYIK Sbjct: 62 GKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLATVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVDLVGSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 193
BLAST of CX046758 vs. ExPASy Swiss-Prot
Match: SAR1B_ARATH (GTP-binding protein SAR1B OS=Arabidopsis thaliana GN=SAR1B PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.945e-43 Identity = 91/131 (69.47%), Postives = 96/131 (73.28%), Query Frame = -1 Query: 368 GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXANVPFLVLGNKIDIPYAAFEEELRYPLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 760 GKIKFKAFDLGGHQIARRVW KERFAESK+ A VPFL+LGNKIDIPYAA E+ELRY LGL+NFTTGKGKV L DS VRPLEVFMCSIVRKMGYG+GFKWLSQYI Sbjct: 62 GKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALATVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVTLGDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYI 192
BLAST of CX046758 vs. ExPASy Swiss-Prot
Match: SAR2_SOLLC (GTP-binding protein SAR2 OS=Solanum lycopersicum GN=SAR2 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.394e-41 Identity = 84/132 (63.64%), Postives = 94/132 (71.21%), Query Frame = -1 Query: 365 GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXANVPFLVLGNKIDIPYAAFEEELRYPLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 760 G IKFKAFDLGGHQIARRVW +ERF E+KK NVPFL+LGNKIDIPYAA E+ELRY LGL+ TTGKG +NLA +NVRP+EVFMCSIVRKMGYG+GFKW+SQYIK Sbjct: 62 GNIKFKAFDLGGHQIARRVWRDYYAKVDAVVYLVDANDRERFPEAKKELDGLLSDESLTNVPFLILGNKIDIPYAASEDELRYHLGLTGVTTGKGNINLAGTNVRPIEVFMCSIVRKMGYGEGFKWMSQYIK 193
BLAST of CX046758 vs. ExPASy Swiss-Prot
Match: SAR1B_BRACM (GTP-binding protein SAR1B OS=Brassica campestris GN=SAR1B PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.297e-41 Identity = 90/133 (67.67%), Postives = 95/133 (71.43%), Query Frame = -1 Query: 368 GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXANVPFLVLGNKIDIPYAAFEEELRYPLGLSNFTTGKGKVNLA--DSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 760 GKIKFKAFDLGGHQIARRVW KERF+ESKK A VPFL+LGNKID PYAA E+ELRY LGL+NFTTGKGKV A DS VRPLEVFMCSIVRKMGYG+GFKWLSQYI Sbjct: 62 GKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDALATVPFLILGNKIDNPYAASEDELRYHLGLTNFTTGKGKVTTAGGDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYI 194
BLAST of CX046758 vs. ExPASy Swiss-Prot
Match: SAR1_USTMA (Small COPII coat GTPase SAR1 OS=Ustilago maydis GN=SAR1 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.937e-28 Identity = 64/131 (48.85%), Postives = 82/131 (62.60%), Query Frame = -1 Query: 368 GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXANVPFLVLGNKIDIPYAAFEEELRYPLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 760 G++KF +DLGGHQ ARR+W ERFAE++ ++VPFL+LGNKID P A EEELR +GL TTGKGKV L D +RP+E+FMCS+V + GYG+GF+W+SQYI Sbjct: 62 GQVKFTTYDLGGHQQARRLWKDYFPEVDGIVFLVDTQDHERFAEARAELDALLSIEELSSVPFLILGNKIDAPGAVSEEELRQAIGLYQ-TTGKGKVPLKD--IRPIEIFMCSVVMRQGYGEGFRWISQYI 189
BLAST of CX046758 vs. ExPASy Swiss-Prot
Match: SAR1_TOBAC (GTP-binding protein SAR1 OS=Nicotiana tabacum GN=SAR1 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.353e-27 Identity = 71/137 (51.82%), Postives = 83/137 (60.58%), Query Frame = -1 Query: 365 GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXANVPFLVLGN---KIDIPYAAFEE-ELRYPLGLSNFTT-GKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 760 GKIKFKAFDLGGHQIARRVW KERFAESKK FL L N +I+ P + RY +G + + +GKVNLADSNVRP+EVFMCSIVR+MGYG+GF+W+SQYIK Sbjct: 62 GKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDSFDKERFAESKKELDALLSGWSSLAHCFLFLDNWVTRIEHPICCLRKMNWRYHMGANGASPLARGKVNLADSNVRPVEVFMCSIVRQMGYGEGFRWMSQYIK 198
BLAST of CX046758 vs. ExPASy Swiss-Prot
Match: SAR1_CRYNE (Small COPII coat GTPase SAR1 OS=Cryptococcus neoformans GN=SAR1 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.685e-27 Identity = 66/131 (50.38%), Postives = 79/131 (60.31%), Query Frame = -1 Query: 368 GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXANVPFLVLGNKIDIPYAAFEEELRYPLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 760 G +KF +DLGGH ARR+W ERFAESK A VPFL+LGNKID A EE+LR+ LGL TTGKGK+ L D +RP+EVFMCS+V + GYG+GF+WLSQYI Sbjct: 62 GNVKFTTYDLGGHIQARRLWRDYFPEVDGIVFLVDSADAERFAESKAELDSLLSIESLAQVPFLILGNKIDAYGAVSEEQLRHELGLYQ-TTGKGKIPLRD--IRPIEVFMCSVVMRQGYGEGFRWLSQYI 189
BLAST of CX046758 vs. ExPASy Swiss-Prot
Match: SAR1_YARLI (Small COPII coat GTPase SAR1 OS=Yarrowia lipolytica GN=SAR1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.425e-27 Identity = 66/131 (50.38%), Postives = 76/131 (58.02%), Query Frame = -1 Query: 368 GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXANVPFLVLGNKIDIPYAAFEEELRYPLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 760 G KF FDLGGH ARRVW RFAESK VPFL+LGNKID+P A E EL+ LGL TTGKGKV L + N+RP+E+FMCSIV + GYGDG +WLSQY+ Sbjct: 62 GNCKFTTFDLGGHIQARRVWKDYFPEVNGIVFLVDAADPTRFAESKAELDSLLAIEQLKTVPFLILGNKIDMPQAVSELELKDALGLYQ-TTGKGKVPL-EGNIRPIEIFMCSIVMRQGYGDGIRWLSQYV 190
BLAST of CX046758 vs. ExPASy Swiss-Prot
Match: SAR1B_RAT (GTP-binding protein SAR1b OS=Rattus norvegicus GN=Sar1b PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.654e-26 Identity = 62/127 (48.82%), Postives = 74/127 (58.27%), Query Frame = -1 Query: 368 FKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXANVPFLVLGNKIDIPYAAFEEELRYPLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 748 F FDLGGH ARRVW ER ESK+ ANVP L+LGNKID P A EE LR GL TTGKG V+L + N RPLEVFMCS++++ GYG+GF+W++QYI Sbjct: 71 FTTFDLGGHLQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197 The following BLAST results are available for this feature:
BLAST of CX046758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046758 ID=CX046758; Name=CX046758; organism=Citrus sinensis; type=EST; length=760bpback to top |