DN617825

Overview
NameDN617825
Unique NameDN617825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length621
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7471 contig Csv1_Contig7471:12..632. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 1.768e-88
Identity = 146/188 (77.66%), Postives = 164/188 (87.23%), Query Frame = 2
Query:   56 APEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            APE  HP+ AFGWAARDTSG LSP  FSRRATGE+DVTFKV +CGICHSDLH IKNEWGNA+YP +PGHEIVGVVTEVG+KV  FKVGDKVGVGCMVGSCRSC+SC   LENYCPK+I+TY S Y+DGT+TYGGYSD MV +EHF VRIP+   LDATAPLLCAG+TVYSPL+ + LDKPG+H+GVVG
Sbjct:    5 APENVHPQKAFGWAARDTSGTLSPLKFSRRATGEQDVTFKVLYCGICHSDLHYIKNEWGNAVYPAIPGHEIVGVVTEVGNKVQNFKVGDKVGVGCMVGSCRSCESCENHLENYCPKMILTYGSTYYDGTLTYGGYSDIMVVEEHFAVRIPDNMALDATAPLLCAGVTVYSPLKHFELDKPGLHIGVVG 192          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 1.497e-87
Identity = 146/188 (77.66%), Postives = 165/188 (87.77%), Query Frame = 2
Query:   56 APEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            A EQEH K A GWAARD+SGVLSPF+F RR TGEKDVTFKV +CGICHSDLH++KNEWG + YP+VPGHEIVG VTEVGSKV KFKVGD+VGVGC+VGSCRSC++C   LENYCPK I+TY +KY+DG+ TYGGYSD MVADEHF+VRIP+  PLD  APLLCAGIT YSPLR++GLDKPGMHVGVVG
Sbjct:    2 AIEQEHRKKASGWAARDSSGVLSPFNFYRRETGEKDVTFKVLYCGICHSDLHMVKNEWGFSTYPLVPGHEIVGEVTEVGSKVQKFKVGDRVGVGCIVGSCRSCENCTDHLENYCPKQILTYGAKYYDGSTTYGGYSDIMVADEHFIVRIPDNLPLDGAAPLLCAGITTYSPLRYFGLDKPGMHVGVVG 189          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.357e-80
Identity = 135/191 (70.68%), Postives = 156/191 (81.68%), Query Frame = 2
Query:   47 MGQAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            M ++PE EHP  A GWAA D SG  SPF+FSRRATGE+DV F+V +CG+CHSDLH++KNEWG   YPIVPGHEIVG+VTEVGSKV K K+GDKVGVG +VGSCR CD C+ DLENYC K I+TY + Y DGTI  GGYSD MVADEHF++R PE  PLDA APLLCAGIT YSPL+++GLDKPG+ VGV G
Sbjct:    1 MAKSPETEHPVKALGWAATDNSGTFSPFNFSRRATGERDVQFRVLYCGVCHSDLHMVKNEWGVTHYPIVPGHEIVGIVTEVGSKVEKVKIGDKVGVGVLVGSCRQCDQCSNDLENYCYKQILTYGAPYLDGTIARGGYSDIMVADEHFIIRWPENFPLDAGAPLLCAGITTYSPLKYFGLDKPGLRVGVNG 191          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 3.342e-79
Identity = 133/181 (73.48%), Postives = 153/181 (84.53%), Query Frame = 2
Query:   77 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            K AFG AA+D SGVLSPF F+RR TGEKDV FKV  CGICHSDLH++KNEWG + YP+VPGHEIVGVVTEVG+KV+KFK G+KVGVGC+V SC SCDSC   +ENYCPK I TY   Y+D TITYGGYSD MV +E FV+RIP+  PLDA APLLCAGITVYSP++++GLDKPGMH+GVVG
Sbjct:    7 KEAFGLAAKDNSGVLSPFSFTRRETGEKDVRFKVLFCGICHSDLHMVKNEWGMSTYPLVPGHEIVGVVTEVGAKVTKFKTGEKVGVGCLVSSCGSCDSCTEGMENYCPKSIQTYGFPYYDNTITYGGYSDHMVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKPGMHIGVVG 187          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 9.723e-79
