DN617755

Overview
NameDN617755
Unique NameDN617755
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617755 vs. ExPASy Swiss-Prot
Match: NHX6_ARATH (Sodium/hydrogen exchanger 6 OS=Arabidopsis thaliana GN=NHX6 PE=1 SV=2)

HSP 1 Score: 294.664 bits (753), Expect = 2.858e-79
Identity = 152/184 (82.61%), Postives = 164/184 (89.13%), Query Frame = 2
Query:  104 LQISPA-NDPRGSPAKEQQAAGVGILLQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLIVGALANISNTETNIRAWFNFHEEXXXXXXXXXXXXQSGFSLSPKPFFSNFGAIVTFAIFGTFLASMVTGILVYLGGVMFLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDMNLYALVF 652
            LQISPA +DP+G   K+QQAAGVGILLQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLIVG LANISNTET+IR WFNFH+E            QSGFSL PKPFFSNFGAIVTF++ GTF+ASMVTG+LVYLGGVMFLMYRLPFVECLMFG+LISATDPVTVLSIFQELG+D+NLYALVF
Sbjct:    5 LQISPAIHDPQGQE-KQQQAAGVGILLQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLIVGGLANISNTETSIRTWFNFHDEFFFLFLLPPIIFQSGFSLQPKPFFSNFGAIVTFSVLGTFVASMVTGLLVYLGGVMFLMYRLPFVECLMFGSLISATDPVTVLSIFQELGSDVNLYALVF 187          
BLAST of DN617755 vs. ExPASy Swiss-Prot
Match: NHX5_ARATH (Sodium/hydrogen exchanger 5 OS=Arabidopsis thaliana GN=NHX5 PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 3.616e-74
Identity = 144/182 (79.12%), Postives = 158/182 (86.81%), Query Frame = 2
Query:  110 ISPA-NDPRGSPAKEQQAAGVGILLQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLIVGALANISNTETNIRAWFNFHEEXXXXXXXXXXXXQSGFSLSPKPFFSNFGAIVTFAIFGTFLASMVTGILVYLGGVMFLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDMNLYALVF 652
            ISP  +DP+G   K+QQAAGVGILLQIMMLVLSFVLGHVLRRH+F+YLPEAS SLLIGLIVG LANIS+TET+IR WFNFHEE            QSGFSL PKPFFSNFGAIVTFAI GTF+AS+VTG LVYLGG M+LMY+LPFVECLMFGALISATDPVTVLSIFQ++GTD+NLYALVF
Sbjct:    2 ISPVEHDPQGQ-VKQQQAAGVGILLQIMMLVLSFVLGHVLRRHRFHYLPEASGSLLIGLIVGILANISDTETSIRTWFNFHEEFFFLFLLPPIIFQSGFSLQPKPFFSNFGAIVTFAIIGTFVASVVTGGLVYLGGSMYLMYKLPFVECLMFGALISATDPVTVLSIFQDVGTDVNLYALVF 182          
BLAST of DN617755 vs. ExPASy Swiss-Prot
Match: SL9A8_CHICK (Sodium/hydrogen exchanger 8 OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.638e-21
Identity = 54/171 (31.58%), Postives = 94/171 (54.97%), Query Frame = 2
Query:  146 KEQQAAGVGILLQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLIVGALANISNTE--TNIRAWFNFHEEXXXXXXXXXXXXQSGFSLSPKPFFSNFGAIVTFAIFGTFLASMVTGILVYLGGVMFLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDMNLYALVF 652
            +E+Q++G+ I   +++L +  +L H+L +++ ++LPE+ A + +G+I+GA   I   +   N +    F               +SG+SL    FF N G+I  F++FGT +++ + G  +Y  G   ++Y+L   +   FG+LISA DPV  ++IF  L  D  L  LVF
Sbjct:   46 QEEQSSGMTIFFSLLVLAICIILVHLLIKYRLHFLPESVAVVSLGIIMGAFIKIIEAQKLANWKEEEMFRPNMFFLLLLPPIIFESGYSLHKGNFFQNIGSITLFSVFGTAISAFIVGGGIYFLGQADVIYKLNMTDSFAFGSLISAVDPVATIAIFNALNVDPVLNMLVF 216          
BLAST of DN617755 vs. ExPASy Swiss-Prot
Match: SL9A8_MACFA (Sodium/hydrogen exchanger 8 OS=Macaca fascicularis GN=SLC9A8 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.926e-20
Identity = 55/171 (32.16%), Postives = 94/171 (54.97%), Query Frame = 2
Query:  146 KEQQAAGVGILLQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLIVGALANISNTE--TNIRAWFNFHEEXXXXXXXXXXXXQSGFSLSPKPFFSNFGAIVTFAIFGTFLASMVTGILVYLGGVMFLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDMNLYALVF 652
            +E+Q++G+ I   +++L +  +L H+L R++ ++LPE+ A + +G+++GA+  I   +   N +    F               +SG+SL    FF N G+I  FA+FGT +++ V G  +Y  G   ++ +L   +   FG+LISA DPV  ++IF  L  D  L  LVF
Sbjct:   53 QEEQSSGMTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKIIEFKKLANWKEEEMFRPNMFFLLLLPPIIFESGYSLHKGNFFQNIGSITLFAVFGTAISAFVVGGGIYFLGQADVISKLNMTDSFAFGSLISAVDPVATIAIFNALHVDPVLNMLVF 223          
BLAST of DN617755 vs. ExPASy Swiss-Prot
Match: SL9A8_HUMAN (Sodium/hydrogen exchanger 8 OS=Homo sapiens GN=SLC9A8 PE=1 SV=4)

