CX046751

Overview
NameCX046751
Unique NameCX046751
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10886 contig Csv1_Contig10886:670..1489. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALX_SOYBN (Calnexin homolog OS=Glycine max PE=2 SV=1)

HSP 1 Score: 375.941 bits (964), Expect = 1.450e-103
Identity = 182/274 (66.42%), Postives = 202/274 (73.72%), Query Frame = 2
Query:    2 DGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFELDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPKFDV-XXXXXXXXXXXXGSDGLAGFQKTVFDLLYKVADIPFLDAYKLKIIDVIEKGEKQPNLTIGILV 820
            DGEEK+KANFL+++DF+PPLI                  RAKIPDP AVKPDDWDEDAPMEI DE+A KPEGWL           ATKP            APKI+NPKCEAAPGCGEWKRP KRNPAYKGKW AP IDNP+YKGIWKP++IPNP YFEL KPDFEPIAA+GIEIWTMQDGILFDN+LI+ D+KVAESYR + WKPKF V             GSDG++GFQK VFDLLYK+ADIPFL  +K KI D+IEK EKQPNLTIGILV
Sbjct:  207 DGEEKKKANFLSSEDFEPPLIPSKTIPDPDDKKPEDWDERAKIPDPSAVKPDDWDEDAPMEILDEEAEKPEGWLDDEPEEIDDPEATKPEDWDDEEDGEWEAPKIENPKCEAAPGCGEWKRPTKRNPAYKGKWSAPYIDNPSYKGIWKPREIPNPEYFELAKPDFEPIAAIGIEIWTMQDGILFDNVLIANDDKVAESYRETTWKPKFTVEKDKLKAEEEAATGSDGISGFQKKVFDLLYKIADIPFLSEHKSKIFDLIEKAEKQPNLTIGILV 480          
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALX1_ARATH (Calnexin homolog 1 OS=Arabidopsis thaliana GN=CNX1 PE=1 SV=1)

HSP 1 Score: 370.933 bits (951), Expect = 4.663e-102
Identity = 180/274 (65.69%), Postives = 202/274 (73.72%), Query Frame = 2
Query:    2 DGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFELDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPKFDVXXXXXXXXXXXXGS-DGLAGFQKTVFDLLYKVADIPFLDAYKLKIIDVIEKGEKQPNLTIGILV 820
            DGEEK+KAN L+ +DF+P LI                  RAKIPDP+AVKP+DWDEDAPMEIEDE+A KPEGWL           ATKP            APKIDNPKCEAAPGCGEWKRPMKRNPAYKGKW +PLIDNP YKGIWKP+ IPNP+YFELD+PD+EPIAA+GIEIWTMQDGILFDNILI+KDEKVAE+YR + WKPKFDV            GS DGL  +QK VFDLL KVAD+ FL AYK KI ++IEK E+QPNLTIG+LV
Sbjct:  198 DGEEKKKANLLSGEDFEPALIPAKTIPDPEDKKPEDWDERAKIPDPNAVKPEDWDEDAPMEIEDEEAEKPEGWLDDEPEEVDDPEATKPEDWDDEEDGMWEAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWSSPLIDNPAYKGIWKPRDIPNPDYFELDRPDYEPIAAIGIEIWTMQDGILFDNILIAKDEKVAETYRQTTWKPKFDVEKEKQKAEEEAAGSADGLKSYQKVVFDLLNKVADLSFLSAYKSKITELIEKAEQQPNLTIGVLV 471          
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALX2_ARATH (Calnexin homolog 2 OS=Arabidopsis thaliana GN=At5g07340 PE=2 SV=2)

HSP 1 Score: 368.237 bits (944), Expect = 3.023e-101
Identity = 178/274 (64.96%), Postives = 201/274 (73.36%), Query Frame = 2
Query:    2 DGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFELDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPKFDVXXXXXXXXXXXXG-SDGLAGFQKTVFDLLYKVADIPFLDAYKLKIIDVIEKGEKQPNLTIGILV 820
