CX046753

Overview
NameCX046753
Unique NameCX046753
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length828
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6737 contig Csv1_Contig6737:14..841. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX046753 vs. ExPASy Swiss-Prot
Match: DCN1L_DROME (DCN1-like protein OS=Drosophila melanogaster GN=CG7427 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.083e-21
Identity = 48/114 (42.11%), Postives = 69/114 (60.53%), Query Frame = 1
Query:  292 DELFKLMSQLDLM----GDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVE 621
            D + KL ++L ++     D  +F  FY F F   ++ GQK I +  A+  W +VL+GRF+ L+ WC F+E   +  IS DTW  +L F+  + + +  YD EGAWPVLIDDFVE
Sbjct:  128 DSIDKLKTKLPILEQELNDAGKFKDFYHFTFNYAKDPGQKGIDLEMAIAYWCIVLSGRFKFLDIWCQFLEEKHKRAISRDTWNLLLDFATNIDDRMSNYDSEGAWPVLIDDFVE 241          
BLAST of CX046753 vs. ExPASy Swiss-Prot
Match: DCNL2_HUMAN (DCN1-like protein 2 OS=Homo sapiens GN=DCUN1D2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.564e-20
Identity = 60/200 (30.00%), Postives = 101/200 (50.50%), Query Frame = 1
Query:   73 NPESMKSPSLSNPLD---IFEIYRRFCEIKSQNA-DVCIEDSYREDNESPKAKFSREALAELFN-----------LVESTVHIRIFVFDELFKLMSQLDL-MGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEH 624
            NP+S+   S+ N +D   +  +Y R+ + + +N   V     + +D     A  S   +A  F             ++    +     ++L  L+ +L+  + D ++F  FY F F   +  GQK + +  AV  W+LVL+GRF+ L+ W  F+  + + +I  DTW  +L F   + +++  YD EGAWPVLIDDFVE+
Sbjct:   47 NPDSLHRESMRNAVDKKKLERLYGRYKDPQDENKIGVDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRKEFLDGMTELGCDSMEKLKALLPRLEQELKDTAKFKDFYQFTFTFAKNPGQKGLDLEMAVAYWKLVLSGRFKFLDLWNTFLMEHHKRSIPRDTWNLLLDFGNMIADDMSNYDEEGAWPVLIDDFVEY 246          
BLAST of CX046753 vs. ExPASy Swiss-Prot
Match: DCNL2_MOUSE (DCN1-like protein 2 OS=Mus musculus GN=Dcun1d2 PE=2 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 7.764e-20
Identity = 63/213 (29.58%), Postives = 107/213 (50.23%), Query Frame = 1
Query:   73 NPESMKSPSLSNPLD---IFEIYRRFCEIKSQNADVCIE--DSYREDNESPKAKFSREALAELFN-----------LVESTVHIRIFVFDELFKLMSQLDL-MGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYR-VSGSKENP 657
            NPE+    S+ + +D   + ++Y R+ + + +N  + I+    + +D     A  S   +A  F             V+    +     + L  L+ +L+  + D ++F   Y F F   +  GQK + +  AV  W+LVL+GRF+ L+ W  F+  + + +I  DTW  +L F   + ++L  YD EGAWPVLIDDFVE+    V+G + +P
Sbjct:   47 NPEAFHRESMKSSVDQKKLEQLYSRYKDPQDENK-IGIDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSKKEFVDGMTELGCDSTERLKALLPRLEQELKDPAKFKDLYQFTFTFAKNPGQKGLDLEMAVAYWKLVLSGRFKFLDLWNTFLLEHHKRSIPRDTWNLLLDFGNMIADDLSNYDEEGAWPVLIDDFVEYARPVVTGGRRSP 258          
BLAST of CX046753 vs. ExPASy Swiss-Prot
Match: DCNL1_MOUSE (DCN1-like protein 1 OS=Mus musculus GN=Dcun1d1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.853e-19
Identity = 48/124 (38.71%), Postives = 72/124 (58.06%), Query Frame = 1
Query:  292 DELFKLMSQLDLMG----DFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMY-RVSGSK 648
