DN617862

Overview
NameDN617862
Unique NameDN617862
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5754 contig Csv1_Contig5754:1..697. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617862 vs. ExPASy Swiss-Prot
Match: PTR2_ARATH (Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1)

HSP 1 Score: 356.681 bits (914), Expect = 6.854e-98
Identity = 173/216 (80.09%), Postives = 188/216 (87.04%), Query Frame = 3
Query:   51 MGSIEEE-RLLLEEGNIENKSSGLYTGDGSVDISGKPVLKQNTGNWRACPFILGTECCERLAYYGIATNLVSYLTHKLHEGNVSAARNVTTWQGTCYLTPLIGAVLADAYWGRYWTIAAFSTIYFIGMCTLTLSASIPALKPAECVGALCPSATPAQYAVFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKRGSFFHWVYFSINIGALIS 695
            MGSIEEE R L+EEG I  +   LY  DGSVD +G P LK+ TGNW+ACPFILG ECCERLAYYGIA NL++YLT KLH+GNVSAA NVTTWQGTCYLTPLIGAVLADAYWGRYWTIA FS IYFIGM  LTLSAS+PALKPAEC+G  CPSATPAQYA+FF GLYLIALGTGGIKPCVSSFGADQFDDTDS ERV++ SFF+W YFSINIGAL+S
Sbjct:    1 MGSIEEEARPLIEEGLILQEVK-LYAEDGSVDFNGNPPLKEKTGNWKACPFILGNECCERLAYYGIAGNLITYLTTKLHQGNVSAATNVTTWQGTCYLTPLIGAVLADAYWGRYWTIACFSGIYFIGMSALTLSASVPALKPAECIGDFCPSATPAQYAMFFGGLYLIALGTGGIKPCVSSFGADQFDDTDSRERVRKASFFNWFYFSINIGALVS 215          
BLAST of DN617862 vs. ExPASy Swiss-Prot
Match: PTR1_ARATH (Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.302e-72
Identity = 127/193 (65.80%), Postives = 149/193 (77.20%), Query Frame = 3
Query:  117 LYTGDGSVDISGKPVLKQNTGNWRACPFILGTECCERLAYYGIATNLVSYLTHKLHEGNVSAARNVTTWQGTCYLTPLIGAVLADAYWGRYWTIAAFSTIYFIGMCTLTLSASIPALKPAECVGALCPSATPAQYAVFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKRGSFFHWVYFSINIGALIS 695
            +YT DG+VDI   P  K+ TGNW+AC FILG ECCERLAYYG+ TNLV+YL  +L++GN +AA NVT W GTCY+TPLIGA +ADAY GRYWTIA F  IY  GM  LTLSAS+P LKP  C    C     +Q AVFF  LY+IALGTGGIKPCVSSFGADQFD+ D NE++K+ SFF+W YFSIN+GALI+
Sbjct:    6 VYTQDGTVDIHKNPANKEKTGNWKACRFILGNECCERLAYYGMGTNLVNYLESRLNQGNATAANNVTNWSGTCYITPLIGAFIADAYLGRYWTIATFVFIYVSGMTLLTLSASVPGLKPGNCNADTC-HPNSSQTAVFFVALYMIALGTGGIKPCVSSFGADQFDENDENEKIKKSSFFNWFYFSINVGALIA 197          
BLAST of DN617862 vs. ExPASy Swiss-Prot
Match: PTR5_ARATH (Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 5.659e-68
Identity = 121/193 (62.69%), Postives = 147/193 (76.17%), Query Frame = 3
Query:  117 LYTGDGSVDISGKPVLKQNTGNWRACPFILGTECCERLAYYGIATNLVSYLTHKLHEGNVSAARNVTTWQGTCYLTPLIGAVLADAYWGRYWTIAAFSTIYFIGMCTLTLSASIPALKPAECVGALCPSATPAQYAVFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKRGSFFHWVYFSINIGALIS 695
            +YT DG++DI  KP  K  TG W+AC FILGTECCERLAYYG++TNL++YL  +++  NVSA+++V+ W GTCY TPLIGA +ADAY GRYWTIA+F  IY  GM  LT+SAS+P L P  C G  C  AT  Q A+ F  LYLIALGTGGIKPCVSSFGADQFDDTD  E+  + SFF+W YF IN+GA+I+
