DN617824

Overview
NameDN617824
Unique NameDN617824
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length575
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:873..1448. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617824 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.095e-46
Identity = 87/111 (78.38%), Postives = 102/111 (91.89%), Query Frame = -2
Query:  242 DGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMKS 574
            DGIIDTVSA HPL+PL+GLLKSQGK++++G P+KPLELP FPLL GRKI+ GS IGG+KETQEMIDFAAKH+I++DIEV+P DYVNTAMERL K DVRYRFVIDVANT+K+
Sbjct:  250 DGIIDTVSAAHPLLPLLGLLKSQGKMIMVGVPDKPLELPVFPLLQGRKILAGSCIGGMKETQEMIDFAAKHDIKSDIEVVPMDYVNTAMERLLKGDVRYRFVIDVANTLKA 360          
BLAST of DN617824 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 2.440e-46
Identity = 88/113 (77.88%), Postives = 103/113 (91.15%), Query Frame = -2
Query:  236 DGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMKSTP 574
            DGIIDTVSA HPL+PL+GLLK++GKLV++GAP +PLELP FPL+ GRK+V GS++GG+KETQEM+D A KHNI ADIE+I ADYVNTAMERLAKADV+YRFVIDVANTMK TP
Sbjct:  245 DGIIDTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRKMVVGSMVGGIKETQEMVDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVANTMKPTP 357          
BLAST of DN617824 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.187e-46
Identity = 90/110 (81.82%), Postives = 99/110 (90.00%), Query Frame = -2
Query:  245 DGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMK 574
            DGIIDTVSA HPL+PLIGLL S GKLV++GAPEKPLELP FPLL GRK+V GS IGG+KETQEMIDFAA+HNI ADIEVIP DY+NTAMERL KADVRYRFVID+ NT+K
Sbjct:  247 DGIIDTVSAQHPLLPLIGLLNSHGKLVMVGAPEKPLELPVFPLLMGRKMVAGSGIGGMKETQEMIDFAARHNITADIEVIPIDYLNTAMERLVKADVRYRFVIDIGNTLK 356          
BLAST of DN617824 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.582e-45
Identity = 87/110 (79.09%), Postives = 101/110 (91.82%), Query Frame = -2
Query:  242 GIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMKS 571
            GIIDTVSA+HP++PL+GLLK  GKLV++GAPEKPLELP FPLL GRK++ GS IGGLKETQEM+DFAA+HNI AD+EVIP DYVNTAMERL K+DVRYRFVIDVANT+K+
Sbjct:  227 GIIDTVSALHPVVPLLGLLKVNGKLVMVGAPEKPLELPVFPLLMGRKVLAGSNIGGLKETQEMLDFAAQHNITADVEVIPVDYVNTAMERLVKSDVRYRFVIDVANTIKT 336          
BLAST of DN617824 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.025e-44
Identity = 86/112 (76.79%), Postives = 101/112 (90.18%), Query Frame = -2
Query:  239 DGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMKST 574
            DGIIDTVSA H ++PLIGLLKS GKLVL+GA EKPLELP FPL+ GRK+VGG+L+GGLKETQEMIDF+ KHN++ +IEV+P DYVN AM+RLAKADV+YRFVIDVANT+K T
Sbjct:  251 DGIIDTVSADHSIVPLIGLLKSHGKLVLIGAIEKPLELPPFPLILGRKLVGGTLVGGLKETQEMIDFSPKHNVKPEIEVVPMDYVNIAMQRLAKADVKYRFVIDVANTLKPT 362          
BLAST of DN617824 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 8.679e-44
Identity = 87/113 (76.99%), Postives = 98/113 (86.73%), Query Frame = -2
Query:  236 DGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMKSTP 574
            DGIIDTVSA H L+PL+GLLK +GKLV++GAPEKPLELP  PL+  RK+V GS+IGG+KETQEMID A KHNI ADIE+I ADYVNTAMERL KADVRYRFVIDVANT+K  P
Sbjct:  245 DGIIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQEMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANTLKPNP 357          
BLAST of DN617824 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.253e-42
Identity = 82/111 (73.87%), Postives = 95/111 (85.59%), Query Frame = -2
Query:  242 DGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMKS 574