            DGEEK+K N L+A+DF+PPLI                  RAKIPDP+AVKPDDWDEDAPMEIEDE+A KPEGWL           A+KP            APK+ N KCEAAPGCGEWKRPMKRNPAYKGKW +PLIDNP YKGIWKP+ IPNP+YFEL++P+ EPIAA+GIEIWTMQDGILFDNILISKDEKVAE+YR S WKPKFDV            G +DGL  +QK VFDLLYKVADI FL AYK KI+++IEK E QPNLTIG+L+
Sbjct:  200 DGEEKKKGNLLSAEDFEPPLIPSKTIPDPEDKKPEDWDERAKIPDPNAVKPDDWDEDAPMEIEDEEAEKPEGWLDDEPVEVEDPEASKPEDWDDEEDGEWEAPKVSNTKCEAAPGCGEWKRPMKRNPAYKGKWSSPLIDNPAYKGIWKPRDIPNPDYFELERPNLEPIAAIGIEIWTMQDGILFDNILISKDEKVAETYRQSTWKPKFDVEKEKQKAEDEAAGEADGLKSYQKKVFDLLYKVADISFLSAYKSKIMELIEKAETQPNLTIGVLI 473          
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALX_PEA (Calnexin homolog OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 1.716e-96
Identity = 172/280 (61.43%), Postives = 197/280 (70.36%), Query Frame = 2
Query:    2 DGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFELDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPKFDVXXXXXXXXXXXXG-------SDGLAGFQKTVFDLLYKVADIPFLDAYKLKIIDVIEKGEKQPNLTIGILV 820
            DGEEK+KANFL+++DF+P LI                  RAKIPDP+AVKP+DWDEDAP EI DE+A KPE WL             KP            APKI+NPKCEAAPGCGEWKRP K NPAYKGKW AP IDNPNYKGIWKPQ+IPNP YFEL+KPDFEPIAA+GIEIWTMQDGILFDN+LI+KD+K+AESYR + WKPKF++                    S+G+AG QK  FDLLYK+ADI FL   K KII++IEKGEKQPNLTIGI+V
Sbjct:  208 DGEEKKKANFLSSEDFEPALIPSKTIPDPDDKKPEDWDERAKIPDPEAVKPEDWDEDAPREIIDEEAEKPEPWLDHEPEVDDPE--AKPEDWDDEEDGEWEAPKIENPKCEAAPGCGEWKRPTKSNPAYKGKWSAPYIDNPNYKGIWKPQEIPNPEYFELEKPDFEPIAAIGIEIWTMQDGILFDNVLIAKDDKIAESYRETTWKPKFNIEKEKQKHEEEAAAAAAARSESEGIAGIQKKAFDLLYKIADIAFLSGQKEKIIEIIEKGEKQPNLTIGIIV 485          
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALX_HELTU (Calnexin homolog OS=Helianthus tuberosus PE=2 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 3.244e-87
Identity = 157/279 (56.27%), Postives = 190/279 (68.10%), Query Frame = 2
Query:    2 DGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFELDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAE------SYRASAWKPKFDVXXXXXXXXXXXXGSDGLAGFQKTVFDLLYKVADIPFLDAYKLKIIDVIEKGEKQPNLTIGILV 820
            DGEEK+KANFL+++DF+P LI                  RAKIPDP+A KPDDWDEDAPMEI DE+A KPEGWL           A KP            AP+I+NPKCE+APGCGEW+RP+KRNPAYKGKWHAPLIDNP YKGIWKP++IPNP+YFEL+KP+FEPIAA+GIE    QDGILFDNILI+ DEK A         R+  WK +                 DGL G QK VFD+LYK+AD+PFL  +K+K++++IEK E QPN+TIG++V
Sbjct:  202 DGEEKKKANFLSSEDFEPALIPTKTIPDPDDKKPEDWDERAKIPDPEATKPDDWDEDAPMEILDEEAEKPEGWLDDEPEEIDDPEAVKPEDWDDEEDGEWEAPQIENPKCESAPGCGEWRRPLKRNPAYKGKWHAPLIDNPAYKGIWKPREIPNPDYFELEKPNFEPIAAIGIEDLDQQDGILFDNILIASDEKTAAKSGILLGSRSLRWKKR------NRRLKKNQPLLDGLKGIQKAVFDVLYKIADLPFLGDHKVKVLELIEKAETQPNITIGVIV 474          
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALX_ASPFU (Calnexin homolog OS=Aspergillus fumigatus GN=AFUA_4G12850 PE=2 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.428e-50
Identity = 103/211 (48.82%), Postives = 117/211 (55.45%), Query Frame = 2
