DN617809

Overview
NameDN617809
Unique NameDN617809
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12382 contig Csv1_Contig12382:868..1462. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617809 vs. ExPASy Swiss-Prot
Match: EF1G_PRUAV (Elongation factor 1-gamma OS=Prunus avium PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.180e-78
Identity = 132/149 (88.59%), Postives = 142/149 (95.30%), Query Frame = -1
Query:  149 MILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 595
            M+LDDWKRLYSNTK+NFREVAIKGFWDMYDPEGYSLWFC+YKYNDENTVSFVTLNKV GFLQRMDLARKYAFGKML+IG+EPP+KVKGLWLFRG EIP FVM+ECYDMELY+W K D+SDE QKERVNQ+IED EPFEGEALLDAKCFK
Sbjct:  274 MVLDDWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCEYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPPFVMEECYDMELYNWTKVDLSDENQKERVNQVIEDQEPFEGEALLDAKCFK 422          
BLAST of DN617809 vs. ExPASy Swiss-Prot
Match: EF1G1_ORYSJ (Elongation factor 1-gamma 1 OS=Oryza sativa subsp. japonica GN=Os02g0220600 PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 4.485e-78
Identity = 133/149 (89.26%), Postives = 141/149 (94.63%), Query Frame = -1
Query:  149 MILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 595
            MILD+WKRLYSNTK+NFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVT+NKV GFLQRMDL RKYAFGKML+IG+EPP+KVKGLWLFRGPEIPKFVMDE YDMELY+W K DISDE QKERV+ MIED EPFEGEALLDAKCFK
Sbjct:  270 MILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVIGSEPPFKVKGLWLFRGPEIPKFVMDEVYDMELYEWTKVDISDEAQKERVSAMIEDLEPFEGEALLDAKCFK 418          
BLAST of DN617809 vs. ExPASy Swiss-Prot
Match: EF1G2_ORYSJ (Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica GN=Os02g0220500 PE=2 SV=2)

HSP 1 Score: 289.271 bits (739), Expect = 9.991e-78
Identity = 132/149 (88.59%), Postives = 141/149 (94.63%), Query Frame = -1
Query:  149 MILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 595
            MILD+WKRLYSNTK+NFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVT+NKV GFLQRMDL RKYAFGKML+IG+EPP+KVKGLWLFRGPEIPKFVMDE YDMELY+W K DISDE QKERV+ MIED EPFEGE+LLDAKCFK
Sbjct:  270 MILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVIGSEPPFKVKGLWLFRGPEIPKFVMDEVYDMELYEWTKVDISDEAQKERVSAMIEDLEPFEGESLLDAKCFK 418          
BLAST of DN617809 vs. ExPASy Swiss-Prot
Match: EF1G2_ARATH (Probable elongation factor 1-gamma 2 OS=Arabidopsis thaliana GN=At1g57720 PE=2 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 1.305e-77
Identity = 133/149 (89.26%), Postives = 140/149 (93.96%), Query Frame = -1
Query:  149 MILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 595
            M+LDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDEN VSFVTLNKV GFLQRMDLARKY+FGKMLI G+E P+KVKGLWLFRGPEIPKF+MDE YDMELY+W K DISDE QKERV+QMIED EPFEGEALLDAKCFK
Sbjct:  265 MVLDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENMVSFVTLNKVGGFLQRMDLARKYSFGKMLICGSEGPFKVKGLWLFRGPEIPKFIMDEVYDMELYEWTKVDISDEAQKERVSQMIEDAEPFEGEALLDAKCFK 413          
BLAST of DN617809 vs. ExPASy Swiss-Prot
