DN617888

Overview
NameDN617888
Unique NameDN617888
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3693 contig Csv1_Contig3693:16..638. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617888 vs. ExPASy Swiss-Prot
Match: FZR2_ARATH (Protein FIZZY-RELATED 2 OS=Arabidopsis thaliana GN=FZR2 PE=1 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 8.929e-64
Identity = 130/201 (64.68%), Postives = 151/201 (75.12%), Query Frame = 3
Query:   39 SAMDDPTESPQLNLPPTMSLQPLTPPSDHISRMINANHHQSPS-----RAIYSDRFIPSRSSSNFDLFNISQPSPNSPAVADSHKDDNSGTYTALLRAALFGPETPEKKDVLGPPSGRNIFRFKSETRRSLHSLSPFGFDDDVASGVSHS-PVKAPRKVPRSPYKILDAPALQDDFYLNLVDWSAHNVLAVGLGNCVYLWN 623
            + + +   S   NL P M+  P+      I+R+INAN  QSPS     R+IYSDRFIPSRS SNF LF++S PSP+        K+D +G+Y  LLRAA+FGPETPEK+D+ G  S RNIFRFK+ET RSL+S SPFG DDD + GVSHS PVKAPRKVPRSPYK+LDAPALQDDFYLNLVDWSA NVLAVGLGNCVYLWN
Sbjct:   10 NVITNSNSSSMRNLSPAMNT-PVVSLESRINRLINANQSQSPSPSSLSRSIYSDRFIPSRSGSNFALFDLS-PSPSKDG-----KEDGAGSYATLLRAAMFGPETPEKRDITGFSSSRNIFRFKTETHRSLNSFSPFGVDDD-SPGVSHSGPVKAPRKVPRSPYKVLDAPALQDDFYLNLVDWSAQNVLAVGLGNCVYLWN 202          
BLAST of DN617888 vs. ExPASy Swiss-Prot
Match: FZR1_ARATH (Protein FIZZY-RELATED 1 OS=Arabidopsis thaliana GN=FZR1 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 9.240e-61
Identity = 121/187 (64.71%), Postives = 145/187 (77.54%), Query Frame = 3
Query:   69 QLNLPPTMSLQPLTPPSDHISRMINANHHQSPSRAIYSDRFIPSRSSSNFDLFNISQPSPNSPAVADSHKDDNSGTYTALLRAALFGPETPEKKDVLG--PPSGRNIFRFKSETRRSLHSLSPFGFDDDVASGVSHSPVKAPRKVPRSPYKILDAPALQDDFYLNLVDWSAHNVLAVGLGNCVYLWN 623
            QLNLPP+M+ +P       I+R+I++NH+ SPS+ IYSDRFIPSRS SNF LF+++  SPN        K+D +G+Y +LL+ ALFGP TPEK DV+    PSG NIFRFK+ET+RSL+   PF  D DV SGVS SPVK+PRK+ RSPYK+LDAPALQDDFYLNLVDWSA NVLAVGLGNCVYLWN
Sbjct:   16 QLNLPPSMN-RPTVSLESRINRLIDSNHYHSPSKPIYSDRFIPSRSGSNFALFDLASSSPNKK----DGKEDGAGSYASLLKTALFGPVTPEKSDVVNGFSPSG-NIFRFKTETQRSLNLYPPF--DSDVVSGVSPSPVKSPRKILRSPYKVLDAPALQDDFYLNLVDWSAQNVLAVGLGNCVYLWN 194          
BLAST of DN617888 vs. ExPASy Swiss-Prot
Match: FZR3_ARATH (Protein FIZZY-RELATED 3 OS=Arabidopsis thaliana GN=FZR3 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.220e-30
Identity = 83/198 (41.92%), Postives = 111/198 (56.06%), Query Frame = 3
Query:   72 LNLPPTMSLQPLTPPSDHISRMINANHHQSPSRAIYSDRFIPSRSSSNFDLFNISQPSPNSPAVADSHKDDNSGTYTALLRAALFGPETPEKKDVLGPPSGR-----------NIFRFKSETRRSLHSLSPFG----FDDDVASGVSHSPVKAPRKVPRSPYKILDAPALQDDFYLNLVDWSAHNVLAVGLGNCVYLW 620
            LNLP  M+   L   +   S     +   SPS++  SDRFIP RSSS    F++    P +P      K+  +  Y+ LL++ LFG +      +L P  G+           N+ RFK++   S  S SPF      +D+  S  S  P K PRKVP++P+K+LDAP+LQDDFYLN+VDWS+ NVLAVGLG CVYLW
