DN617760

Overview
NameDN617760
Unique NameDN617760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5749 contig Csv1_Contig5749:1..738. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSFA8_ARATH (Heat stress transcription factor A-8 OS=Arabidopsis thaliana GN=HSFA8 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.646e-68
Identity = 140/218 (64.22%), Postives = 158/218 (72.48%), Query Frame = 2
Query:    2 STDSIISWGQS-NESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLLQPKE-NNWRMA-EAGNMLEEVTEVGEPIASDNMLVRYHPPID 646
            +TDSIISW  S + SFVI D T FSVQLLP+YFKHSNFSSFIRQLNIYGFRK+D DRWEFANDGFVR QK LL N+ RRKN Q SEQ K    S    +     + S LWKEV+ LK  K  L QEL+K+RQYQE  D K+L L DRVQGME+SQQ+MLSFLVM M+NPS LVQLLQPKE N WR A E   ++EEVT+ GE  +    LV Y PP D
Sbjct:   32 TTDSIISWSPSADNSFVILDTTVFSVQLLPKYFKHSNFSSFIRQLNIYGFRKVDADRWEFANDGFVRGQKDLLKNVIRRKNVQSSEQSKHESTSTTYAQ-----EKSGLWKEVDILKGDKQVLAQELIKVRQYQEVTDTKMLHLEDRVQGMEESQQEMLSFLVMVMKNPSLLVQLLQPKEKNTWRKAGEGAKIVEEVTDEGESNSYGLPLVTYQPPSD 244          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSFA1_ORYSJ (Heat stress transcription factor A-1 OS=Oryza sativa subsp. japonica GN=HSFA1 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.308e-57
Identity = 111/230 (48.26%), Postives = 150/230 (65.22%), Query Frame = 2
Query:    2 STDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLLQPKENNWRMAEAGNMLEEVTEV-----GEPIASDNMLVRYHPPIDETPKPVLKPV 676
            +TD+++SWG  N SFV+W+  EF+  LLP+YFKHSNFSSF+RQLN YGFRK+D DRWEFAN+GF+R QKHLL  I RRK T G+ Q +  Q     V  C ++    + +E+E LK  KN L QEL++LRQ Q+T D++L  L  R+QGME+ QQQM+SFL  AM +P FL Q +Q  EN+ R   A N    + +       E  + D  +V+Y P I+E  K +L+ +
Sbjct:   50 ATDAVVSWGPGNNSFVVWNTPEFARDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKTINRRKPTHGNNQVQQPQLPAAPVPACVEVGKFGMEEEIEMLKRDKNVLMQELVRLRQQQQTTDHQLQTLGKRLQGMEQRQQQMMSFLAKAMHSPGFLAQFVQQNENSRRRIVASNKKRRLPKQDGSLDSESASLDGQIVKYQPMINEAAKAMLRKI 279          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HFA1A_ARATH (Heat stress transcription factor A-1a OS=Arabidopsis thaliana GN=HSFA1A PE=1 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 3.937e-54
Identity = 113/232 (48.71%), Postives = 150/232 (64.66%), Query Frame = 2
Query:    2 STDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKL---------VEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLLQPK-ENNWRMAEAG---NMLEEVTEVGEP-------IASDNMLVRYHP 637
            +TD+I+SW  +N SF++WD  EFS  LLP+YFKH+NFSSF+RQLN YGFRK+D DRWEFAN+GF+R QKHLL  I RRK+ QG     S  QS++L         +  C ++    L +EVE LK  KN L QEL+KLRQ Q+T DNKL +L   +Q ME+ QQQ++SFL  A+QNP+FL Q +Q + ++N  + EA     + E+ T   E         ASD  +V+Y P
Sbjct:   65 ATDAIVSWSPTNNSFIVWDPPEFSRDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKKISRRKSVQGHGSSSSNPQSQQLSQGQGSMAALSSCVEVGKFGLEEEVEQLKRDKNVLMQELVKLRQQQQTTDNKLQVLVKHLQVMEQRQQQIMSFLAKAVQNPTFLSQFIQKQTDSNMHVTEANKKRRLREDSTAATESNSHSHSLEASDGQIVKYQP 296          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSF8_SOLPE (Heat shock factor protein HSF8 OS=Solanum peruvianum GN=HSF8 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.145e-53
