DN617867

Overview
NameDN617867
Unique NameDN617867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length526
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig516 contig Csv1_Contig516:81..604. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2C_ARATH (Hydroxyacylglutathione hydrolase cytoplasmic OS=Arabidopsis thaliana GN=GLX2-2 PE=1 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 1.174e-65
Identity = 106/132 (80.30%), Postives = 120/132 (90.91%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSNVK 524
            GNEK+K++VP IKVYGGSLD VKGCT  V+NGDK ++G  +N+L+LHTPCHTKGHISYYV GKEGE+PAVFTGDTLFVAGCGKFFEG+AEQMYQSLCVTL +LP+PTQVYCGHEYTVKNL FALTV P+N K
Sbjct:   62 GNEKIKQLVPDIKVYGGSLDKVKGCTDAVDNGDKLTLGQDINILALHTPCHTKGHISYYVNGKEGENPAVFTGDTLFVAGCGKFFEGTAEQMYQSLCVTLAALPKPTQVYCGHEYTVKNLEFALTVEPNNGK 193          

HSP 2 Score: 37.3502 bits (85), Expect = 1.174e-65
Identity = 17/40 (42.50%), Postives = 22/40 (55.00%), Query Frame = 2
Query:   20 AVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGRERK 139
            AVVDPV+PEK+I +A++              WDHAG   K
Sbjct:   26 AVVDPVDPEKVIASAEKHQAKIKFVLTTHHHWDHAGGNEK 65          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_DANRE (Hydroxyacylglutathione hydrolase, mitochondrial OS=Danio rerio GN=hagh PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 9.610e-43
Identity = 75/131 (57.25%), Postives = 96/131 (73.28%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEG-EDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            GNEK+ +++PG+ VYGG  D V   T +V + + F +G+ +NV  L TPCHT GHI Y+VT +   E PAVFTGDTLFVAGCGKFFEG+A++MY++L   LG LP  T+VYCGHEYT+ NL FA  V P+N
Sbjct:  105 GNEKLVKLMPGLTVYGGD-DRVGALTQKVTHYNTFKVGS-LNVKCLFTPCHTSGHICYFVTKENSTEAPAVFTGDTLFVAGCGKFFEGTADEMYKALIEVLGRLPPETRVYCGHEYTINNLKFARHVEPNN 233          

HSP 2 Score: 41.9726 bits (97), Expect = 9.610e-43
Identity = 17/46 (36.96%), Postives = 26/46 (56.52%), Query Frame = 2
Query:    2 DHSKKLAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGRERK 139
            + +K+ A+VDPVEP+K+++A K+              WDHAG   K
Sbjct:   63 EETKEAAIVDPVEPQKVVDAVKKHGVKLKTVLTTHHHWDHAGGNEK 108          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_XENTR (Hydroxyacylglutathione hydrolase, mitochondrial OS=Xenopus tropicalis GN=hagh PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.356e-41
Identity = 75/131 (57.25%), Postives = 91/131 (69.47%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEG-EDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            GNEK+ +MV G+KVYGG    +   T +V +   F +G+ ++V  L+TPCHT GHI YYVT     E PAVFTGDTLFVAGCGKFFEG+ E+MY +L   LG LP  T+VYCGHEYT+ NL FA  V P N
Sbjct:  115 GNEKLVKMVSGLKVYGGD-SRIGALTQKVSHLTTFQVGS-LHVKCLYTPCHTSGHICYYVTKPNSTEPPAVFTGDTLFVAGCGKFFEGTPEEMYAALIEVLGRLPPETRVYCGHEYTINNLKFARHVEPCN 243          

HSP 2 Score: 41.9726 bits (97), Expect = 1.356e-41
Identity = 17/46 (36.96%), Postives = 26/46 (56.52%), Query Frame = 2
Query:    2 DHSKKLAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGRERK 139
            + SK+ A+VDPV+P+K+++A K+              WDHAG   K
Sbjct:   73 EESKEAAIVDPVQPQKVVDAVKKHGVKLTTVLTTHHHWDHAGGNEK 118          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_BOVIN (Hydroxyacylglutathione hydrolase, mitochondrial OS=Bos taurus GN=HAGH PE=2 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 2.302e-41
Identity = 73/131 (55.73%), Postives = 93/131 (70.99%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEG-EDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            GNEK+ ++ PG+KVYGG  D +   TH+V +     +G+ ++V  L TPCHT GHI Y+VT     E PAVFTGDTLFVAGCGKF+EG+A++MY++L   LG LP  T+VYCGHEYT+ NL FA  V P N
Sbjct:  110 GNEKLVKLEPGLKVYGGD-DRIGALTHKVTHLSTLQVGS-LHVKCLSTPCHTSGHICYFVTKPNSPEPPAVFTGDTLFVAGCGKFYEGTADEMYKALLEVLGRLPADTRVYCGHEYTINNLKFARHVEPDN 238          