Sbjct:    7 IYTKDGTLDIHKKPANKNKTGTWKACRFILGTECCERLAYYGMSTNLINYLEKQMNMENVSASKSVSNWSGTCYATPLIGAFIADAYLGRYWTIASFVVIYIAGMTLLTISASVPGLTPT-CSGETC-HATAGQTAITFIALYLIALGTGGIKPCVSSFGADQFDDTDEKEKESKSSFFNWFYFVINVGAMIA 197          
BLAST of DN617862 vs. ExPASy Swiss-Prot
Match: PTR3B_ARATH (Peptide transporter PTR3-B OS=Arabidopsis thaliana GN=PTR3-B PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.552e-52
Identity = 98/195 (50.26%), Postives = 132/195 (67.69%), Query Frame = 3
Query:  120 YTGDGSVDISGKPVLKQNTGNWRACPFILGTECCERLAYYGIATNLVSYLTHKLHEGNVSAARNVTTWQGTCYLTPLIGAVLADAYWGRYWTIAAFSTIYFIGMCTLTLSASIPALKPAECVGA---LCPSATPAQYAVFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKRGSFFHWVYFSINIGALIS 695
            YT DG+VD+ G  V +  TG W+AC F++  E  ER+AYYGI++NLV Y+T KLH+G V ++ NVT W GT +LTP++GA +ADA++GRY T    S IY +GM  LTLS S+P LKP +C  A    C  A+  Q AVFF  LY +A+GTGG KP +S+ GADQFD+ D  +++ + SFF+W  FSI  G   +
Sbjct:   10 YTKDGTVDLRGNRVRRSQTGRWKACSFVVVYEVFERMAYYGISSNLVIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVADAHFGRYITFVISSAIYLLGMALLTLSVSLPGLKPPKCSTANVENCEKASVIQLAVFFGALYTLAIGTGGTKPNISTIGADQFDEFDPKDKIHKHSFFNWWMFSIFFGTFFA 204          
BLAST of DN617862 vs. ExPASy Swiss-Prot
Match: PTR3A_ARATH (Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.950e-50
Identity = 97/195 (49.74%), Postives = 126/195 (64.62%), Query Frame = 3
Query:  120 YTGDGSVDISGKPVLKQNTGNWRACPFILGTECCERLAYYGIATNLVSYLTHKLHEGNVSAARNVTTWQGTCYLTPLIGAVLADAYWGRYWTIAAFSTIYFIGMCTLTLSASIPALKPAECVGA---LCPSATPAQYAVFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKRGSFFHWVYFSINIGALIS 695
            YT DG+VD+ G PV +   G W+AC F++  E  ER+AYYGI++NL  Y+T KLH+G V ++ NVT W GT +LTP++GA + DA  GRY T      IYF GM  LTLS +IP +KP EC       C  A+  Q AVFF  LY +A+GTGG KP +S+ GADQFD  D  E+ ++ SFF+W  FSI  G L +
Sbjct:   10 YTKDGTVDLQGNPVRRSIRGRWKACSFVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFSGMMVLTLSVTIPGIKPPECSTTNVENCEKASVLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQKLSFFNWWMFSIFFGTLFA 204          
BLAST of DN617862 vs. ExPASy Swiss-Prot
Match: CHL1_ARATH (Nitrate/chlorate transporter OS=Arabidopsis thaliana GN=CHL1 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.992e-40
Identity = 84/188 (44.68%), Postives = 112/188 (59.57%), Query Frame = 3
Query:  141 DISGKPVLKQNTGNWRACPFILGTECCERLAYYGIATNLVSYLTHKLHEGNVSAARNVTTWQGTCYLTPLIGAVLADAYWGRYWTIAAFSTIYFIGMCTLTLSASIPALKPAEC---VGALCPSATPAQYAVFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKRGSFFHWVYFSINIGALIS 695
            D  G+P  +  TG W +   IL  E  ERL   GI  NLV+YLT  +H GN +AA  VT + GT ++  L+G  +AD + GRY TIA F+ I   G+  LTLS  IP L+P  C     + C  A+  Q  V +  LYL ALGTGG+K  VS FG+DQFD+T+  ER K   FF+  +F IN+G+L++