Match: EF1G1_ARATH (Probable elongation factor 1-gamma 1 OS=Arabidopsis thaliana GN=At1g09640 PE=2 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 1.305e-77
Identity = 133/149 (89.26%), Postives = 140/149 (93.96%), Query Frame = -1
Query:  149 MILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 595
            M+LDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDEN VSFVTLNKV GFLQRMDLARKY+FGKMLI G+E P+KVKGLWLFRGPEIPKF+MDE YDMELY+W K DISDE QKERV+QMIED EPFEGEALLDAKCFK
Sbjct:  266 MVLDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENMVSFVTLNKVGGFLQRMDLARKYSFGKMLICGSEGPFKVKGLWLFRGPEIPKFIMDEVYDMELYEWTKVDISDEAQKERVSQMIEDAEPFEGEALLDAKCFK 414          
BLAST of DN617809 vs. ExPASy Swiss-Prot
Match: EF1G3_ORYSJ (Elongation factor 1-gamma 3 OS=Oryza sativa subsp. japonica GN=Os06g0571400 PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 5.482e-76
Identity = 128/149 (85.91%), Postives = 138/149 (92.62%), Query Frame = -1
Query:  149 MILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 595
            MILD+WKRLYSNTK+NFRE+AIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVT+NKV GFLQRMDL RKYAFGKML+IG+ PP+KVKGLWLFRG +IPKFVMDE YDMELY+W K D+SDE QKERVN MIED EPFEGE LLDAKCFK
Sbjct:  268 MILDEWKRLYSNTKTNFREIAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVIGSTPPFKVKGLWLFRGQDIPKFVMDEVYDMELYEWTKVDLSDEAQKERVNAMIEDQEPFEGEDLLDAKCFK 416          
BLAST of DN617809 vs. ExPASy Swiss-Prot
Match: EF1G_TRYCR (Elongation factor 1-gamma OS=Trypanosoma cruzi PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.513e-25
Identity = 60/149 (40.27%), Postives = 93/149 (62.42%), Query Frame = -1
Query:  149 ILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKK-ADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 592
            +LD +KR YSNT +  R VA   F+  YD  GY+ ++C YKYN++N + F+T N + G+ QRM+  RKYAFG  LIIG E  + +  LW+FRG  +P  ++++  D EL+DW++ AD++   Q+ER+   +    P     +L+ + FK
Sbjct:  268 VLDAFKREYSNTDT--RTVAAPYFFQHYDAAGYTTFWCRYKYNEDNKMQFMTANLIRGWFQRMEHVRKYAFGVALIIGEERRHDIVALWVFRGRGMPA-IVEDVEDTELFDWEEVADVA--AQRERITDYLSWEGPTIPRPVLEGRVFK 411          
BLAST of DN617809 vs. ExPASy Swiss-Prot
Match: EF1G1_YEAST (Elongation factor 1-gamma 1 OS=Saccharomyces cerevisiae GN=CAM1 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 3.157e-23
Identity = 60/153 (39.22%), Postives = 88/153 (57.52%), Query Frame = -1
Query:  149 ILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPE-IPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPF----EGEALLDAKCFK 592
            +LDDWKR YSN  +  R VA+  FW+ Y+PE YSLW   YKYNDE T++F++ N V GF  R+  + KY FG +++ G      + G  + RG + +P F  D   D E YD+ K D ++++ KE +N M    +P     E + ++D K  K
Sbjct:  267 VLDDWKRKYSNEDT--RPVALPWFWEHYNPEEYSLWKVTYKYNDELTLTFMSNNLVGGFFNRLSASTKYMFGCLVVYGENNNNGIVGAVMVRGQDYVPAF--DVAPDWESYDYAKLDPTNDDDKEFINNMWAWDKPVSVNGEPKEIVDGKVLK 415          
BLAST of DN617809 vs. ExPASy Swiss-Prot
Match: EF1G2_YEAST (Elongation factor 1-gamma 2 OS=Saccharomyces cerevisiae GN=TEF4 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.032e-23
Identity = 61/153 (39.87%), Postives = 86/153 (56.21%), Query Frame = -1