Identity = 134/191 (70.16%), Postives = 155/191 (81.15%), Query Frame = 2
Query:   47 MGQAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            M ++ E EHP  AFGWAARDT+G+LSPF FSRRATGEKDV  KV  CG+CHSD H+I N WG   YPIVPGHEIVGVVTEVGSKV K KVGD VG+GC+VGSCRSC+SC  + E++C   I TY S Y DGT+T+GGYSDTMVADEHF++R P+  PLD+ APLLCAGIT YSPL++YGLDKPG  +GVVG
Sbjct:    1 MAKSSEIEHPVKAFGWAARDTTGLLSPFKFSRRATGEKDVRLKVLFCGVCHSDHHMIHNNWGFTTYPIVPGHEIVGVVTEVGSKVEKVKVGDNVGIGCLVGSCRSCESCCDNRESHCENTIDTYGSIYFDGTMTHGGYSDTMVADEHFILRWPKNLPLDSGAPLLCAGITTYSPLKYYGLDKPGTKIGVVG 191          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 276.559 bits (706), Expect = 7.211e-74
Identity = 127/181 (70.17%), Postives = 147/181 (81.22%), Query Frame = 2
Query:   77 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            K AFG AA+D SG+LSPF FSRRATGEKDV FKV  CGICH+DL + KNEWG   YP+VPGHEIVGVVTEVG+KV KF  GDKVGVG M GSCRSCDSC    ENYCPK+I+T  +K  D T+T+GGYSD MV  E F++RIP+  PLD  APLLCAG+TVYSP++++GLDKPGMH+GVVG
Sbjct:    7 KEAFGLAAKDESGILSPFSFSRRATGEKDVRFKVLFCGICHTDLSMAKNEWGLTTYPLVPGHEIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKMILTSGAKNFDDTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGLDKPGMHIGVVG 187          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 7.972e-73
Identity = 126/187 (67.38%), Postives = 153/187 (81.82%), Query Frame = 2
Query:   62 EQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDAT-APLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            E EHP+ AFGWAARD+SG+LSPF+FSRR  GE+DV  +V +CGICH+DLH+ KN++GN+IYP VPGHE++G+V EVGSKV K+KVGDKVGVG  V SCRSC +C  +LENYCPK I+T   K+ DGT TYGGYSD+MV DEHFV RIPEG PLD   +  LC G + +SPL++YGLDKPG+HVGVVG
Sbjct:    7 EFEHPRKAFGWAARDSSGLLSPFNFSRRDIGEEDVALEVLYCGICHTDLHMAKNDFGNSIYPYVPGHEVIGIVAEVGSKVEKYKVGDKVGVGYFVESCRSCQNCIDNLENYCPKHILTQGDKHIDGTTTYGGYSDSMVVDEHFVTRIPEGLPLDGCGSSSLCWGYS-HSPLKYYGLDKPGLHVGVVG 192          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 5.168e-72
Identity = 118/191 (61.78%), Postives = 147/191 (76.96%), Query Frame = 2
Query:   47 MGQAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            M ++PE EHP   FGW ARD SGVLSPFHFSRR  GE DVT K+  CG+CH+DLH IKN+WG + YP+VPGHEIVG+ T+VG  V+KFK GD+VGVG + GSC+SC+SC  DLENYCP++  TY +   DGT  YGGYS+ +V D+ FV+R PE  P D+ APLLCAGITVYSP+++YG+ + G H+GV G
Sbjct:    1 MAKSPETEHPNKVFGWGARDKSGVLSPFHFSRRDNGENDVTVKILFCGVCHTDLHTIKNDWGYSYYPVVPGHEIVGIATKVGKNVTKFKEGDRVGVGVISGSCQSCESCDQDLENYCPQMSFTYNAIGSDGTKNYGGYSENIVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGMTEAGKHLGVAG 191          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 2.565e-71
Identity = 120/191 (62.83%), Postives = 149/191 (78.01%), Query Frame = 2