HSP 2 Score: 40.4318 bits (93), Expect = 2.302e-41
Identity = 16/46 (34.78%), Postives = 26/46 (56.52%), Query Frame = 2
Query:    2 DHSKKLAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGRERK 139
            + +K+ A+VDPV+P+K++E A++              WDHAG   K
Sbjct:   68 EDTKEAAIVDPVQPQKVVETARKHGVKLTTVLTTHHHWDHAGGNEK 113          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_MOUSE (Hydroxyacylglutathione hydrolase, mitochondrial OS=Mus musculus GN=Hagh PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 5.092e-41
Identity = 72/131 (54.96%), Postives = 93/131 (70.99%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDP-AVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            GNEK+ ++ PG+KVYGG  D +   TH+V +     +G+ ++V  L TPCHT GHI Y+V+     +P AVFTGDTLFVAGCGKF+EG+A++MY++L   LG LP  T+VYCGHEYTV NL FA  V P N
Sbjct:  111 GNEKLVKLEPGLKVYGGD-DRIGALTHKVTHLSTLQVGS-LSVKCLSTPCHTSGHICYFVSKPGSSEPSAVFTGDTLFVAGCGKFYEGTADEMYKALLEVLGRLPPDTKVYCGHEYTVNNLKFARHVEPGN 239          

HSP 2 Score: 41.9726 bits (97), Expect = 5.092e-41
Identity = 18/46 (39.13%), Postives = 27/46 (58.70%), Query Frame = 2
Query:    2 DHSKKLAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGRERK 139
            + +++ A+VDPV+P+K+IEAAK+              WDHAG   K
Sbjct:   69 EDTQEAAIVDPVQPQKVIEAAKKHHVKLTTVLTTHHHWDHAGGNEK 114          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_HUMAN (Hydroxyacylglutathione hydrolase, mitochondrial OS=Homo sapiens GN=HAGH PE=1 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 1.913e-40
Identity = 71/131 (54.20%), Postives = 92/131 (70.23%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEG-EDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            GNEK+ ++  G+KVYGG  D +   TH++ +     +G+ +NV  L TPCHT GHI Y+V+   G E PAVFTGDTLFVAGCGKF+EG+A++M ++L   LG LP  T+VYCGHEYT+ NL FA  V P N
Sbjct:  110 GNEKLVKLESGLKVYGGD-DRIGALTHKITHLSTLQVGS-LNVKCLATPCHTSGHICYFVSKPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNLKFARHVEPGN 238          

HSP 2 Score: 42.743 bits (99), Expect = 1.913e-40
Identity = 17/46 (36.96%), Postives = 27/46 (58.70%), Query Frame = 2
Query:    2 DHSKKLAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGRERK 139
            D +K+ A+VDPV+P+K+++AA++              WDHAG   K
Sbjct:   68 DETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHAGGNEK 113          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_MACFA (Hydroxyacylglutathione hydrolase, mitochondrial OS=Macaca fascicularis GN=HAGH PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 2.492e-40
Identity = 71/131 (54.20%), Postives = 92/131 (70.23%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEG-EDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            GNEK+ ++  G+KVYGG  D +   TH++ +     +G+ +NV  L TPCHT GHI Y+V+   G E PAVFTGDTLFVAGCGKF+EG+A++M ++L   LG LP  T+VYCGHEYT+ NL FA  V P N
Sbjct:  110 GNEKLVKLQSGLKVYGGD-DRIGALTHKITHLSTLQVGS-LNVKCLATPCHTSGHICYFVSRPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNLKFARHVEPGN 238          

HSP 2 Score: 42.3578 bits (98), Expect = 2.492e-40
Identity = 17/46 (36.96%), Postives = 27/46 (58.70%), Query Frame = 2
Query:    2 DHSKKLAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGRERK 139
            D +K+ A+VDPV+P+K+++AA++              WDHAG   K
Sbjct:   68 DETKEAAIVDPVQPQKVLDAARKHGVKLTTVLTTHHHWDHAGGNEK 113          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_CALJA (Hydroxyacylglutathione hydrolase, mitochondrial (Fragment) OS=Callithrix jacchus GN=HAGH PE=2 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 2.495e-40
Identity = 71/131 (54.20%), Postives = 91/131 (69.47%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEG-EDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            GNEK+ ++ PG+KVYGG  D + G TH+  +     +G+ +NV  L TPCHT GHI Y+VT   G + PAVFTGDTLFVAGCGKF+EG+A++M ++L   LG  P  T+VYCGHEYT+ NL FA  V   N
Sbjct:   82 GNEKLVKLEPGLKVYGGD-DRIGGLTHKGTHLSTLQVGS-LNVKCLSTPCHTSGHICYFVTKPGGSQPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRFPPDTRVYCGHEYTINNLKFARHVESGN 210          

