DN617831

Overview
NameDN617831
Unique NameDN617831
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length600
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5806 contig Csv1_Contig5806:24..623. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN617831 vs. ExPASy Swiss-Prot
Match: B2_DAUCA (B2 protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.577e-38
Identity = 74/80 (92.50%), Postives = 77/80 (96.25%), Query Frame = -3 
Query:  359 HGIFEAASLGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDSFRPILHHYDGPKFRLELNVPEAISLLDIFEE 598
            HG+FEAAS GGTNIDPTAWEDKK  GESRFPAQVRV+TRKICEPLEEDSFRPILHHYDGPKFRLELN+PEAISLLDIFEE
Sbjct:  125 HGVFEAASFGGTNIDPTAWEDKKNQGESRFPAQVRVMTRKICEPLEEDSFRPILHHYDGPKFRLELNIPEAISLLDIFEE 204
The following BLAST results are available for this feature:
BLAST of DN617831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
B2_DAUCA1.577e-3892.50B2 protein OS=Daucus carota PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01L23_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617831 ID=DN617831; Name=DN617831; organism=Citrus sinensis; type=EST; length=600bp
TTTTTTTTTTTTTTTTTATGCAAATAAAAACCGGTATTATACCAGAACTT
TAGATAAAGTCTTTATAATTTGCTCTTATTTATGTATAAGCTAAACAAAA
GAACAAAAAGGACAAACACCCAGCAACAGCCTCCTCACAAAATGTTTACA
TCAAGGACGCTGTGCATATTCAGCTCTCATACTTCCCCTCACATACTCTC
TCTAAACTATCAATATAATGAAGGCCACAAACTCATAAATTCTTTCCCTA
ATTGTTTCATCAAACCACTTTTATGCTGTGTAACTTCACTAACTGGTACT
TGTATCGGTAAGCTTTTGTTTCGTATGGTCGTATTGCAGCAATTGCTCAA
GAGTCTTGTTCTTCAAATATGTCCAAGAGAGAAATTGCCTCAGGCACATT
TAGTTCAAGGCGGAACTTGGGGCCATCATAGTGATGGAGAATTGGCCTGA
AGGAATCCTCTTCAAGCGGTTCACAGATTTTCCGTGTAACAACCCGGACC
TGAGCTGGGAATCGTGATTCGCCAGGGCATTTCTTGTCTTCCCAGGCTGT
AGGATCAATATTTGTACCTCCCAAGCTAGCAGCCTCAAAAATTCCATGCA
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