Query:   47 MGQAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            M ++PE E P  AFGWAARDTSG LSPFHFSRR  G+ DV+ K+ +CG+CHSDLH +KN+WG   YP+VPGHEIVGVVT+VG  V KF+VGD VGVG +V SC++C++C  DLE YCPK + TY S Y  GT TYGGYSD +V  + +VV+ P+  PLDA APLLCAGITVYSP+++YG+ +PG H+GV G
Sbjct:    1 MAKSPETELPLKAFGWAARDTSGTLSPFHFSRRENGDDDVSVKILYCGVCHSDLHTLKNDWGFTTYPVVPGHEIVGVVTKVGINVKKFRVGDNVGVGVIVESCQTCENCNQDLEQYCPKPVFTYNSPY-KGTRTYGGYSDFVVVHQRYVVQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAG 190          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 9.746e-71
Identity = 119/186 (63.98%), Postives = 148/186 (79.57%), Query Frame = 2
Query:   62 EQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            E+E    AFGWAARD+SG LSPF FSRR TGE++V  KV +CGICHSDLH +KNEW ++IYP+VPGHEI+G V+E+G+KVSKF +GDKVGVGC+V SCR+C+SC  D ENYC K I TY   +HDGTI YGGYSD +V DE + V+IP   PL + APLLCAGI++YSP++++GL  P  HVG+VG
Sbjct:    7 EKEQSVEAFGWAARDSSGHLSPFVFSRRKTGEEEVRVKVLYCGICHSDLHCLKNEWHSSIYPLVPGHEIIGEVSEIGNKVSKFNLGDKVGVGCIVDSCRTCESCREDQENYCTKAIATYNGVHHDGTINYGGYSDHIVVDERYAVKIPHTLPLVSAAPLLCAGISMYSPMKYFGLTGPDKHVGIVG 192          
The following BLAST results are available for this feature:
BLAST of DN617825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
MTDH_MESCR1.768e-8877.66Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
MTDH_FRAAN1.497e-8777.66Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
GEDH1_OCIBA1.357e-8070.68Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
CADH8_ARATH3.342e-7973.48Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
MTDH_APIGR9.723e-7970.16Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]
CADH7_ARATH7.211e-7470.17Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
MTDH3_STYHU7.972e-7367.38Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
CADH9_ARATH5.168e-7261.78Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
MTDH_MEDSA2.565e-7162.83Probable mannitol dehydrogenase OS=Medicago sativa... [more]
CADH6_ARATH9.746e-7163.98Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617825 ID=DN617825; Name=DN617825; organism=Citrus sinensis; type=EST; length=621bp
GTCAAACTAAGCCAACAAGCACCAATATCATTAAATTCATTCTGAAATGG
GGCAAGCACCGGAGCAAGAGCACCCTAAGAACGCCTTTGGATGGGCTGCC
AGGGACACTTCTGGCGTTCTCTCCCCCTTTCACTTCTCCAGAAGAGCAAC
GGGAGAGAAGGATGTGACATTCAAAGTAACTCACTGTGGGATATGCCATT
CAGATCTTCACTTGATCAAAAATGAATGGGGCAATGCCATTTACCCAATC
GTCCCCGGACATGAGATTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGT
GAGTAAATTCAAAGTCGGAGACAAAGTGGGAGTAGGATGCATGGTGGGAT
CATGCCGCTCTTGTGATAGCTGCGCCATTGATCTTGAGAACTACTGCCCC
AAAGTTATAATGACCTATGCCAGCAAGTACCATGATGGAACCATCACATA
CGGAGGCTACTCTGACACTATGGTTGCCGATGAGCACTTTGTGGTCCGTA
TTCCTGAAGGCGCACCACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGT
ATCACAGTCTACAGTCCGTTGAGATTCTATGGACTCGACAAGCCTGGTAT
GCATGTGGGTGTTGTCGGCTT
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