Query:    2 DGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFELDKP-DFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPKFDV 631
            DGE  +    L  +DF PP+                    AKIPDP+A KPDDWDEDAP EI DE+A  PE WL           A KP             P + NPKC    GCG W  PMK+NPAYKGKW APLIDNP YKGIWKP++IPNP YFE   P +FEP+ AVG EIWTMQ+ ILFDNI I    + AE  R   +  K  V
Sbjct:  230 DGEAVKNGTLL--EDFAPPVNPEKEIDDPKDKKPADWVDEAKIPDPEAKKPDDWDEDAPYEIVDEEATMPEDWLEDEPTSIPDPEAEKPEDWDDEEDGDWIPPTVPNPKCNEVSGCGPWTPPMKKNPAYKGKWTAPLIDNPAYKGIWKPRKIPNPAYFEDKTPSNFEPMGAVGFEIWTMQNDILFDNIYIGHSIEDAEKLRKETFDLKHPV 438          
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALX_MOUSE (Calnexin OS=Mus musculus GN=Canx PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.410e-50
Identity = 89/166 (53.61%), Postives = 110/166 (66.27%), Query Frame = 2
Query:  119 RAKIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFE-LDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAW 613
            R KI DPDAVKPDDWDEDAP +I DE+A KPEGWL           A KP            AP+I NPKCE+APGCG W+RPM  NP YKGKW  P+IDNPNY+GIWKP++IPNP++FE L+     P +A+G+E+W+M   I FDN +IS D +V + +    W
Sbjct:  291 RPKIADPDAVKPDDWDEDAPSKIPDEEATKPEGWLDDEPEYIPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPMIDNPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPFSAIGLELWSMTSDIFFDNFIISGDRRVVDDWANDGW 456          
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALX_RAT (Calnexin OS=Rattus norvegicus GN=Canx PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.066e-50
Identity = 89/166 (53.61%), Postives = 110/166 (66.27%), Query Frame = 2
Query:  119 RAKIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFE-LDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAW 613
            R KI DPDAVKPDDWDEDAP +I DE+A KPEGWL           A KP            AP+I NPKCE+APGCG W+RPM  NP YKGKW  P+IDNPNY+GIWKP++IPNP++FE L+     P +A+G+E+W+M   I FDN +IS D +V + +    W
Sbjct:  291 RPKIADPDAVKPDDWDEDAPSKIPDEEATKPEGWLDDEPEYIPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPMIDNPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIISGDRRVVDDWANDGW 456          
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALX_CANFA (Calnexin OS=Canis familiaris GN=CANX PE=1 SV=3)

HSP 1 Score: 195.667 bits (496), Expect = 2.685e-49
Identity = 86/166 (51.81%), Postives = 110/166 (66.27%), Query Frame = 2
Query:  119 RAKIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFE-LDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAW 613
            R KIPDPDAVKPDDW+EDAP +I DE+A KP+GWL           A KP            AP+I NPKCE+APGCG W+RPM  NP YKGKW  P+IDNPNY+GIWKP++IPNP++FE L+     P +A+G+E+W+M   I FDN ++  D +V + +    W
Sbjct:  291 RPKIPDPDAVKPDDWNEDAPAKIPDEEATKPDGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPMIDNPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPFSAIGLELWSMTSDIFFDNFIVCGDRRVVDDWANDGW 456          