Sbjct:   11 LNLPAGMNQTSLRLET-FSSSFRGISSLSSPSKSTCSDRFIPCRSSSRLHAFDLQDKEPTTPV-----KEGGNEAYSRLLKSELFGSDFASP--LLSPAGGQGSASSPMSPCTNMLRFKTDRSNSSPS-SPFSPSILGNDNGHSSDSSPPPKPPRKVPKTPHKVLDAPSLQDDFYLNVVDWSSQNVLAVGLGTCVYLW 199          
BLAST of DN617888 vs. ExPASy Swiss-Prot
Match: FZR_HUMAN (Fizzy-related protein homolog OS=Homo sapiens GN=FZR1 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.150e-25
Identity = 75/194 (38.66%), Postives = 105/194 (54.12%), Query Frame = 3
Query:  105 LTPPSDHISRMINANHHQSPSRAIYSDRFIPSRS----SSNFDLFNISQPSPNSPAVADSHKDDNSG---TYTALLRAALFG--------PETPEKKDVLGPPSGRNIFRFKSETRRSL----HSLSPFGFD--DDVASGVSHSPVKAPRKVPRSPYKILDAPALQDDFYLNLVDWSAHNVLAVGLGNCVYLWN 623
            LTP S  +S         SPS+  + DRFIPSR+    S NF   N ++ SP+    A     DN      Y+ALL+  L G        P+T +++     P  + +F +   T+RS     + +SP+      + +  +  SP K  RK+ + P+K+LDAP LQDDFYLNLVDWS+ NVL+VGLG CVYLW+
Sbjct:   31 LTPASSPVS---------SPSK--HGDRFIPSRAGANWSVNFHRINENEKSPSQNRKAKDATSDNGKDGLAYSALLKNELLGAGIEKVQDPQTEDRRLQPSTPEKKGLFTYSLSTKRSSPDDGNDVSPYSLSPVSNKSQKLLRSPRKPTRKISKIPFKVLDAPELQDDFYLNLVDWSSLNVLSVGLGTCVYLWS 213          
BLAST of DN617888 vs. ExPASy Swiss-Prot
Match: FZR_MOUSE (Fizzy-related protein homolog OS=Mus musculus GN=Fzr1 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.394e-24
Identity = 73/194 (37.63%), Postives = 105/194 (54.12%), Query Frame = 3
Query:  105 LTPPSDHISRMINANHHQSPSRAIYSDRFIPSRS----SSNFDLFNISQPSPNSPAVADSHKDDNSG---TYTALLRAALFG--------PETPEKKDVLGPPSGRNIFRFKSETRRSL----HSLSPFGFD--DDVASGVSHSPVKAPRKVPRSPYKILDAPALQDDFYLNLVDWSAHNVLAVGLGNCVYLWN 623
            LTP +  +S         SPS+  + DRFIPSR+    S NF   N ++ SP+    A     DN      Y+ALL+  L G        P+T +++     P  + +F +   ++RS     + +SP+      + +  +  SP K  RK+ + P+K+LDAP LQDDFYLNLVDWS+ NVL+VGLG CVYLW+
Sbjct:   31 LTPANSPVS---------SPSK--HGDRFIPSRAGANWSVNFHRINENEKSPSQNRKAKDATSDNGKDGLAYSALLKNELLGAGIEKVQDPQTEDRRLQPSTPEHKGLFTYSLSSKRSSPDDGNDVSPYSLSPVSNKSQKLLRSPRKPTRKISKIPFKVLDAPELQDDFYLNLVDWSSLNVLSVGLGTCVYLWS 213          
BLAST of DN617888 vs. ExPASy Swiss-Prot
Match: MFR1_SCHPO (Meiotic fizzy-related protein 1 OS=Schizosaccharomyces pombe GN=mfr1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.112e-16
Identity = 56/152 (36.84%), Postives = 77/152 (50.66%), Query Frame = 3
Query:  183 DRFIPSRSSSNFDLFNISQPSPNSPAVADSHKDDNSGT----YTALLRAALFGPETPEKKDVLGPPSGRNIFRFKSETR-RSLHSLSPFGFDDDVASGVSHSPVKAPRKVPRSPYKILDAPALQDDFYLNLVDWSAHNVLAVGLGNCVYLWN 623
            DRFIP R+ SN   F+         +   + +   SGT    +  LL   LFG +    +        R I +   +T  R  +SLSP       +  +   P K  R  P++PYKILDAP L++DFYLNL+DW   NVLAVGL + +YLW+
