DN617768

Overview
NameDN617768
Unique NameDN617768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8629 contig Csv1_Contig8629:36..694. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617768 vs. ExPASy Swiss-Prot
Match: ANTR2_ARATH (Probable anion transporter 2, chloroplastic OS=Arabidopsis thaliana GN=ANTR2 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.643e-50
Identity = 95/102 (93.14%), Postives = 101/102 (99.02%), Query Frame = -2
Query:  353 TQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGERVLE 658
            +QLSHV+TPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAV LY+IGTLVWNLFATGE++L+
Sbjct:  440 SQLSHVKTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVALYLIGTLVWNLFATGEKILD 541          
BLAST of DN617768 vs. ExPASy Swiss-Prot
Match: PHT41_ORYSJ (Probable anion transporter 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.008e-48
Identity = 89/102 (87.25%), Postives = 100/102 (98.04%), Query Frame = -2
Query:  353 TQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGERVLE 658
            TQLSH+ +PAMAVLCMACSQG+DAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ GSWDDVFKV+VVLY++GTLVWNLF+TGE++++
Sbjct:  428 TQLSHIDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVVLYLVGTLVWNLFSTGEKIID 529          
BLAST of DN617768 vs. ExPASy Swiss-Prot
Match: PHT44_ORYSJ (Probable anion transporter 4, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;4 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.844e-48
Identity = 92/102 (90.20%), Postives = 99/102 (97.06%), Query Frame = -2
Query:  353 TQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGERVLE 658
            T LS VRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ+GSWD VF+VAVVLYI+GT+VWN+F+TGE+VLE
Sbjct:  490 TLLSKVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQKGSWDSVFQVAVVLYIVGTVVWNVFSTGEKVLE 591          
BLAST of DN617768 vs. ExPASy Swiss-Prot
Match: ANTR1_ARATH (Sodium-dependent phosphate transport protein 1, chloroplastic OS=Arabidopsis thaliana GN=ANTR1 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.334e-43
Identity = 78/102 (76.47%), Postives = 94/102 (92.16%), Query Frame = -2
Query:  353 TQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGERVLE 658
            TQL H+ +P MAVLCMACSQG+DAFSQSGLYSNHQDI PRY+GVLLGLSNTAGVLAGV GTAATG+ILQ GSWDDVF ++V LY++GT++WNLF+TGE++++
Sbjct:  411 TQLKHIDSPTMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVLGTAATGHILQHGSWDDVFTISVGLYLVGTVIWNLFSTGEKIID 512          
BLAST of DN617768 vs. ExPASy Swiss-Prot
Match: ANTR3_ARATH (Probable anion transporter 3, chloroplastic OS=Arabidopsis thaliana GN=ANTR3 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.716e-15
Identity = 44/99 (44.44%), Postives = 58/99 (58.59%), Query Frame = -2
Query:  359 LSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-RGSWDDVFKVAVVLYIIGTLVWNLFATGERV 652
            L+  ++P+ A + M  +    +FSQ+G   N QDI P+YAG L G+SN AG LA +  T  TGY +Q  GS+     V   LY   T+ W LFATGERV
Sbjct:  413 LNFAKSPSCAAVFMTIALSLSSFSQAGFLLNMQDIAPQYAGFLHGISNCAGTLAAIVSTIGTGYFVQWLGSFQAFLTVTAFLYFATTVFWLLFATGERV 511          
BLAST of DN617768 vs. ExPASy Swiss-Prot
Match: PHT46_ORYSJ (Probable anion transporter 6 OS=Oryza sativa subsp. japonica GN=PHT4;6 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.241e-15
Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = -2
Query:  353 RTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG-----------SWDDVFKVAVVLYIIGTLVWNLFATGERVLE 640
            RTP+ A+ C + S G  A  ++G   NH D+ P++AG+++G+SNTAG LAG+ G   TG IL+             SW  VF V   L I  + ++ +F+TGE++ E
Sbjct:  322 RTPSGAIFCSSVSLGFLALGRAGFAVNHMDVAPKFAGIVMGISNTAGTLAGIVGVGLTGRILEAAKASNMDLTSSESWRTVFFVPGYLCIFSSFIFLIFSTGEKIFE 428          
BLAST of DN617768 vs. ExPASy Swiss-Prot
Match: PHT47_ORYSJ (Probable anion transporter 7 OS=Oryza sativa subsp. japonica GN=PHT4;7 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.927e-15
Identity = 41/107 (38.32%), Postives = 63/107 (58.88%), Query Frame = -2
