DN617887
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_MOUSE (WD repeat-containing protein 48 OS=Mus musculus GN=Wdr48 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.280e-21 Identity = 59/165 (35.76%), Postives = 92/165 (55.76%), Query Frame = 3 Query: 141 AGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGS-CSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 629 A ++ +T R++ +++YV+ + + + G+N L + ++ LFT RD ++ WS+ A+ E H DWVND VL TL+S SSDTT+K WN + G C+ TLR H DYV LA A K+ +VAS GL ++F+WD+ A + S + + Sbjct: 2 AAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNAL-----QLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWN-AHKGFCMSTLRTHKDYVKALAYA-KDKELVASAGLDRQIFLWDVNTLTALTASNNTV 159
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_PONAB (WD repeat-containing protein 48 OS=Pongo abelii GN=WDR48 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.284e-21 Identity = 59/165 (35.76%), Postives = 92/165 (55.76%), Query Frame = 3 Query: 141 AGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGS-CSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 629 A ++ +T R++ +++YV+ + + + G+N L + ++ LFT RD ++ WS+ A+ E H DWVND VL TL+S SSDTT+K WN + G C+ TLR H DYV LA A K+ +VAS GL ++F+WD+ A + S + + Sbjct: 2 AAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNAL-----QLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWN-AHKGFCMSTLRTHKDYVKALAYA-KDKELVASAGLDRQIFLWDVNTLTALTASNNTV 159
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_MACFA (WD repeat-containing protein 48 OS=Macaca fascicularis GN=WDR48 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.284e-21 Identity = 59/165 (35.76%), Postives = 92/165 (55.76%), Query Frame = 3 Query: 141 AGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGS-CSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 629 A ++ +T R++ +++YV+ + + + G+N L + ++ LFT RD ++ WS+ A+ E H DWVND VL TL+S SSDTT+K WN + G C+ TLR H DYV LA A K+ +VAS GL ++F+WD+ A + S + + Sbjct: 2 AAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNAL-----QLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWN-AHKGFCMSTLRTHKDYVKALAYA-KDKELVASAGLDRQIFLWDVNTLTALTASNNTV 159
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_HUMAN (WD repeat-containing protein 48 OS=Homo sapiens GN=WDR48 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.284e-21 Identity = 59/165 (35.76%), Postives = 92/165 (55.76%), Query Frame = 3 Query: 141 AGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGS-CSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 629 A ++ +T R++ +++YV+ + + + G+N L + ++ LFT RD ++ WS+ A+ E H DWVND VL TL+S SSDTT+K WN + G C+ TLR H DYV LA A K+ +VAS GL ++F+WD+ A + S + + Sbjct: 2 AAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNAL-----QLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWN-AHKGFCMSTLRTHKDYVKALAYA-KDKELVASAGLDRQIFLWDVNTLTALTASNNTV 159
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_CHICK (WD repeat-containing protein 48 OS=Gallus gallus GN=WDR48 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.284e-21 Identity = 59/165 (35.76%), Postives = 92/165 (55.76%), Query Frame = 3 Query: 141 AGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGS-CSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 629 A ++ +T R++ +++YV+ + + + G+N L + ++ LFT RD ++ WS+ A+ E H DWVND VL TL+S SSDTT+K WN + G C+ TLR H DYV LA A K+ +VAS GL ++F+WD+ A + S + + Sbjct: 2 AAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNAL-----QLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWN-AHKGFCMSTLRTHKDYVKALAYA-KDKELVASAGLDRQIFLWDVNTLTALTASNNTV 159
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_BOVIN (WD repeat-containing protein 48 OS=Bos taurus GN=WDR48 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.284e-21 Identity = 59/165 (35.76%), Postives = 92/165 (55.76%), Query Frame = 3 Query: 141 AGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGS-CSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 629 A ++ +T R++ +++YV+ + + + G+N L + ++ LFT RD ++ WS+ A+ E H DWVND VL TL+S SSDTT+K WN + G C+ TLR H DYV LA A K+ +VAS GL ++F+WD+ A + S + + Sbjct: 2 AAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNAL-----QLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWN-AHKGFCMSTLRTHKDYVKALAYA-KDKELVASAGLDRQIFLWDVNTLTALTASNNTV 159
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_XENTR (WD repeat-containing protein 48 OS=Xenopus tropicalis GN=wdr48 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.545e-21 Identity = 58/165 (35.15%), Postives = 92/165 (55.76%), Query Frame = 3 Query: 141 AGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGS-CSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 629 A ++ +T R++ +++YV+ + + + G+N L + ++ LFT RD ++ W++ A+ E H DWVND VL TL+S SSDTT+K WN + G C+ TLR H DYV LA A K+ +VAS GL ++F+WD+ A + S + + Sbjct: 2 AAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNAL-----QLDPALNRLFTAGRDSIIRIWNVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWN-AHKGFCMSTLRTHKDYVKALAYA-KDKELVASAGLDRQIFLWDVNTLTALTASNNTV 159
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_DANRE (WD repeat-containing protein 48 OS=Danio rerio GN=wdr48 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 9.545e-21 Identity = 60/174 (34.48%), Postives = 94/174 (54.02%), Query Frame = 3 Query: 114 VVAMHRVGSAGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGS-CSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 629 + +HR +AG R++ +++YV+ + + + G+N L + ++ LFT RD ++ WS+ A+ E H DWVND +L TL+S SSDTT+K WN + G C+ TLR H DYV LA A K+ +VAS GL ++F+WD+ A + S + + Sbjct: 1 MATLHRQNAAG--------RRKVQVSYVIRDEVEKYNRNGVNAL-----QLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIILCCNGKTLISASSDTTVKVWN-AHKGFCMSTLRTHKDYVKALAYA-KDKELVASAGLDRQIFLWDVNTLTALTASNNTV 159
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_DROYA (WD repeat-containing protein 48 homolog OS=Drosophila yakuba GN=GE13034 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.167e-18 Identity = 55/155 (35.48%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 171 RKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 629 RK+ ++++V+ ++++ +H G+N L + +NG L++ RD ++ W+ D + E H DWVND VL L+S S DTT+K WN G C+ TLR H DYV LA A K+ VAS GL +F+WD+ A + S + + Sbjct: 10 RKKMQVSFVIRDAEEKQHRNGVNALQL---DANNGK--LYSAGRDAIIRVWNTRTDSSEKYIQSMEHHNDWVNDIVLCCNGRNLISASCDTTVKVWNAQK-GFCMSTLRTHRDYVQALAYA-KDREQVASAGLDKAIFLWDVNTLTALTASNNTV 157
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_DROSI (WD repeat-containing protein 48 homolog OS=Drosophila simulans GN=GD25924 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.167e-18 Identity = 55/155 (35.48%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 171 RKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 629 RK+ ++++V+ ++++ +H G+N L + +NG L++ RD ++ W+ D + E H DWVND VL L+S S DTT+K WN G C+ TLR H DYV LA A K+ VAS GL +F+WD+ A + S + + Sbjct: 10 RKKMQVSFVIRDAEEKQHRNGVNALQL---DANNGK--LYSAGRDAIIRVWNTRTDSSEKYIQSMEHHNDWVNDIVLCCNGRNLISASCDTTVKVWNAQK-GFCMSTLRTHRDYVQALAYA-KDREQVASAGLDKAIFLWDVNTLTALTASNNTV 157 The following BLAST results are available for this feature:
BLAST of DN617887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617887 ID=DN617887; Name=DN617887; organism=Citrus sinensis; type=EST; length=630bpback to top |