Query:  149 ILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEI-PKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPF----EGEALLDAKCFK 592
            +LDDWKR YSN  +  R VA+  FW+ Y+PE YS+W   YKYNDE T++F++ N V GF  R+  + KY FG +++ G      + G  + RG +  P F  D   D E Y++ K D + EE KE VN M    +P     E + ++D K  K
Sbjct:  264 VLDDWKRKYSNDDT--RPVALPWFWEHYNPEEYSIWKVGYKYNDELTLTFMSNNLVGGFFNRLSASTKYMFGCLVVYGENNNNGIVGAVMVRGQDFAPAF--DVAPDWESYEYTKLDPTKEEDKEFVNNMWAWDKPVVVNGEDKEIVDGKVLK 412          
BLAST of DN617809 vs. ExPASy Swiss-Prot
Match: EF1G_CARAU (Elongation factor 1-gamma OS=Carassius auratus GN=eef1g PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 9.184e-23
Identity = 52/141 (36.88%), Postives = 88/141 (62.41%), Query Frame = -1
Query:  176 ILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECY--DMELYDWKKADISDEEQKERVNQMIEDHEPFEGE 592
            ++D++KR YSN  +    VA+  FWD +D EG+S+W+ +Y++ +E T+SF++ N ++G  QR+D  RK AF  +++ G      + G+W+FRG E+  F + E +  D E Y W+K D+  EE K     M++++  +EGE
Sbjct:  294 VMDEFKRKYSNEDT--LTVALPYFWDHFDREGFSIWYAEYRFPEELTMSFMSCNLITGMFQRLDKLRKNAFASVILFGANNDSCISGIWVFRGQEL-AFTLSEDWQIDYESYTWRKLDVDSEECK----TMVKEYFAWEGE 427          
The following BLAST results are available for this feature:
BLAST of DN617809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
EF1G_PRUAV1.180e-7888.59Elongation factor 1-gamma OS=Prunus avium PE=2 SV=... [more]
EF1G1_ORYSJ4.485e-7889.26Elongation factor 1-gamma 1 OS=Oryza sativa subsp.... [more]
EF1G2_ORYSJ9.991e-7888.59Elongation factor 1-gamma 2 OS=Oryza sativa subsp.... [more]
EF1G2_ARATH1.305e-7789.26Probable elongation factor 1-gamma 2 OS=Arabidopsi... [more]
EF1G1_ARATH1.305e-7789.26Probable elongation factor 1-gamma 1 OS=Arabidopsi... [more]
EF1G3_ORYSJ5.482e-7685.91Elongation factor 1-gamma 3 OS=Oryza sativa subsp.... [more]
EF1G_TRYCR7.513e-2540.27Elongation factor 1-gamma OS=Trypanosoma cruzi PE=... [more]
EF1G1_YEAST3.157e-2339.22Elongation factor 1-gamma 1 OS=Saccharomyces cerev... [more]
EF1G2_YEAST7.032e-2339.87Elongation factor 1-gamma 2 OS=Saccharomyces cerev... [more]
EF1G_CARAU9.184e-2336.88Elongation factor 1-gamma OS=Carassius auratus GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L12_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617809 ID=DN617809; Name=DN617809; organism=Citrus sinensis; type=EST; length=595bp
TTTTTTTTTTTTTTTTAAATTATAAGTTAATACTATAACACAAAATACTA
GACTTCGATCTTTCTGAATTCGAAACACAAACAAACTCTACCAATAACCA
AAGACAAACATGAACATCTTAAAACTAGAAAAAAGATTAAGCTCATCACT
TGAAGCACTTAGCATCCAAAAGAGCTTCACCCTCAAAAGGCTCGTGATCC
TCGATCATCTGGTTCACACGTTCCTTTTGCTCTTCGTCTGAGATGTCAGC
CTTCTTCCAGTCATACAATTCCATGTCATAGCACTCATCCATGACGAATT
TAGGAATTTCTGGGCCACGGAAGAGCCACAACCCCTTGACTTTGTATGGA
GGCTCGTTGCCGATAATTAGCATCTTTCCAAACGCATACTTGCGAGCCAG
ATCCATCCTCTGAAGAAACCCACTAACCTTGTTCAAGGTCACGAATGACA
CAGTATTCTCGTCATTGTATTTGTAATCACAGAACCAAAGTGAGTAACCC
TCAGGATCATACATGTCCCAGAATCCTTTAATTGCAACTTCACGGAAGTT
GGACTTCGTGTTTGAGTAAAGCCTCTTCCAGTCATCCAGAATCAT
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