DN617779

Overview
NameDN617779
Unique NameDN617779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10459 contig Csv1_Contig10459:27..727. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 2.830e-99
Identity = 165/214 (77.10%), Postives = 186/214 (86.92%), Query Frame = 1
Query:   61 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG-SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699
            G WINAHATFY              YGNLYSQGYG  TAALSTALF+ GLSCGACF++MC NDPQWC++G SI+VTATNFCPPGG CDPPNHHFDLSQP+++ IA Y++GI+PV+YRRVRCKR+GGIRFTINGHSYFNLVL+TNV GAGDVH+VS+KGSRT+WQ MSRNWGQNWQSNSYLNGQSLSFVVTTS+  SVVS++VAPP WSFGQTYT
Sbjct:   36 GPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGRSIVVTATNFCPPGGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTWSFGQTYT 249          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 1.315e-96
Identity = 169/232 (72.84%), Postives = 183/232 (78.88%), Query Frame = 1
Query:   34 SLVSSVQGY--GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699
            ++ S V GY  GGW+NAHATFY              YGNLYSQGYGTNTAALSTALFNNGLSCGACF+I C ND +WCL GSI+VTATNFCPP        GGWC+PP  HFDLSQPVFQ IAQYRAGIVPV YRRV C R GGIRFTINGHSYFNLVLITNV GAGDVH+  +KGSRT WQ MSRNWGQNWQSNSYLNGQSLSF VTTS+G ++VS +VA   WSFGQT+T
Sbjct:   14 AMTSHVNGYAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQTFT 245          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 1.315e-96
Identity = 170/238 (71.43%), Postives = 191/238 (80.25%), Query Frame = 1
Query:   10 VILCVGFLSLVSSVQGYGG-WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696
            V++ VG ++  SSV GYGG WINAHATFY              YGNLYSQGYGT+TAALSTALFNNGLSCG+CF+I C ND +WCL GSI+VTATNFCPP        GGWC+PP  HFDL+QPVFQ IAQYRAGIVPV YRRV C+R GGIRFTINGHSYFNLVLITNV GAGDVH+ +IKGSRT WQ MSRNWGQNWQSNSYLNGQ+LSF VTTS+G +VVS++ AP  WS+GQT+
Sbjct:    8 VMIMVGVMA--SSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTF 243          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 352.058 bits (902), Expect = 1.717e-96
Identity = 166/233 (71.24%), Postives = 187/233 (80.26%), Query Frame = 1
Query:   28 FLSLVSSVQGY-GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699
            F ++V SV GY  GW+NAHATFY              YGNLYSQGYGTNTAALSTALFNNGLSCGACF+I C +D  WCL G+IIVTATNFCPP        GGWC+PP HHFDLSQPVFQ IAQY+AG+VPV YRRV C R GGIRFTINGHSYFNLVL+TNV GAGDVH+V++KGSRTRWQ MSRNWGQNWQSN+ LNGQ+LSF VT S+G +VVS ++AP +WSFGQT+T
Sbjct:   16 FAAMVCSVHGYDAGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTFT 248          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 3.705e-91
Identity = 158/239 (66.11%), Postives = 182/239 (76.15%), Query Frame = 1
Query:   10 VILCVGFLSLVSSVQGYG-GWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699
            + L +  + +  SV GY  GW+NA ATFY              YGNLYSQGYGTNTAALSTALFN G SCGACFQI C +DP+WC+ G+I VT TNFCPP        GGWC+PP HHFDL+QP+F  IAQY+AG+VPV YRRV C+R GGIRFTINGHSYFNLVLITNV GAGDV +VSIKG+ TRWQ MSRNWGQNWQSN+ L+GQ+LSF VTTS+G +V+S +  P NWSFGQTYT
Sbjct:    9 ISLSLMMMIMWKSVDGYSSGWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYT 247          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 1.903e-87
Identity = 151/236 (63.98%), Postives = 179/236 (75.85%), Query Frame = 1
Query:   13 ILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696
            +L + FL+  +S  GYGGW +AHATFY              YGNLYSQGYGTNTAALSTALFN+G +CG+C+++ C N    CL GSI VTATNFCPP        GGWC+PP  HFD+++P F HIAQYRAGIVPV +RRV C + GG+RFT+NGHSYFNLVL+TNV GAGDV +VSIKGSRT WQPMSRNWGQNWQSN++L+GQSLSF VT S+G +V S +VA P W FGQT+
Sbjct:    6 VLFLLFLARQASAAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTF 241          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 1.903e-87
Identity = 151/236 (63.98%), Postives = 179/236 (75.85%), Query Frame = 1
Query:   13 ILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696