Identity = 111/242 (45.87%), Postives = 159/242 (65.70%), Query Frame = 2
Query:    2 STDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQG--SEQRKSLQQSEKLVEP---------CEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLLQPK-ENNWRMAEAG--NMLEEVTEVGEP--IASDNMLVRYHPPIDETPKPVLKPVT 679
            STD I+SW  +N SFV+WD  EF+  LLP+YFKH+NFSSF+RQLN YGFRK+D DRWEFAN+GF+R QKHLL +I RRK   G   +Q++    +++ ++P         C ++    L +EVE LK  KN L QEL++LRQ Q++ DN+L  +  R+QGME  QQQM+SFL  A+ +P FL Q +Q + E+N R+AE      +++  E  +P    +D  +V+Y P I+E  K +L+ ++
Sbjct:   54 STDKIVSWSPTNNSFVVWDPPEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKSISRRKPAHGHAQQQQQPHGHAQQQMQPPGHSASVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQSTDNQLQGMVQRLQGMELRQQQMMSFLAKAVNSPGFLAQFVQQQNESNKRIAEGSKKRRIKQDIESQDPSVTPADGQIVKYQPGINEAAKAMLRELS 295          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSF8_SOLLC (Heat shock factor protein HSF8 OS=Solanum lycopersicum GN=HSF8 PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.145e-53
Identity = 113/261 (43.30%), Postives = 162/261 (62.07%), Query Frame = 2
Query:    2 STDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQG--SEQRKSLQQSEKLVEP---------CEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLLQPK-ENNWRMAEAG--NMLEEVTEVGEP--IASDNMLVRYHPPIDETPKPVLKPVTDSXNQMASDTSDGMKDVFM 736
            STD I+SW  +N SFV+WD  EF+  LLP+YFKH+NFSSF+RQLN YGFRK+D DRWEFAN+GF+R QKHLL +I RRK   G   +Q++    +++ ++P         C ++    L +EVE LK  KN L QEL++LRQ Q+  DN+L  +  R+QGME  QQQM+SFL  A+  P FL Q +Q + E+N R+AE      +++  E  +P    +D  +V+Y P I+E  K +L+ ++   +    D      + F+
Sbjct:   52 STDKIVSWSPTNNSFVVWDPPEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKSISRRKPAHGHAQQQQQPHGNAQQQMQPPGHSASVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQATDNQLQGMVQRLQGMELRQQQMMSFLAKAVNRPGFLAQFVQQQNESNKRIAEGSKKRRIKQDIESQDPSVTPADGQIVKYQPGINEAAKAMLRELSKLDSSPRLDNFSNSPESFL 312          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HFA1D_ARATH (Heat stress transcription factor A-1d OS=Arabidopsis thaliana GN=HSFA1D PE=2 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 3.685e-52
Identity = 106/235 (45.11%), Postives = 145/235 (61.70%), Query Frame = 2
Query:    2 STDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQ----SEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLLQPK----ENNWRMAEAGN----MLEEVTEVGEPIASDNMLVRYHPPIDETPKPVLK 670
            +TDSI+SW  +N SF++W   EF+  LLP+ FKH+NFSSF+RQLN YGFRK+D DRWEFAN+GF+R QKHLL +I RRK   G  Q     Q        V  C ++    L +EVE LK  KN L QEL++LRQ Q++ DN+L  +  R+QGME  QQQ++SFL  A+Q+P FL Q LQ +    E+N R+++         + +    +    D  +V+Y PP+ E  K + K