BLAST of CX046751 vs. ExPASy Swiss-Prot
Match: CALX_PONAB (Calnexin OS=Pongo abelii GN=CANX PE=2 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 3.507e-49
Identity = 86/166 (51.81%), Postives = 110/166 (66.27%), Query Frame = 2
Query:  119 RAKIPDPDAVKPDDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPNYFE-LDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAW 613
            R KIPDP+AVKPDDWDEDAP +I DE+A KPEGWL           A KP            AP+I NPKCE+APGCG W+RPM  NP YKGKW  P+IDNP+Y+GIWKP++IPNP++FE L+     P +A+G+E+W+M   I FDN +I  D ++ + +    W
Sbjct:  290 RPKIPDPEAVKPDDWDEDAPAKIPDEEATKPEGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPMIDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICADRRIVDDWANDGW 455          
The following BLAST results are available for this feature:
BLAST of CX046751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
CALX_SOYBN1.450e-10366.42Calnexin homolog OS=Glycine max PE=2 SV=1[more]
CALX1_ARATH4.663e-10265.69Calnexin homolog 1 OS=Arabidopsis thaliana GN=CNX1... [more]
CALX2_ARATH3.023e-10164.96Calnexin homolog 2 OS=Arabidopsis thaliana GN=At5g... [more]
CALX_PEA1.716e-9661.43Calnexin homolog OS=Pisum sativum PE=2 SV=1[more]
CALX_HELTU3.244e-8756.27Calnexin homolog OS=Helianthus tuberosus PE=2 SV=1[more]
CALX_ASPFU2.428e-5048.82Calnexin homolog OS=Aspergillus fumigatus GN=AFUA_... [more]
CALX_MOUSE5.410e-5053.61Calnexin OS=Mus musculus GN=Canx PE=1 SV=1[more]
CALX_RAT7.066e-5053.61Calnexin OS=Rattus norvegicus GN=Canx PE=1 SV=1[more]
CALX_CANFA2.685e-4951.81Calnexin OS=Canis familiaris GN=CANX PE=1 SV=3[more]
CALX_PONAB3.507e-4951.81Calnexin OS=Pongo abelii GN=CANX PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10A03_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10A03-B5-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046751 ID=CX046751; Name=CX046751; organism=Citrus sinensis; type=EST; length=820bp
TGATGGAGAGGAGAAGCAGAAGGCAAATTTCCTCGCTGCTGATGATTTTC
AGCCACCGCTCATTCCTGAGAAGACAATTCCTGATCCAGATGACAAGAAG
CCTGAGGATTGGGATGAGAGGGCAAAGATTCCTGACCCTGATGCAGTAAA
ACCTGACGACTGGGATGAGGATGCTCCGATGGAAATTGAAGATGAGGATG
CTGTGAAACCTGAAGGATGGCTGGATGATGAGCCTGAGGAGATAGATGAC
CCTGAGGCCACAAAACCTGAGGATTGGGATGATGAGGAGGATGGTGAATG
GGAGGCCCCAAAGATTGATAACCCAAAGTGTGAAGCAGCCCCTGGATGCG
GCGAGTGGAAGAGGCCAATGAAGAGGAATCCTGCCTACAAGGGCAAATGG
CATGCTCCACTTATTGACAACCCTAATTACAAGGGTATTTGGAAGCCTCA
GCAGATTCCAAACCCCAACTATTTTGAGCTTGACAAACCTGACTTTGAGC
CTATTGCTGCTGTCGGCATTGAGATCTGGACAATGCAGGATGGTATTTTG
TTTGACAACATTTTGATATCAAAGGATGAGAAAGTTGCAGAGTCCTATCG
GGCTTCTGCATGGAAGCCTAAGTTTGATGTTGAGAAAGAGAAACTGAAGG
CTGAGGAAGCAGCTGCTGGTTCAGATGGCCTTGCAGGCTTCCAGAAGACG
GTATTTGATCTCTTGTACAAGGTTGCAGACATTCCTTTCTTGGATGCATA
CAAACTTAAGATCATTGATGTGATTGAGAAGGGAGAGAAACAACCAAACC
TTACAATTGGTATCCTTGTC
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