Query:  353 RTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG-----------SWDDVFKVAVVLYIIGTLVWNLFATGERVLE 640
            RTP+  VLC + S G  A  ++G   NH D+ P++AG+++G+SNTAG LAG+ G   TG IL+             +W  VF V   L I  ++++ +F+TGE++ E
Sbjct:  333 RTPSGTVLCSSISLGFLALGRAGFAVNHMDVAPKFAGIVMGVSNTAGTLAGIVGVGLTGSILEGAKASNMDLTNSETWKTVFFVPGYLCIFSSIIFLIFSTGEKIFE 439          
BLAST of DN617768 vs. ExPASy Swiss-Prot
Match: PHT43_ORYSJ (Probable anion transporter 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.521e-15
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = -2
Query:  359 LSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR-GSWDDVFKVAVVLYIIGTLVWNLFATGERV 652
            L+  ++P +A   +  + G  +F  SG   N Q+I P+YAGVL G+SNTAG  A + GT   G+ + R GS+     +  +LY   TL W++FATGERV
Sbjct:  415 LNAAKSPVIASAWLTIAVGLKSFGHSGFLVNLQEIAPQYAGVLHGMSNTAGTFAAILGTVGAGFFVDRMGSFRGFLILTSLLYFSSTLFWDIFATGERV 513          
BLAST of DN617768 vs. ExPASy Swiss-Prot
Match: ANTR5_ARATH (Probable anion transporter 5 OS=Arabidopsis thaliana GN=ANTR5 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.453e-14
Identity = 42/107 (39.25%), Postives = 62/107 (57.94%), Query Frame = -2
Query:  353 RTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG-----------SWDDVFKVAVVLYIIGTLVWNLFATGERVLE 640
            RT    +LC + + G  A  ++G   NH DI PRYAG+++G+SNTAG LAG+ G   TG +L+             SW  VF +  +L I  ++V+ LF+TGER+ +
Sbjct:  326 RTENGVILCSSVALGFLALGRAGFAVNHMDIAPRYAGIVMGVSNTAGTLAGIIGVDLTGKLLEASKLVYSDLSHPESWRVVFFIPGLLCIFSSVVFLLFSTGERIFD 432          
BLAST of DN617768 vs. ExPASy Swiss-Prot
Match: PHT42_ORYSJ (Probable anion transporter 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;2 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.606e-13
Identity = 38/101 (37.62%), Postives = 59/101 (58.42%), Query Frame = -2
Query:  353 LSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-RGSWDDVFKVAVVLYIIGTLVWNLFATGERVLE 652
            L   +TP++A + M  +    +FSQ+G + N QDI P+YAG L GL+N  G +A +  T  TGY +Q  GS+     +  VLY   T+ +N +ATG+ + +
Sbjct:  435 LRFAQTPSVAAVLMTIALSLSSFSQAGYFCNVQDIAPKYAGSLHGLTNGIGTVAAIVSTIGTGYFVQWLGSFQAFLTLTAVLYFSATVFYNTYATGDLIFD 535          
The following BLAST results are available for this feature:
BLAST of DN617768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
ANTR2_ARATH1.643e-5093.14Probable anion transporter 2, chloroplastic OS=Ara... [more]
PHT41_ORYSJ2.008e-4887.25Probable anion transporter 1, chloroplastic OS=Ory... [more]
PHT44_ORYSJ5.844e-4890.20Probable anion transporter 4, chloroplastic OS=Ory... [more]
ANTR1_ARATH4.334e-4376.47Sodium-dependent phosphate transport protein 1, ch... [more]
ANTR3_ARATH1.716e-1544.44Probable anion transporter 3, chloroplastic OS=Ara... [more]
PHT46_ORYSJ2.241e-1538.32Probable anion transporter 6 OS=Oryza sativa subsp... [more]
PHT47_ORYSJ2.927e-1538.32Probable anion transporter 7 OS=Oryza sativa subsp... [more]
PHT43_ORYSJ6.521e-1541.41Probable anion transporter 3, chloroplastic OS=Ory... [more]
ANTR5_ARATH1.453e-1439.25Probable anion transporter 5 OS=Arabidopsis thalia... [more]
PHT42_ORYSJ1.606e-1337.62Probable anion transporter 2, chloroplastic OS=Ory... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01K16_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617768 ID=DN617768; Name=DN617768; organism=Citrus sinensis; type=EST; length=659bp
TTTTTTTAATTAAAGAACATATGGAGGTTTCCTCTTGAAGCATTACATGA
GCTCAGGCGAAGGTTTAATGGGTGCAAATTTCCCATCTCGTTCCCTGGGA
TTGGAAAAATGTATATAGGAAAGAAAAACCTCTAAAAGGGCATTTCAGAA
ACGCAAAAGTTGTAAAAGGGCCTCGCTAATCGGCGAATATCTTCCCTAGT
AGCATCTTAATTTAACCTTGCTTAGCAGGGTTTCATGCCCCAGCATGGAT
GGCATTGTTATCGCCTTTTGATTTTCCTTCAATTTCTTGATGACTTGGTC
TCTTCTTCTTTACTCATTACAGCATCTTCCTCCCATTCTTGCACTTCGTC
TACTCAAGAACTCTCTCTCCCGTTGCAAATAAGTTCCAGACTAAGGTGCC
AATGATGTATAAGACAACAGCTACCTTGAATACATCATCCCAAGAACCTC
GTTGGAGTATGTAACCGGTTGCAGCTGTACCGAAAACACCAGCAAGCACT
CCTGCTGTGTTTGATAGTCCTAAGAGAACTCCAGCATAGCGCGGCCCAAT
ATCTTGATGATTGGAATAAAGACCAGATTGTGAGAATGCATCAGATCCCT
GACTGCATGCCATGCATAGCACTGCCATTGCAGGAGTCCTGACATGGCTC
AGCTGTGTG
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