Sbjct:   17 DFQGRPADRSKTGGWASAAMILCIEAVERLTTLGIGVNLVTYLTGTMHLGNATAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFAAIQATGVSILTLSTIIPGLRPPRCNPTTSSHCEQASGIQLTVLYLALYLTALGTGGVKASVSGFGSDQFDETEPKERSKMTYFFNRFFFCINVGSLLA 204          
BLAST of DN617862 vs. ExPASy Swiss-Prot
Match: PTR2X_ARATH (Probable peptide transporter At1g52190 OS=Arabidopsis thaliana GN=At1g52190 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.036e-29
Identity = 70/183 (38.25%), Postives = 103/183 (56.28%), Query Frame = 3
Query:  165 KQNTGNWRACPFILGTECCERLAYYGIATNLVSYLTHKLHEGNVSAARNVTTWQGTCYLTPLIGAVLADAYWGRYWTIAAFSTIYFIGMCTLTLSASIPALKPAEC----VGALCPSATPAQYAVFFFGLYLIALGTGGIKPCVSSFGADQFDDTDS--NERVKRGSFFHWVYFSINIGALIS 695
            K+  G     PFI+  E  E++A YG+  N++ YL      G       +  W      TPL+GA L+D+Y GR+ TI+  S   F+GM  L L+A +P +KP+ C     G+ C S+T +Q A+ +    LI++G+GGI+PC  +FGADQ D+ ++  NERV   SFF W Y S  +  LI+
Sbjct:   19 KKTKGGIITMPFIIANEAFEKVASYGLLPNMIMYLIRDYRFGVAKGTNVLFMWSAASNFTPLLGAFLSDSYLGRFLTISIASLSSFLGMVLLWLTAMLPQVKPSPCDPTAAGSHCGSSTASQLALLYSAFALISIGSGGIRPCSLAFGADQLDNKENPKNERVLE-SFFGWYYASSAVAVLIA 200          
BLAST of DN617862 vs. ExPASy Swiss-Prot
Match: S15A1_RAT (Solute carrier family 15 member 1 OS=Rattus norvegicus GN=Slc15a1 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 68/166 (40.96%), Postives = 100/166 (60.24%), Query Frame = 3
Query:  198 FILGTECCERLAYYGIATNLVSYLTHKLHEGNVSAARNVTTWQGTCYLTPLIGAVLADAYWGRYWTIAAFSTIYFIGMCTLTLSASIPALKPAECVGALCPSATPAQYAVFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKRGSFFHWVYFSINIGALIS 695
            FI+  E CER +YYG+   LV Y  + L   +  +     T+   CYLTP++GA++AD++ G++ TI + S +Y IG   +++S SI  L   +  G+  P+  P   A+   GL LIALGTGGIKPCVS+FG DQF++    +  +R  FF   Y +IN G+L+S
Sbjct:   18 FIVVNEFCERFSYYGMRALLVLYFRNFLGWDDDLSTAIYHTFVALCYLTPILGALIADSWLGKFKTIVSLSIVYTIGQAVISVS-SINDLTDHDHDGS--PNNLPLHVALSMIGLALIALGTGGIKPCVSAFGGDQFEE---GQEKQRNRFFSIFYLAINAGSLLS 177          
BLAST of DN617862 vs. ExPASy Swiss-Prot
Match: S15A1_MOUSE (Solute carrier family 15 member 1 OS=Mus musculus GN=Slc15a1 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.142e-26
Identity = 68/166 (40.96%), Postives = 100/166 (60.24%), Query Frame = 3
Query:  198 FILGTECCERLAYYGIATNLVSYLTHKLHEGNVSAARNVTTWQGTCYLTPLIGAVLADAYWGRYWTIAAFSTIYFIGMCTLTLSASIPALKPAECVGALCPSATPAQYAVFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKRGSFFHWVYFSINIGALIS 695
            FI+  E CER +YYG+   LV Y  + L   +  +     T+   CYLTP++GA++AD++ G++ TI + S +Y IG   +++S SI  L   +  G+  P + P   A+   GL LIALGTGGIKPCVS+FG DQF++    +  +R  FF   Y +IN G+L+S
Sbjct:   18 FIVVNEFCERFSYYGMRALLVLYFRNFLGWDDNLSTAIYHTFVALCYLTPILGALIADSWLGKFKTIVSLSIVYTIGQAVISVS-SINDLTDHDHNGS--PDSLPVHVALSMVGLALIALGTGGIKPCVSAFGGDQFEE---GQEKQRNRFFSIFYLAINGGSLLS 177          
BLAST of DN617862 vs. ExPASy Swiss-Prot