            +L + FL+  +S  GYGGW +AHATFY              YGNLYSQGYGTNTAALSTALFN+G +CG+C+++ C N    CL GSI VTATNFCPP        GGWC+PP  HFD+++P F HIAQYRAGIVPV +RRV C + GG+RFT+NGHSYFNLVL+TNV GAGDV +VSIKGSRT WQPMSRNWGQNWQSN++L+GQSLSF VT S+G +V S +VA P W FGQT+
Sbjct:    6 VLFLLFLARQASAAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTF 241          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 2.485e-87
Identity = 155/238 (65.13%), Postives = 177/238 (74.37%), Query Frame = 1
Query:   10 VILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTR-WQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696
            +I  +  L L  +    GGW   HATFY              YGNLY QGYGTNTAALSTALFNNGL+CGAC+++ C +DP+WCL  +I VTATNFCPP        GGWC+PP  HFDL++P F  IAQYRAGIVPV +RRV C + GGIRFTINGHSYFNLVLI+NV GAGDVHAVSIKGS+T+ WQ MSRNWGQNWQSNSY+N QSLSF VTTS+G ++VS  VAP NW FGQTY
Sbjct:   11 IISIISVLFLQGTHGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTY 248          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 9.771e-84
Identity = 146/229 (63.76%), Postives = 168/229 (73.36%), Query Frame = 1
Query:   40 VSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696
            +  +   G W NAHATFY              YGNLYSQGYGTNTAALSTALFNNG+SCGACF++ CANDPQWC  GS  I++TATNFCPP        GGWC+PP  HFDL+ PVF  IAQYRAGIVPV YRRV C++ GGIRFTINGH YFNLVLITNV GAGD+   S+KGSRT W  +SRNWGQNWQSN+ L GQ+LSF VT S+  +  S+++ P NW FGQT+
Sbjct:   22 IPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTF 250          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 2.843e-83
Identity = 148/243 (60.91%), Postives = 174/243 (71.60%), Query Frame = 1
Query:    1 ALWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699
            A+ V+      + +  V   G WINAHATFY              YGNLYSQGYG NTAALSTALFNNGLSCG+CF++ C NDP WCL G  SI++TATNFCPP        GGWC+PP  HFDL+ P+F  IA+Y+AGIVPV YRR+ C++ GGIRFTING  YFNLVL+TNV GAGDV  VS+KGS T+W  +SRNWGQNWQSN+ L GQSLSF V TS+G S  S ++AP NW FGQTY+
Sbjct:   10 AVMVVTAFTANAKIPGVYTGGPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYS 252          
The following BLAST results are available for this feature:
BLAST of DN617779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
EXPA5_ARATH2.830e-9977.10Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 ... [more]
EXPA1_ARATH1.315e-9672.84Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 ... [more]
EXP10_ARATH1.315e-9671.43Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=... [more]
EXP15_ARATH1.717e-9671.24Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=... [more]
EXP14_ARATH3.705e-9166.11Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=... [more]
EXPA4_ORYSJ1.903e-8763.98Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSI1.903e-8763.98Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4... [more]
EXPA8_ARATH2.485e-8765.13Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 ... [more]
EXPA4_ARATH9.771e-8463.76Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 ... [more]
EXPA9_ARATH2.843e-8360.91Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01K21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617779 ID=DN617779; Name=DN617779; organism=Citrus sinensis; type=EST; length=701bp
GCTCTTTGGGTGATTCTTTGTGTTGGGTTTCTCTCATTGGTCTCATCCGT
TCAAGGTTATGGAGGTTGGATTAATGCTCATGCAACTTTCTATGGAGGTG
GTGATGCTTCTGGCACAATGGGGGGCGCTTGTGGGTACGGCAATTTGTAC
AGCCAAGGTTATGGTACTAATACCGCAGCACTTAGCACTGCTTTGTTCAA
CAATGGCCTAAGTTGTGGAGCTTGCTTTCAAATTATGTGCGCTAATGACC
CGCAATGGTGCCTGCGTGGCTCCATCATTGTCACTGCCACTAACTTTTGC
CCTCCTGGAGGCTGGTGTGATCCTCCTAACCACCACTTTGATCTCTCTCA
GCCTGTCTTCCAACACATTGCCCAGTATAGAGCTGGTATTGTTCCTGTAA
TCTACAGAAGGGTGAGATGCAAGAGAAATGGGGGCATAAGGTTCACAATC
AATGGCCATTCTTACTTCAATTTAGTTCTAATAACAAACGTGTGAGGAGC
TGGTGACGTGCATGCTGTATCCATCAAAGGTTCAAGGACTAGATGGCAAC
CGATGTCGAGAAACTGGGGCCAAAACTGGCAAAGCAACTCGTATCTTAAT
GGACAAAGCCTCTCTTTTGTTGTGACCACAAGTAATGGCCACAGTGTTGT
TTCTTACCATGTTGCCCCTCCTAATTGGTCATTTGGGCAGACTTATACCG
G
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