            D + KL +Q+  M     +   F  FY F F   +  GQK + +  A+  W LVL GRF+ L+ W  F+  + + +I +DTW  +L FS  + +++  YD EGAWPVLIDDFVE    +++G+K
Sbjct:  132 DSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSSMIADDMSNYDEEGAWPVLIDDFVEFARPQIAGTK 255          
BLAST of CX046753 vs. ExPASy Swiss-Prot
Match: DCNL1_HUMAN (DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.853e-19
Identity = 48/124 (38.71%), Postives = 72/124 (58.06%), Query Frame = 1
Query:  292 DELFKLMSQLDLMG----DFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMY-RVSGSK 648
            D + KL +Q+  M     +   F  FY F F   +  GQK + +  A+  W LVL GRF+ L+ W  F+  + + +I +DTW  +L FS  + +++  YD EGAWPVLIDDFVE    +++G+K
Sbjct:  132 DSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEFARPQIAGTK 255          
BLAST of CX046753 vs. ExPASy Swiss-Prot
Match: DCNL1_CHICK (DCN1-like protein 1 OS=Gallus gallus GN=DCUN1D1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.853e-19
Identity = 48/124 (38.71%), Postives = 72/124 (58.06%), Query Frame = 1
Query:  292 DELFKLMSQLDLMG----DFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMY-RVSGSK 648
            D + KL +Q+  M     +   F  FY F F   +  GQK + +  A+  W LVL GRF+ L+ W  F+  + + +I +DTW  +L FS  + +++  YD EGAWPVLIDDFVE    +++G+K
Sbjct:  132 DSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEFARPQIAGTK 255          
BLAST of CX046753 vs. ExPASy Swiss-Prot
Match: DCN1L_DICDI (DCN1-like protein 1 OS=Dictyostelium discoideum GN=DDB_G0290025 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.607e-17
Identity = 42/105 (40.00%), Postives = 64/105 (60.95%), Query Frame = 1
Query:  310 MSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEH 624
            +S  DL  + S F  FY FVF + +   QKN+++   +  W +VL  +F  L  W DF+ ++ +  IS+DTW   L F +  ++++  YD EGAWPVLID+FVE+
Sbjct:  140 LSSKDLNNN-SAFKEFYMFVFDLGKAENQKNVSLQMCIELWTIVLKSKFDNLQIWFDFLNKHHKLAISKDTWNLFLDFVKIANDSITKYDSEGAWPVLIDEFVEY 243          
BLAST of CX046753 vs. ExPASy Swiss-Prot
Match: DCNL5_RAT (DCN1-like protein 5 OS=Rattus norvegicus GN=Dcun1d5 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.858e-14
Identity = 38/110 (34.55%), Postives = 63/110 (57.27%), Query Frame = 1
Query:  304 KLMSQLDLM----GDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVE 621
            KL S+ D +     D S F   Y + F   R+  Q+++ +  A +   L+L   + L + +  ++E+++   +++D W  VL FSR VH +L  YD +GAWPVL+D+FVE
Sbjct:  120 KLQSRFDFLRSQLNDISSFKNIYRYAFDFARDKDQRSLDIDTAKSMLALLLGRTWPLFSVFYQYLEQSKYRVMNKDQWYNVLEFSRTVHADLSNYDEDGAWPVLLDEFVE 229          
BLAST of CX046753 vs. ExPASy Swiss-Prot
Match: DCNL5_MOUSE (DCN1-like protein 5 OS=Mus musculus GN=Dcun1d5 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.858e-14
Identity = 38/110 (34.55%), Postives = 63/110 (57.27%), Query Frame = 1
Query:  304 KLMSQLDLM----GDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVE 621
