DN617892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU1_SOYBN (Elongation factor Tu, chloroplastic OS=Glycine max GN=TUFA PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 1.521e-44 Identity = 87/92 (94.57%), Postives = 91/92 (98.91%), Query Frame = -2 Query: 259 IVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 534 IVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTG+V+SIMNDKDEES MV+PGDRVKMVVELI+PVACEQGMRFAIREGGKTVGAGVIQSIIE Sbjct: 388 IVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESTMVLPGDRVKMVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 479
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU2_SOYBN (Elongation factor Tu, chloroplastic OS=Glycine max GN=TUFB1 PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.986e-44 Identity = 86/92 (93.48%), Postives = 91/92 (98.91%), Query Frame = -2 Query: 259 IVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 534 IVYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTG+V+ IMNDKDEESKMVMPGDRVK+VVELI+PVACEQGMRFAIREGGKTVGAGVIQSIIE Sbjct: 388 IVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKVTEIMNDKDEESKMVMPGDRVKLVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 479
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_ARATH (Elongation factor Tu, chloroplastic OS=Arabidopsis thaliana GN=TUFA PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 3.746e-43 Identity = 83/92 (90.22%), Postives = 90/92 (97.83%), Query Frame = -2 Query: 259 IVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 534 I+YVLKKEEGGRHSPFFAGYRPQFYMRTTDVTG+V+ IMNDKDEESKMVMPGDRVK+VVELI+PVACEQGMRFAIREGGKTVGAGVI +I+E Sbjct: 385 IIYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTKIMNDKDEESKMVMPGDRVKIVVELIVPVACEQGMRFAIREGGKTVGAGVIGTILE 476
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_PEA (Elongation factor Tu, chloroplastic OS=Pisum sativum GN=tufA PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 8.345e-43 Identity = 85/92 (92.39%), Postives = 90/92 (97.83%), Query Frame = -2 Query: 259 IVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 534 IVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTG+V+SIMNDKDEESKMVMPGDRVK+VVELI+PVA EQGMRFAIREGGKTVGAGVI +IIE Sbjct: 397 IVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESKMVMPGDRVKIVVELIVPVAIEQGMRFAIREGGKTVGAGVIGAIIE 488
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTUB_NICSY (Elongation factor TuB, chloroplastic OS=Nicotiana sylvestris GN=TUFB PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 1.859e-42 Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = -2 Query: 259 IVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 534 +VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTG+V+ IM+DK EESKMVMPGDRV MVVELIMPVACEQGMRFAIREGGKTVGAGVIQ I+E Sbjct: 394 LVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTVIMSDKGEESKMVMPGDRVNMVVELIMPVACEQGMRFAIREGGKTVGAGVIQKILE 485
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_TOBAC (Elongation factor Tu, chloroplastic OS=Nicotiana tabacum GN=TUFA PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 4.142e-42 Identity = 83/92 (90.22%), Postives = 87/92 (94.57%), Query Frame = -2 Query: 259 IVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 534 IVYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTG+V+SI DK EESKMVMPGDRV +VVELIMPVACEQGMRFAIREGGKTVGAGVIQ IIE Sbjct: 387 IVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKVTSITTDKGEESKMVMPGDRVNLVVELIMPVACEQGMRFAIREGGKTVGAGVIQKIIE 478
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTUA_NICSY (Elongation factor TuA, chloroplastic OS=Nicotiana sylvestris GN=TUFA PE=2 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 4.142e-42 Identity = 83/92 (90.22%), Postives = 87/92 (94.57%), Query Frame = -2 Query: 259 IVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 534 IVYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTG+V+SI DK EESKMVMPGDRV +VVELIMPVACEQGMRFAIREGGKTVGAGVIQ IIE Sbjct: 387 IVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKVTSITTDKGEESKMVMPGDRVNLVVELIMPVACEQGMRFAIREGGKTVGAGVIQKIIE 478
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_OSTTA (Elongation factor Tu, chloroplastic OS=Ostreococcus tauri GN=tufA PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.290e-35 Identity = 68/91 (74.73%), Postives = 82/91 (90.11%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFF GYRPQFY+RTTDVTG++ S ++D+ +E+ MVMPGDRVKMVVELI P+A E GMRFAIREGG+TVGAGV+ SI++ Sbjct: 319 VYVLKKEEGGRHTPFFPGYRPQFYVRTTDVTGKIESFISDEGDEATMVMPGDRVKMVVELIQPIAIENGMRFAIREGGRTVGAGVVSSILK 409
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_SYNJB (Elongation factor Tu OS=Synechococcus sp. GN=tuf PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.427e-34 Identity = 68/91 (74.73%), Postives = 78/91 (85.71%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG +SS D + +MVMPGDRVKM VELI P+A EQGMRFAIREGG+TVGAGV+ I++ Sbjct: 319 VYVLKKEEGGRHTPFFAGYRPQFYVRTTDVTGTISSFTADDGSQPEMVMPGDRVKMTVELIQPIAIEQGMRFAIREGGRTVGAGVVSKILK 409
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_EUGGR (Elongation factor Tu, chloroplastic OS=Euglena gracilis GN=tufA PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 5.422e-34 Identity = 65/91 (71.43%), Postives = 79/91 (86.81%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VY+L KEEGGRH+PFF GYRPQFY+RTTDVTG++ S +D D ++MVMPGDR+KM VELI P+A E+GMRFAIREGG+TVGAGV+ SII+ Sbjct: 319 VYILTKEEGGRHTPFFEGYRPQFYVRTTDVTGKIESFRSDNDNPAQMVMPGDRIKMKVELIQPIAIEKGMRFAIREGGRTVGAGVVLSIIQ 409 The following BLAST results are available for this feature:
BLAST of DN617892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617892 ID=DN617892; Name=DN617892; organism=Citrus sinensis; type=EST; length=535bpback to top |