Match: S15A1_RABIT (Solute carrier family 15 member 1 OS=Oryctolagus cuniculus GN=SLC15A1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.103e-26
Identity = 68/166 (40.96%), Postives = 96/166 (57.83%), Query Frame = 3
Query:  198 FILGTECCERLAYYGIATNLVSYLTHKLHEGNVSAARNVTTWQGTCYLTPLIGAVLADAYWGRYWTIAAFSTIYFIGMCTLTLSASIPALKPAECVGALCPSATPAQYAVFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKRGSFFHWVYFSINIGALIS 695
            FI+  E CER +YYG+   L+ Y  + +   +  +     T+   CYLTP++GA++ADA+ G++ TI   S +Y IG    +LS S+  L      G   P + P   AV   GL LIALGTGGIKPCVS+FG DQF++    +  +R  FF   Y +IN G+L+S
Sbjct:   18 FIVVNEFCERFSYYGMRALLILYFRNFIGWDDNLSTVIYHTFVALCYLTPILGALIADAWLGKFKTIVWLSIVYTIGQAVTSLS-SVNELTDNNHDGT--PDSLPVHVAVCMIGLLLIALGTGGIKPCVSAFGGDQFEE---GQEKQRNRFFSIFYLAINAGSLLS 177          
The following BLAST results are available for this feature:
BLAST of DN617862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
PTR2_ARATH6.854e-9880.09Peptide transporter PTR2 OS=Arabidopsis thaliana G... [more]
PTR1_ARATH1.302e-7265.80Peptide transporter PTR1 OS=Arabidopsis thaliana G... [more]
PTR5_ARATH5.659e-6862.69Peptide transporter PTR5 OS=Arabidopsis thaliana G... [more]
PTR3B_ARATH2.552e-5250.26Peptide transporter PTR3-B OS=Arabidopsis thaliana... [more]
PTR3A_ARATH6.950e-5049.74Peptide transporter PTR3-A OS=Arabidopsis thaliana... [more]
CHL1_ARATH4.992e-4044.68Nitrate/chlorate transporter OS=Arabidopsis thalia... [more]
PTR2X_ARATH3.036e-2938.25Probable peptide transporter At1g52190 OS=Arabidop... [more]
S15A1_RAT2.405e-2640.96Solute carrier family 15 member 1 OS=Rattus norveg... [more]
S15A1_MOUSE3.142e-2640.96Solute carrier family 15 member 1 OS=Mus musculus ... [more]
S15A1_RABIT4.103e-2640.96Solute carrier family 15 member 1 OS=Oryctolagus c... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01M15_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617862 ID=DN617862; Name=DN617862; organism=Citrus sinensis; type=EST; length=697bp
CTCTAACTTGCTTCGATCTTTCGTATCCTGAACAGATAAAATTACAGATC
ATGGGATCTATCGAGGAAGAAAGACTGCTCTTGGAAGAAGGAAACATTGA
GAATAAAAGCAGTGGACTGTACACAGGAGATGGCTCTGTAGACATTAGTG
GGAAGCCTGTTCTGAAGCAGAACACTGGAAATTGGAGAGCATGCCCCTTC
ATTTTGGGTACTGAGTGTTGTGAACGCTTGGCCTACTATGGAATCGCAAC
TAATCTTGTTTCTTATCTTACCCACAAACTACACGAAGGAAATGTGTCTG
CTGCAAGAAATGTTACCACCTGGCAAGGCACTTGCTATCTTACACCTCTT
ATTGGAGCTGTCTTAGCTGATGCTTACTGGGGAAGATATTGGACAATTGC
TGCTTTCTCCACAATTTACTTCATTGGAATGTGCACATTGACTCTCTCAG
CCTCAATTCCTGCTCTAAAGCCGGCTGAATGTGTGGGTGCTTTATGCCCT
TCGGCTACTCCAGCTCAGTATGCTGTATTCTTCTTTGGGCTTTATCTGAT
TGCGCTAGGGACTGGTGGGATTAAACCATGTGTTTCATCCTTCGGGGCAG
ATCAGTTTGATGATACTGATTCCAACGAAAGAGTAAAGAGGGGATCCTTC
TTTCACTGGGTTTATTTTTCTATCAACATTGGTGCCCTGATATCTAG
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