CX046754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX046754 vs. ExPASy Swiss-Prot
Match: RL44_GOSHI (60S ribosomal protein L44 OS=Gossypium hirsutum GN=RPL44 PE=3 SV=3) HSP 1 Score: 219.55 bits (558), Expect = 8.640e-57 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = -1 Query: 209 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGT 514 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGT Sbjct: 1 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGT 102
BLAST of CX046754 vs. ExPASy Swiss-Prot
Match: RL36A_ARATH (60S ribosomal protein L36a OS=Arabidopsis thaliana GN=RPL36AA PE=2 SV=3) HSP 1 Score: 207.608 bits (527), Expect = 3.398e-53 Identity = 95/102 (93.14%), Postives = 98/102 (96.08%), Query Frame = -1 Query: 209 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGT 514 MVN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQ CKH SQ PIKRCKHFEIGGDKKGKGT Sbjct: 1 MVNIPKTKNTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEIGGDKKGKGT 102
BLAST of CX046754 vs. ExPASy Swiss-Prot
Match: RL44_PHARH (60S ribosomal protein L44 OS=Phaffia rhodozyma GN=RPL44 PE=3 SV=3) HSP 1 Score: 179.489 bits (454), Expect = 9.909e-45 Identity = 81/101 (80.20%), Postives = 90/101 (89.11%), Query Frame = -1 Query: 212 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 514 MVNVPKT++TYCK K C+KHT HKVTQYKKGKDS+ AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C CK+ Q +KRCKHFE+GGDKK KG Sbjct: 1 MVNVPKTRRTYCKGKACKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECSVCKYKMQMTLKRCKHFELGGDKKTKG 101
BLAST of CX046754 vs. ExPASy Swiss-Prot
Match: RL44_CRYNE (60S ribosomal protein L44 OS=Cryptococcus neoformans GN=RPL44 PE=3 SV=3) HSP 1 Score: 178.718 bits (452), Expect = 1.690e-44 Identity = 81/101 (80.20%), Postives = 90/101 (89.11%), Query Frame = -1 Query: 212 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 514 MVN+PKT++TYCK K CRKHT HKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C CK Q +KRCKHFE+GGDKK +G Sbjct: 1 MVNIPKTRRTYCKGKACRKHTPHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKTKHQLALKRCKHFELGGDKKQRG 101
BLAST of CX046754 vs. ExPASy Swiss-Prot
Match: RL44_PICJA (60S ribosomal protein L44 OS=Pichia jadinii GN=RPL44 PE=3 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 6.423e-44 Identity = 82/101 (81.19%), Postives = 89/101 (88.12%), Query Frame = -1 Query: 212 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 514 MVNVPKT++TYCK KECRKHT HKVTQYK GK SL AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C CK +Q +KRCKHFE+GGDKK KG Sbjct: 1 MVNVPKTRRTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECVVCKTKAQLALKRCKHFELGGDKKQKG 101
BLAST of CX046754 vs. ExPASy Swiss-Prot
Match: RL44_PICCI (60S ribosomal protein L44 OS=Pichia ciferrii GN=RPL44 PE=3 SV=3) HSP 1 Score: 176.792 bits (447), Expect = 6.423e-44 Identity = 82/101 (81.19%), Postives = 89/101 (88.12%), Query Frame = -1 Query: 212 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 514 MVNVPKT+KTYCK KECRKHT HKVTQYK GK SL AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C CK +Q +KRCKHFE+GGD+K KG Sbjct: 1 MVNVPKTRKTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECVVCKTKAQLSLKRCKHFELGGDRKQKG 101
BLAST of CX046754 vs. ExPASy Swiss-Prot
Match: RL44_COPCI (60S ribosomal protein L44 OS=Coprinopsis cinerea GN=RPL44 PE=3 SV=3) HSP 1 Score: 176.792 bits (447), Expect = 6.423e-44 Identity = 79/101 (78.22%), Postives = 90/101 (89.11%), Query Frame = -1 Query: 212 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 514 MVN+PKT++TYCK K C+KHT HKVTQYKKGKDS+ AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C CK+ Q +KRCKHFE+GG+KK KG Sbjct: 1 MVNIPKTRRTYCKGKTCKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKYKMQVSLKRCKHFELGGEKKTKG 101
BLAST of CX046754 vs. ExPASy Swiss-Prot
Match: RL44_COPC7 (60S ribosomal protein L44 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=RPL44 PE=3 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 6.423e-44 Identity = 79/101 (78.22%), Postives = 90/101 (89.11%), Query Frame = -1 Query: 212 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 514 MVN+PKT++TYCK K C+KHT HKVTQYKKGKDS+ AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C CK+ Q +KRCKHFE+GG+KK KG Sbjct: 1 MVNIPKTRRTYCKGKTCKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKYKMQVSLKRCKHFELGGEKKTKG 101
BLAST of CX046754 vs. ExPASy Swiss-Prot
Match: RL44_DEBHA (60S ribosomal protein L44 OS=Debaryomyces hansenii GN=RPL44 PE=3 SV=3) HSP 1 Score: 175.252 bits (443), Expect = 1.869e-43 Identity = 81/101 (80.20%), Postives = 88/101 (87.13%), Query Frame = -1 Query: 212 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 514 MVNVPKT++TYCK KECRKHT HKVTQYK GK SL AQGKRRYDRKQ GYGGQTKPVFHKKAKTTKK+VLRL+C CK +Q +KRCKHFE+GGDKK KG Sbjct: 1 MVNVPKTRRTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQKGYGGQTKPVFHKKAKTTKKVVLRLECVVCKTKAQLSLKRCKHFELGGDKKQKG 101
BLAST of CX046754 vs. ExPASy Swiss-Prot
Match: RL44_CANGY (60S ribosomal protein L44 OS=Candida glycerinogenes GN=RPL44 PE=3 SV=3) HSP 1 Score: 174.481 bits (441), Expect = 3.188e-43 Identity = 80/101 (79.21%), Postives = 88/101 (87.13%), Query Frame = -1 Query: 212 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 514 MVNVPKT+KTYCK K+C+KHT HKVTQYK GK SL +QGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C CK Q +KRCKHFE+GGDKK KG Sbjct: 1 MVNVPKTRKTYCKGKQCKKHTQHKVTQYKAGKASLYSQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECVACKTKLQLSLKRCKHFELGGDKKQKG 101 The following BLAST results are available for this feature:
BLAST of CX046754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046754 ID=CX046754; Name=CX046754; organism=Citrus sinensis; type=EST; length=562bpback to top |