DN617876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617876 vs. ExPASy Swiss-Prot
Match: BRE_XENTR (BRCA1-A complex subunit BRE OS=Xenopus tropicalis GN=bre PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.939e-15 Identity = 47/105 (44.76%), Postives = 60/105 (57.14%), Query Frame = 1 Query: 211 DRFTLLIPYCLDTIKWDVIYNAEFPHVPPDVIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTM 525 DRF L IPY +T+KWD+I+NA +P +PPD IFG ED +F P S ++LA WN DP LL ++ EL QY YQ R+ E RL FE T+ Sbjct: 54 DRFKLHIPYAGETLKWDIIFNATYPELPPDFIFG-EDAEFLP----------DPSALHNLAEWNPSDPECLLLVVKELVQQYHQYQCSRLSE--SSRLMFEYQTL 145
BLAST of DN617876 vs. ExPASy Swiss-Prot
Match: BRE_SAGOE (BRCA1-A complex subunit BRE OS=Saguinus oedipus GN=BRE PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.939e-15 Identity = 47/106 (44.34%), Postives = 65/106 (61.32%), Query Frame = 1 Query: 211 DRFTLLIPYCLDTIKWDVIYNAEFPHVPPDVIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTML 528 DRF L IPY +T+KWD+I+NA++P +PPD IFG ED +F P D +++N LA+WN +P LL ++ EL QY +Q R+ E RL FE T+L Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALQN-LASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLL 146
BLAST of DN617876 vs. ExPASy Swiss-Prot
Match: BRE_HUMAN (BRCA1-A complex subunit BRE OS=Homo sapiens GN=BRE PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.939e-15 Identity = 47/106 (44.34%), Postives = 65/106 (61.32%), Query Frame = 1 Query: 211 DRFTLLIPYCLDTIKWDVIYNAEFPHVPPDVIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTML 528 DRF L IPY +T+KWD+I+NA++P +PPD IFG ED +F P D +++N LA+WN +P LL ++ EL QY +Q R+ E RL FE T+L Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALQN-LASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLL 146
BLAST of DN617876 vs. ExPASy Swiss-Prot
Match: BRE_XENLA (BRCA1-A complex subunit BRE OS=Xenopus laevis GN=bre PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.839e-15 Identity = 49/120 (40.83%), Postives = 66/120 (55.00%), Query Frame = 1 Query: 211 DRFTLLIPYCLDTIKWDVIYNAEFPHVPPDVIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHTSSG 564 DRF L IPY +T+KWD+I+NA +P +PPD IFG ED +F P S ++L+ WN DP LL ++ EL QY YQ R+ E RL FE T+ + G+ M +G Sbjct: 54 DRFKLHIPYAGETLKWDIIFNASYPELPPDFIFG-EDAEFLP----------DPSALHNLSEWNPSDPECLLLVVKELVQQYHQYQCSRLSE--SSRLMFEYQTLQEEPQYGLNMEIYAG 160
BLAST of DN617876 vs. ExPASy Swiss-Prot
Match: BRE_MESAU (BRCA1-A complex subunit BRE OS=Mesocricetus auratus GN=Bre PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.839e-15 Identity = 46/106 (43.40%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 211 DRFTLLIPYCLDTIKWDVIYNAEFPHVPPDVIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTML 528 DRF L IPY +++KWD+I+NA++P +PPD IFG ED +F P S ++LA+WN DP LL ++ EL QY +Q R+ E RL FE T+L Sbjct: 54 DRFKLHIPYAGESLKWDIIFNAQYPELPPDFIFG-EDAEFLP----------DPSALHNLASWNPSDPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLL 146
BLAST of DN617876 vs. ExPASy Swiss-Prot
Match: BRE_CERAE (BRCA1-A complex subunit BRE OS=Cercopithecus aethiops GN=BRE PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.839e-15 Identity = 47/106 (44.34%), Postives = 65/106 (61.32%), Query Frame = 1 Query: 211 DRFTLLIPYCLDTIKWDVIYNAEFPHVPPDVIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTML 528 DRF L IPY +T+KWD+I+NA++P +PPD IFG ED +F P D +++N LA+WN +P LL ++ EL QY +Q R+ E RL FE T+L Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDVEFLP---------DPSALQN-LASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLL 146
BLAST of DN617876 vs. ExPASy Swiss-Prot
Match: BRE_BOVIN (BRCA1-A complex subunit BRE OS=Bos taurus GN=BRE PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.014e-15 Identity = 46/106 (43.40%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 211 DRFTLLIPYCLDTIKWDVIYNAEFPHVPPDVIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTML 528 DRF L IPY +T+KWD+I+NA++P +PPD IFG ED +F P S ++LA+WN +P LL ++ EL QY +Q R+ E RL FE T+L Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP----------DPSALHNLASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLL 146
BLAST of DN617876 vs. ExPASy Swiss-Prot
Match: BRE_PONAB (BRCA1-A complex subunit BRE OS=Pongo abelii GN=BRE PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.548e-15 Identity = 46/106 (43.40%), Postives = 65/106 (61.32%), Query Frame = 1 Query: 211 DRFTLLIPYCLDTIKWDVIYNAEFPHVPPDVIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTML 528 DRF L +PY +T+KWD+I+NA++P +PPD IFG ED +F P D +++N LA+WN +P LL ++ EL QY +Q R+ E RL FE T+L Sbjct: 54 DRFKLHMPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALQN-LASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLL 146
BLAST of DN617876 vs. ExPASy Swiss-Prot
Match: BRE_RAT (BRCA1-A complex subunit BRE OS=Rattus norvegicus GN=Bre PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.552e-15 Identity = 46/106 (43.40%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 211 DRFTLLIPYCLDTIKWDVIYNAEFPHVPPDVIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTML 528 DRF L IPY +T+KWD+I+NA++P +PPD IFG ED +F P S ++LA+WN +P LL ++ EL QY +Q R+ E RL FE T+L Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP----------DPSALHNLASWNPSNPECLLLVVKELVQQYHQFQCGRLRE--SSRLMFEYQTLL 146
BLAST of DN617876 vs. ExPASy Swiss-Prot
Match: BRE_MOUSE (BRCA1-A complex subunit BRE OS=Mus musculus GN=Bre PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 8.552e-15 Identity = 46/106 (43.40%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 211 DRFTLLIPYCLDTIKWDVIYNAEFPHVPPDVIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTML 528 DRF L IPY +T+KWD+I+NA++P +PPD IFG ED +F P S ++LA+WN +P LL ++ EL QY +Q R+ E RL FE T+L Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP----------DPSALHNLASWNPSNPECLLLVVKELVQQYHQFQCGRLRE--SSRLMFEYQTLL 146 The following BLAST results are available for this feature:
BLAST of DN617876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617876 ID=DN617876; Name=DN617876; organism=Citrus sinensis; type=EST; length=654bpback to top |