Sbjct:   50 NTDSIVSWSANNNSFIVWKPPEFARDLLPKNFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLQSITRRKPAHGQGQGHQRSQHSNGQNSSVSACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQSTDNQLQTMVQRLQGMENRQQQLMSFLAKAVQSPHFLSQFLQQQNQQNESNRRISDTSKKRRFKRDGIVRNNDSATPDGQIVKYQPPMHEQAKAMFK 284          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HFA1B_ARATH (Heat stress transcription factor A-1b OS=Arabidopsis thaliana GN=HSFA1B PE=2 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.185e-50
Identity = 103/252 (40.87%), Postives = 153/252 (60.71%), Query Frame = 2
Query:    5 TDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLLQPKENNWRMAEAGN------MLEEVTEVGEPIAS--DNMLVRYHPPIDETPKPVLKPVTDSXNQMASDTSDGMKDVFM 736
            T+ ++SW   N SFV+W   EFS  LLP+YFKH+NFSSF+RQLN YGFRK+D DRWEFAN+GF+R +K LL +I RRK +   + ++  Q     V  C ++    + +EVE LK  KN L QEL++LRQ Q+  +N+L  +  +VQ ME+ QQQM+SFL  A+Q+P FL QL+Q   N+      G+       ++E    G+ +A+  +  +VRY P I+E  + +L+   ++      ++     D F+
Sbjct:   41 TNEVVSWSSGNNSFVVWSAPEFSKVLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGRKQLLKSIVRRKPSHVQQNQQQTQVQSSSVGACVEVGKFGIEEEVERLKRDKNVLMQELVRLRQQQQATENQLQNVGQKVQVMEQRQQQMMSFLAKAVQSPGFLNQLVQQNNNDGNRQIPGSNKKRRLPVDEQENRGDNVANGLNRQIVRYQPSINEAAQNMLRQFLNTSTSPRYESVSNNPDSFL 292          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HFA6B_ARATH (Heat stress transcription factor A-6b OS=Arabidopsis thaliana GN=HSFA6b PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.602e-47
Identity = 92/188 (48.94%), Postives = 129/188 (68.62%), Query Frame = 2
Query:    5 TDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEK--LVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLLQPKENNWRMAEA 562
            T+ ++SW +SN SF++WD   FSV LLPR+FKH+NFSSF+RQLN YGFRK++ DRWEFAN+GF+R QKHLL NI RRK +  S Q +  Q SE+  L   C ++    L  E+++L+  K  L  EL++LRQ Q++    L L+ ++++  E  Q+QM+SFL  AMQNP F+ QL++ KE    + EA
Sbjct:   75 TNHVVSWSKSNNSFIVWDPQAFSVTLLPRFFKHNNFSSFVRQLNTYGFRKVNPDRWEFANEGFLRGQKHLLKNIRRRKTSNNSNQMQQPQSSEQQSLDNFCIEVGRYGLDGEMDSLRRDKQVLMMELVRLRQQQQSTKMYLTLIEEKLKKTESKQKQMMSFLARAMQNPDFIQQLVEQKEKRKEIEEA 262          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HFA1E_ARATH (Heat stress transcription factor A-1e OS=Arabidopsis thaliana GN=HSFA1E PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.958e-45
Identity = 101/252 (40.08%), Postives = 148/252 (58.73%), Query Frame = 2
Query:    5 TDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQ-GSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQL-LQPKENNWRMAEAGNM----LEEVTEVGEPIAS--DNMLVRYHPPIDETPKPVLKPVTDSXNQMASDTSDGMKDVFM 736
            TD ++SW   N SFV+W+V EF+ Q LP+YFKH+NFSSF+RQLN YGFRK+D DRWEFAN+GF+R QK +L +I RRK  Q    Q+  +Q S   V  C ++    L +EVE L+  KN L QEL++LRQ Q+  ++ L  +  +V  ME+ QQQM+SFL  A+Q+P FL Q   Q  E N  ++E+       +E+    G    +     +VRY   +++    +L+ +    N  + ++       F+
