DN617882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617882 vs. ExPASy Swiss-Prot
Match: TM165_RAT (Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.896e-18 Identity = 41/83 (49.40%), Postives = 60/83 (72.29%), Query Frame = -2 Query: 350 LKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQS-FLSP 595 ++A ++TF EWGD+SQL TI LAA E+P+GV +GG +G LCT AVIGG+ +A +IS + V + GG++F+ F + F+SP Sbjct: 237 VQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISP 319
BLAST of DN617882 vs. ExPASy Swiss-Prot
Match: TM165_MOUSE (Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 8.896e-18 Identity = 41/83 (49.40%), Postives = 60/83 (72.29%), Query Frame = -2 Query: 350 LKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQS-FLSP 595 ++A ++TF EWGD+SQL TI LAA E+P+GV +GG +G LCT AVIGG+ +A +IS + V + GG++F+ F + F+SP Sbjct: 237 VQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISP 319
BLAST of DN617882 vs. ExPASy Swiss-Prot
Match: TM165_HUMAN (Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.896e-18 Identity = 41/83 (49.40%), Postives = 60/83 (72.29%), Query Frame = -2 Query: 350 LKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQS-FLSP 595 ++A ++TF EWGD+SQL TI LAA E+P+GV +GG +G LCT AVIGG+ +A +IS + V + GG++F+ F + F+SP Sbjct: 238 VQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISP 320
BLAST of DN617882 vs. ExPASy Swiss-Prot
Match: Y615_SYNY3 (UPF0016 membrane protein sll0615 OS=Synechocystis sp. (strain PCC 6803) GN=sll0615 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.766e-17 Identity = 39/83 (46.99%), Postives = 59/83 (71.08%), Query Frame = -2 Query: 347 LKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQSFLSPV 595 +++F++TF EWGD++Q+ATI LAA N +GV G I+G +C AV+GGK +A +ISEK V L GG+LF +F + S+ + + Sbjct: 123 VESFALTFVAEWGDRTQIATIALAASNNAWGVSAGAILGHTICAVIAVMGGKFVAGRISEKTVTLIGGLLFYLFAVVSWWTKI 205
BLAST of DN617882 vs. ExPASy Swiss-Prot
Match: YD68_SCHPO (UPF0016 membrane protein C17G8.08c OS=Schizosaccharomyces pombe GN=SPAC17G8.08c PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.285e-16 Identity = 39/79 (49.37%), Postives = 55/79 (69.62%), Query Frame = -2 Query: 359 LKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQSF 595 +KAF++TF EWGD+SQ+ATI +AA +N +GV +G +G A CT AVI GK ++++I V GG+LFI FG+ F Sbjct: 204 IKAFALTFVSEWGDRSQIATIAMAASDNVYGVFMGANVGHACCTALAVISGKYISTKIKVHKVMFIGGILFIAFGLVYF 282
BLAST of DN617882 vs. ExPASy Swiss-Prot
Match: YB37_YEAST (UPF0016 membrane protein YBR187W OS=Saccharomyces cerevisiae GN=YBR187W PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.625e-11 Identity = 30/76 (39.47%), Postives = 52/76 (68.42%), Query Frame = -2 Query: 368 LKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGI 595 ++ F + F GE GD+SQ++ I +A D + + V+ G +IG A+C+ AV+GGK LA++IS + + L+ +LF +F + Sbjct: 194 VQIFLMVFLGELGDRSQISIIAMATDSDYWYVIAGAVIGHAICSGLAVVGGKLLATRISIRTITLASSLLFFIFAL 269 The following BLAST results are available for this feature:
BLAST of DN617882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617882 ID=DN617882; Name=DN617882; organism=Citrus sinensis; type=EST; length=596bpback to top |