            DGIIDTV   HPL PL  LLK  GKLV++GAPEKP ELP F LL GRK++GG++ GG+KETQEM+DFAAKHNI AD+EVIP DYVNTAMERL K+DVRYRFVID+ANTM++
Sbjct:  249 DGIIDTVPVNHPLAPLFDLLKPNGKLVMVGAPEKPFELPVFSLLKGRKLLGGTINGGIKETQEMLDFAAKHNITADVEVIPMDYVNTAMERLVKSDVRYRFVIDIANTMRT 359          
BLAST of DN617824 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 8.981e-41
Identity = 81/109 (74.31%), Postives = 94/109 (86.24%), Query Frame = -2
Query:  248 DGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTM 574
            D IIDT+SAVH L PL+GLLK  GKL+ LG PEKPLELP FPL+ GRK+VGGS +GG+KETQEM+DF AKHNI ADIE+I  D +NTAMERLAK+DVRYRFVIDVAN++
Sbjct:  249 DYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGGSDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANSL 357          
BLAST of DN617824 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 7.603e-40
Identity = 76/110 (69.09%), Postives = 95/110 (86.36%), Query Frame = -2
Query:  245 DGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMK 574
            DGIIDTVSA HP++PL+ LLK  GKL+++G P+KPL+LP FPL+ GR+ + GS IGGLKETQEMIDFAAK+NI AD+EVIP DY+NTAM+RL K+DV+YRFVIDV  ++K
Sbjct:  249 DGIIDTVSAPHPIVPLLSLLKPHGKLIVVGLPDKPLQLPVFPLIQGRRTIAGSGIGGLKETQEMIDFAAKNNIVADVEVIPIDYINTAMDRLLKSDVKYRFVIDVEKSLK 358          
BLAST of DN617824 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.694e-39
Identity = 79/112 (70.54%), Postives = 95/112 (84.82%), Query Frame = -2
Query:  239 DGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMKST 574
            DGIIDTVSA H + PLIGLLKS GKLVLLGA EKP ++ AF L+ GRK + GS IGG++ETQEMIDFAA+H I+A+IE+I  DYVNTAM+RLAK DVRYRFVID++NT+ +T
Sbjct:  250 DGIIDTVSASHSISPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRKSIAGSGIGGMQETQEMIDFAAEHGIKAEIEIISMDYVNTAMDRLAKGDVRYRFVIDISNTLAAT 361          
The following BLAST results are available for this feature:
BLAST of DN617824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
MTDH_MESCR1.095e-4678.38Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
CADH7_ARATH2.440e-4677.88Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
MTDH_FRAAN3.187e-4681.82Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
MTDH_PETCR1.582e-4579.09Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
MTDH3_STYHU1.025e-4476.79Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
CADH8_ARATH8.679e-4476.99Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
MTDH_APIGR1.253e-4273.87Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]
CADH9_ARATH8.981e-4174.31Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
GEDH1_OCIBA7.603e-4069.09Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
CADH6_ARATH1.694e-3970.54Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L20_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617824 ID=DN617824; Name=DN617824; organism=Citrus sinensis; type=EST; length=575bp
CTTTTTAATCAAAACCTGAATAATTAATTTCAGTAAAAACTAACATATAG
CTCGCTATTACATAAATTTGTCACACAGATGGAATATATGTCACGAAATT
ATTATTCTTAAAAAGTAAAAACAGTTTTGAAATCACAACAAAAGACTAAC
ATAATCTAAAACTTAGACGATGTTGTGACTCAACAATAAACGCACATTCC
TCGTTTTAAGCGCAACTCAAAAGGGAGAAAATTTAAGGAGTGGACTTCAT
TGTGTTTGCAACGTCGATGACAAAGCGATATCTAACATCGGCTTTAGCAA
GGCGCTCCATGGCTGTGTTCACATAGTCGGCCGGTATGACCTCAATATCA
GCTCTGATGTTGTGTTTTGCTGCAAAATCAATCATCTCTTGAGTCTCCTT
CAACCCCCCAATGAGACTGCCACCAACTATCTTCCTCCCCGTGAGCAGGG
GGAAAGCTGGTAGCTCTAGTGGCTTCTCGGGTGCACCAAGAAGTACAAGC
TTTCCTTGAGATTTCAACAGTCCAATCAACGGCATTAGCGGGTGAACTGC
AGATACTGTATCGATGATACCATCC
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