Sbjct:   37 TDDVVSWSSGNNSFVVWNVPEFAKQFLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKQILKSIVRRKPAQVQPPQQPQVQHSS--VGACVEVGKFGLEEEVERLQRDKNVLMQELVRLRQQQQVTEHHLQNVGQKVHVMEQRQQQMMSFLAKAVQSPGFLNQFSQQSNEANQHISESNKKRRLPVEDQMNSGSHGVNGLSRQIVRYQSSMNDATNTMLQQIQQMSNAPSHESLSSNNGSFL 286          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSF30_SOLPE (Heat shock factor protein HSF30 OS=Solanum peruvianum GN=HSF30 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.966e-43
Identity = 86/176 (48.86%), Postives = 117/176 (66.48%), Query Frame = 2
Query:    2 STDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNT-QGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLL 526
            STD +ISW  +  SF++WD  +FS  LLPR+FKHSNFSSFIRQLN YGFRK+D DRWEFAN+GF+  QKHLL  I RR+N  Q   Q+ S          C +I +  + +E+E LK  KN L  E++KLRQ Q++  N+++ + ++++  E+ Q QM+SFL     NP+FL Q L
Sbjct:   44 STDQVISWSTTRNSFIVWDSHKFSTTLLPRFFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRNVGQSMNQQGS--------GACIEIGYYGMEEELERLKRDKNVLMTEIVKLRQQQQSTRNQIIAMGEKIETQERKQVQMMSFLAKIFSNPTFLQQYL 211          
The following BLAST results are available for this feature:
BLAST of DN617760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
HSFA8_ARATH1.646e-6864.22Heat stress transcription factor A-8 OS=Arabidopsi... [more]
HSFA1_ORYSJ1.308e-5748.26Heat stress transcription factor A-1 OS=Oryza sati... [more]
HFA1A_ARATH3.937e-5448.71Heat stress transcription factor A-1a OS=Arabidops... [more]
HSF8_SOLPE1.145e-5345.87Heat shock factor protein HSF8 OS=Solanum peruvian... [more]
HSF8_SOLLC1.145e-5343.30Heat shock factor protein HSF8 OS=Solanum lycopers... [more]
HFA1D_ARATH3.685e-5245.11Heat stress transcription factor A-1d OS=Arabidops... [more]
HFA1B_ARATH1.185e-5040.87Heat stress transcription factor A-1b OS=Arabidops... [more]
HFA6B_ARATH1.602e-4748.94Heat stress transcription factor A-6b OS=Arabidops... [more]
HFA1E_ARATH1.958e-4540.08Heat stress transcription factor A-1e OS=Arabidops... [more]
HSF30_SOLPE6.966e-4348.86Heat shock factor protein HSF30 OS=Solanum peruvia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01K11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617760 ID=DN617760; Name=DN617760; organism=Citrus sinensis; type=EST; length=738bp
GTCAACCGACTCGATAATCTCTTGGGGTCAAAGCAATGAGAGTTTTGTCA
TATGGGATGTGACTGAGTTTTCAGTTCAGTTGTTGCCTAGGTACTTCAAG
CACAGTAACTTCTCCAGCTTCATCAGGCAACTCAATATCTATGGGTTTAG
AAAAATTGACACAGACCGTTGGGAATTTGCAAATGATGGATTCGTTAGAG
ATCAGAAGCATTTGTTGAACAATATTTGTAGAAGGAAAAATACTCAAGGG
TCTGAGCAGCGAAAATCATTGCAGCAGTCAGAAAAGTTGGTTGAACCATG
TGAGAAAATTGACCATTCGGCACTGTGGAAGGAAGTTGAGAATTTGAAGG
CTGGTAAAAATGCACTTACACAGGAGTTGCTGAAACTTAGGCAGTACCAG
GAGACTGCAGATAATAAGTTGCTTCTCTTGAGGGACCGTGTTCAAGGAAT
GGAAAAAAGCCAGCAGCAGATGTTGTCATTCTTAGTGATGGCCATGCAAA
ATCCAAGTTTTTTGGTTCAGCTACTTCAACCAAAAGAAAATAACTGGCGC
ATGGCTGAAGCAGGCAATATGCTCGAAGAAGTTACAGAGGTTGGTGAACC
AATAGCTTCTGATAATATGTTAGTAAGATATCACCCACCAATAGATGAAA
CACCGAAGCCTGTTCTCAAACCAGTGACAGATTCANGAAACCAAATGGCA
TCTGATACTTCTGACGGCATGAAAGACGTATTCATGAA
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