            KL S+ D +     D S F   Y + F   R+  Q+++ +  A +   L+L   + L + +  ++E+++   +++D W  VL FSR VH +L  YD +GAWPVL+D+FVE
Sbjct:  120 KLQSRFDFLRSQLNDISSFKNIYRYAFDFARDKDQRSLDIDTAKSMLALLLGRTWPLFSVFYQYLEQSKYRVMNKDQWYNVLEFSRTVHADLSNYDEDGAWPVLLDEFVE 229          
BLAST of CX046753 vs. ExPASy Swiss-Prot
Match: DCNL5_HUMAN (DCN1-like protein 5 OS=Homo sapiens GN=DCUN1D5 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.366e-14
Identity = 37/110 (33.64%), Postives = 63/110 (57.27%), Query Frame = 1
Query:  304 KLMSQLDLM----GDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVE 621
            KL ++ D +     D S F   Y + F   R+  Q+++ +  A +   L+L   + L + +  ++E+++   +++D W  VL FSR VH +L  YD +GAWPVL+D+FVE
Sbjct:  120 KLQNKFDFLRSQLNDISSFKNIYRYAFDFARDKDQRSLDIDTAKSMLALLLGRTWPLFSVFYQYLEQSKYRVMNKDQWYNVLEFSRTVHADLSNYDEDGAWPVLLDEFVE 229          
The following BLAST results are available for this feature:
BLAST of CX046753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
DCN1L_DROME1.083e-2142.11DCN1-like protein OS=Drosophila melanogaster GN=CG... [more]
DCNL2_HUMAN1.564e-2030.00DCN1-like protein 2 OS=Homo sapiens GN=DCUN1D2 PE=... [more]
DCNL2_MOUSE7.764e-2029.58DCN1-like protein 2 OS=Mus musculus GN=Dcun1d2 PE=... [more]
DCNL1_MOUSE3.853e-1938.71DCN1-like protein 1 OS=Mus musculus GN=Dcun1d1 PE=... [more]
DCNL1_HUMAN3.853e-1938.71DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=... [more]
DCNL1_CHICK3.853e-1938.71DCN1-like protein 1 OS=Gallus gallus GN=DCUN1D1 PE... [more]
DCN1L_DICDI3.607e-1740.00DCN1-like protein 1 OS=Dictyostelium discoideum GN... [more]
DCNL5_RAT2.858e-1434.55DCN1-like protein 5 OS=Rattus norvegicus GN=Dcun1d... [more]
DCNL5_MOUSE2.858e-1434.55DCN1-like protein 5 OS=Mus musculus GN=Dcun1d5 PE=... [more]
DCNL5_HUMAN6.366e-1433.64DCN1-like protein 5 OS=Homo sapiens GN=DCUN1D5 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10A04_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10A04-B7-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046753 ID=CX046753; Name=CX046753; organism=Citrus sinensis; type=EST; length=828bp
CACACACTCACTTTGATCCTTCTTAGATAGGCGTTAAAGAAGTGTAAAGC
CTAGCTGGGTCTCGGCTCCGATAACCCAGAATCCATGAAATCACCTTCCC
TTTCTAATCCTCTTGATATCTTCGAGATTTACCGACGGTTTTGCGAAATT
AAATCTCAAAATGCAGATGTTTGTATAGAGGACAGTTATAGAGAAGACAA
TGAATCCCCAAAGGCCAAATTTTCCAGGGAGGCATTGGCTGAGCTATTTA
ACTTGGTTGAGTCAACTGTACATATAAGGATTTTTGTTTTTGATGAACTA
TTCAAGCTCATGTCACAGCTAGACTTGATGGGTGACTTTTCTGAATTTTC
GCGCTTCTATGATTTTGTTTTCTTCATGTGCCGTGAAAATGGTCAAAAGA
ATATAACCGTAAGCAGAGCGGTCACTGCCTGGAGATTAGTCTTAGCTGGG
AGATTTCGGTTACTTAACCAATGGTGTGACTTTGTTGAGAGAAATCAGCG
ACATAACATCTCTGAGGATACTTGGCAGCAAGTTTTAGCATTCAGCCGGT
GTGTACATGAAAATTTGGAAGGGTATGATCCTGAAGGTGCTTGGCCTGTC
CTTATAGATGACTTCGTGGAGCATATGTACAGAGTATCAGGATCTAAGGA
AAATCCCGGCTTATTTTGTAGCTGTGGTGATTCAGAATCCCAATCTTGTG
GATATGAGGACTCTCTTCCTGGATTGAAAATTTTTCCGGGTTTGAAGAGG
AAGTCATCTGGCATAGAACAAGATGAAATGGAGTCTTCAGATGCTCATAT
CCCTGAATTAACAGACCACAATCACATA
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