Sbjct:    3 DRFIPIRNVSNEFNFSFQSFKECVLSHGSNLRRKTSGTIQRQFMELLSMELFGSQASRSRAFYYGEDKRKIEKKMLDTPDRKSYSLSPIS---PQSQDMLRQPQKPKRAFPKTPYKILDAPYLKNDFYLNLLDWGQSNVLAVGLASSIYLWS 151          
BLAST of DN617888 vs. ExPASy Swiss-Prot
Match: CDH1_DICDI (Anaphase-promoting complex subunit cdh1 OS=Dictyostelium discoideum GN=cdh1 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.494e-15
Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 3
Query:  393 KSETRRSLH-SLSPFGFD--DDVASGVSHSPVKAPRKVPRSPYKILDAPALQDDFYLNLVDWSAHNVLAVGLGNCVYLWN 623
            K ++  S H   SP+      D +  +  SP K  RK+ ++P KILDAP ++DDFYLNL+DWS+HN+LAVGL   VYLWN
Sbjct:  360 KQKSTMSNHLDCSPYSLSLLSDDSQKLLSSPRKPQRKISKTPIKILDAPMIKDDFYLNLIDWSSHNILAVGLDTSVYLWN 439          
BLAST of DN617888 vs. ExPASy Swiss-Prot
Match: CDC20_DICDI (Anaphase-promoting complex subunit cdc20 OS=Dictyostelium discoideum GN=cdc20 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.913e-14
Identity = 56/165 (33.94%), Postives = 84/165 (50.91%), Query Frame = 3
Query:  183 DRFIPSRSSSNFDLFNI----SQPSPNSPAVADSHKDDNSGTYTALLRAALFGPETPEKKDVLGPP-----SG---RNIFRFKSET-----RRSLHSLSPFGFDDDVASGVSHSPVKAP-RKVPRSPYKILDAPALQDDFYLNLVDWSAHNVLAVGLGNCVYLWN 623
            DRFIP++ + +   FN+    S P+PN+      + + ++ T T    +     E+   KD L        SG     I  FKS+        S +SL      + V S  +   +K   R++P+ P +ILDAP + DD+YLNL+DWS+ NV+A+ LG  VYLWN
Sbjct:   48 DRFIPNKMNIDIGHFNLTKENSNPNPNA-----INNNSSTSTSTTATSSTTNNIESTLYKDTLANQLFESNSGDLESKILSFKSKAPVGNVSSSTNSLRVLYSQNQVGSTPTDQSLKKQFRQIPQQPERILDAPDIVDDYYLNLLDWSSQNVIAIPLGQTVYLWN 207          
BLAST of DN617888 vs. ExPASy Swiss-Prot
Match: CDC20_RAT (Cell division cycle protein 20 homolog OS=Rattus norvegicus GN=Cdc20 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 3.560e-12
Identity = 57/171 (33.33%), Postives = 81/171 (47.37%), Query Frame = 3
Query:  141 NANHHQSPSRAIYSDRFIPSRSSSNFDLFNISQPSPNSPAVADSHKDDNSGTYTALLRAALFGPETPEKKDVLGPPSGRNIFRFKSETRRSLH-----SLSPFGFDDDVASGVSH-----SPVKAPRKVPRSPYKILDAPALQDDFYLNLVDWSAHNVLAVGLGNCVYLWN 623
            N+    +PS+    DR+IP RS+S  ++ +      N P        ++ GT              P KK+       RN+  F  E  + L        +P G+ + +    S      S  KA R +P  P +ILDAP +++D+YLNLVDWS+ NVLAV L N VYLWN
Sbjct:   64 NSKVQTTPSKP-GGDRYIPQRSASQMEVASFLLSKENQP--------EDGGT--------------PTKKEHQ-KAWARNLNGFDVEEAKILRLSGKPQNAPEGYQNRLKVLYSQKATPGSSRKACRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWN 210          
BLAST of DN617888 vs. ExPASy Swiss-Prot