HSP 2 Score: 43.1282 bits (100), Expect = 2.495e-40
Identity = 18/46 (39.13%), Postives = 26/46 (56.52%), Query Frame = 2
Query:    2 DHSKKLAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGRERK 139
            D +K+ A+VDPV+P+K++E AK+              WDHAG   K
Sbjct:   40 DETKEAAIVDPVQPQKVVEEAKKHGVMLTTVLTTHHHWDHAGGNEK 85          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_CHICK (Hydroxyacylglutathione hydrolase, mitochondrial OS=Gallus gallus GN=HAGH PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.181e-40
Identity = 74/132 (56.06%), Postives = 91/132 (68.94%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTG-KEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSNV 521
            GNEK+ ++  G++VYGG    V   T +V +     +G+ +NV  L TPCHT GHI YYVT     E PAVFTGDTLFVAGCGKFFEG+ E+MY++L   LGSL   T+VYCGHEYT+ NL FA  V P+NV
Sbjct:  112 GNEKLVKLETGLRVYGGD-SRVGALTQKVSHLTSLKVGS-LNVKCLCTPCHTSGHICYYVTKPNSSEPPAVFTGDTLFVAGCGKFFEGTPEEMYRALIEILGSLDPETRVYCGHEYTINNLKFARHVEPNNV 241          

HSP 2 Score: 40.4318 bits (93), Expect = 7.181e-40
Identity = 16/46 (34.78%), Postives = 26/46 (56.52%), Query Frame = 2
Query:    2 DHSKKLAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGRERK 139
            + +K+ A+VDPV+P+K+++A K+              WDHAG   K
Sbjct:   70 EETKEAAIVDPVQPQKVLDAVKKHGVKLTSVLTTHHHWDHAGGNEK 115          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_RAT (Hydroxyacylglutathione hydrolase, mitochondrial OS=Rattus norvegicus GN=Hagh PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 2.696e-39
Identity = 71/131 (54.20%), Postives = 92/131 (70.23%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDP-AVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            GNEK+ ++ PG+KVYGG  D +   TH+V +     +G+ ++V  L TPCHT GHI Y+V+     +P AVFTGDTLFVAGCGKF+EG+A++MY++L   LG LP  T+V CGHEYTV NL FA  V P N
Sbjct:  111 GNEKLVKLEPGLKVYGGD-DRIGALTHKVTHLSTLEVGS-LSVKCLSTPCHTSGHICYFVSKPGSSEPSAVFTGDTLFVAGCGKFYEGTADEMYKALLEVLGRLPPDTKVICGHEYTVNNLKFARHVEPGN 239          

HSP 2 Score: 39.2762 bits (90), Expect = 2.696e-39
Identity = 17/46 (36.96%), Postives = 25/46 (54.35%), Query Frame = 2
Query:    2 DHSKKLAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGRERK 139
            + +++ AVVDPV+P+K+IE  K+              WDHAG   K
Sbjct:   69 EDTQEAAVVDPVQPQKVIETVKKHRVKLTTVLTTHHHWDHAGGNEK 114          
The following BLAST results are available for this feature:
BLAST of DN617867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GLO2C_ARATH1.174e-6580.30Hydroxyacylglutathione hydrolase cytoplasmic OS=Ar... [more]
GLO2_DANRE9.610e-4357.25Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_XENTR1.356e-4157.25Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_BOVIN2.302e-4155.73Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_MOUSE5.092e-4154.96Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_HUMAN1.913e-4054.20Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_MACFA2.492e-4054.20Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_CALJA2.495e-4054.20Hydroxyacylglutathione hydrolase, mitochondrial (F... [more]
GLO2_CHICK7.181e-4056.06Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_RAT2.696e-3954.20Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01M18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617867 ID=DN617867; Name=DN617867; organism=Citrus sinensis; type=EST; length=526bp
AGACCACTCAAAGAAGCTCGCGGTTGTTGATCCAGTGGAGCCAGAGAAGA
TCATTGAGGCTGCCAAACAACATGGTGTCAATCTCACCACCGTTCTCACT
ACTCATCATCACTGGGACCATGCTGGNAGGGAACGAAAAGATGAAGGAGA
TGGTGCCTGGGATTAAGGTGTATGGTGGCTCACTTGATAATGTAAAGGGG
TGCACTCATCAAGTGGAAAATGGTGATAAGTTCTCAATTGGAGCTCATGT
CAATGTACTGTCTCTTCACACACCTTGCCATACCAAAGGTCACATAAGTT
ATTATGTGACTGGAAAAGAGGGAGAAGACCCAGCTGTTTTCACTGGAGAC
ACACTGTTTGTTGCTGGTTGTGGAAAATTTTTTGAAGGCTCGGCAGAACA
GATGTATCAATCCCTGTGCGTGACATTGGGCTCATTACCTCAGCCAACTC
AAGTTTACTGTGGCCATGAGTACACAGTGAAGAACCTACTATTTGCTCTT
ACTGTCTCACCAAGCAATGTGAAGCT
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