Match: CDC20_MOUSE (Cell division cycle protein 20 homolog OS=Mus musculus GN=Cdc20 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.308e-11
Identity = 50/152 (32.89%), Postives = 70/152 (46.05%), Query Frame = 3
Query:  183 DRFIPSRSSSNFDLFNISQPSPNSPAVADSHKDDNSGTYTALLRAALFGPETPEKKDVLGPPSGRNIFRFKSETRRSLHSLSPFGFDDDVASGVSH-----SPVKAPRKVPRSPYKILDAPALQDDFYLNLVDWSAHNVLAVGLGNCVYLWN 623
            DRFIP RS+S  ++ +      N P   +         +       L G +  E K          I R   + + +     P G+ + +    S      S  K  R +P  P +ILDAP +++D+YLNLVDWS+ NVLAV L N VYLWN
Sbjct:   77 DRFIPQRSASQMEVASFLLSKENQP---EDRGTPTKKEHQKAWSLNLNGFDVEEAK----------ILRLSGKPQNA-----PEGYQNRLKVLYSQKATPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWN 210          
The following BLAST results are available for this feature:
BLAST of DN617888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
FZR2_ARATH8.929e-6464.68Protein FIZZY-RELATED 2 OS=Arabidopsis thaliana GN... [more]
FZR1_ARATH9.240e-6164.71Protein FIZZY-RELATED 1 OS=Arabidopsis thaliana GN... [more]
FZR3_ARATH2.220e-3041.92Protein FIZZY-RELATED 3 OS=Arabidopsis thaliana GN... [more]
FZR_HUMAN2.150e-2538.66Fizzy-related protein homolog OS=Homo sapiens GN=F... [more]
FZR_MOUSE1.394e-2437.63Fizzy-related protein homolog OS=Mus musculus GN=F... [more]
MFR1_SCHPO3.112e-1636.84Meiotic fizzy-related protein 1 OS=Schizosaccharom... [more]
CDH1_DICDI4.494e-1550.00Anaphase-promoting complex subunit cdh1 OS=Dictyos... [more]
CDC20_DICDI2.913e-1433.94Anaphase-promoting complex subunit cdc20 OS=Dictyo... [more]
CDC20_RAT3.560e-1233.33Cell division cycle protein 20 homolog OS=Rattus n... [more]
CDC20_MOUSE2.308e-1132.89Cell division cycle protein 20 homolog OS=Mus musc... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01N05_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001N05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617888 ID=DN617888; Name=DN617888; organism=Citrus sinensis; type=EST; length=623bp
CTAGAGTAGGGTTCCTCTGATCTGAGTAATAATTGTAATCGGCTATGGAC
GATCCCACGGAAAGTCCGCAGCTGAATCTCCCACCGACAATGTCGCTTCA
ACCACTGACCCCACCGTCGGATCACATCAGCCGCATGATCAACGCCAACC
ACCATCAGTCGCCGTCGCGAGCAATTTACTCCGACAGGTTCATTCCCAGC
AGATCTAGCTCAAATTTCGACCTTTTCAACATCTCGCAGCCGTCGCCCAA
CTCTCCGGCTGTTGCCGACTCCCACAAGGACGATAACTCCGGGACCTACA
CGGCGCTGCTCCGGGCTGCACTCTTCGGTCCCGAGACGCCCGAAAAAAAG
GATGTGTTGGGGCCGCCATCGGGCAGGAATATTTTTAGATTTAAATCGGA
GACTAGGCGGTCCTTGCACTCGCTTTCGCCTTTTGGGTTCGATGATGACG
TGGCGTCTGGTGTCAGTCATAGCCCAGTCAAAGCTCCCAGGAAGGTCCCT
AGGTCGCCTTATAAAATTCTGGATGCACCAGCATTGCAAGATGATTTTTA
CTTGAACTTAGTGGACTGGTCGGCGCATAATGTGTTGGCTGTGGGGTTGG
GGAATTGTGTGTATTTGTGGAAT
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