HSP 1 Score: 98.2117 bits (243), Expect = 3.926e-20
Identity = 55/171 (32.16%), Postives = 94/171 (54.97%), Query Frame = 2
Query:  146 KEQQAAGVGILLQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLIVGALANISNTE--TNIRAWFNFHEEXXXXXXXXXXXXQSGFSLSPKPFFSNFGAIVTFAIFGTFLASMVTGILVYLGGVMFLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDMNLYALVF 652
            +E+Q++G+ I   +++L +  +L H+L R++ ++LPE+ A + +G+++GA+  I   +   N +    F               +SG+SL    FF N G+I  FA+FGT +++ V G  +Y  G   ++ +L   +   FG+LISA DPV  ++IF  L  D  L  LVF
Sbjct:   53 QEEQSSGMTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKIIEFKKLANWKEEEMFRPNMFFLLLLPPIIFESGYSLHKGNFFQNIGSITLFAVFGTAISAFVVGGGIYFLGQADVISKLNMTDSFAFGSLISAVDPVATIAIFNALHVDPVLNMLVF 223          
BLAST of DN617755 vs. ExPASy Swiss-Prot
Match: SL9A8_RAT (Sodium/hydrogen exchanger 8 OS=Rattus norvegicus GN=Slc9a8 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.128e-20
Identity = 54/171 (31.58%), Postives = 94/171 (54.97%), Query Frame = 2
Query:  146 KEQQAAGVGILLQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLIVGALANISNTE--TNIRAWFNFHEEXXXXXXXXXXXXQSGFSLSPKPFFSNFGAIVTFAIFGTFLASMVTGILVYLGGVMFLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDMNLYALVF 652
            +E+Q++G+ I   +++L +  +L H+L R++ ++LPE+ A + +G+++GA+  +   +   N +    F               +SG+SL    FF N G+I  FA+FGT +++ V G  +Y  G   ++ +L   +   FG+LISA DPV  ++IF  L  D  L  LVF
Sbjct:   47 QEEQSSGMTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKVIEFKKLANWKEEEMFRPNMFFLLLLPPIIFESGYSLHKGNFFQNIGSITLFAVFGTAISAFVVGGGIYFLGQADVISKLNMTDSFAFGSLISAVDPVATIAIFNALHVDPVLNMLVF 217          
BLAST of DN617755 vs. ExPASy Swiss-Prot
Match: SL9A8_MOUSE (Sodium/hydrogen exchanger 8 OS=Mus musculus GN=Slc9a8 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.128e-20
Identity = 54/171 (31.58%), Postives = 94/171 (54.97%), Query Frame = 2
Query:  146 KEQQAAGVGILLQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLIVGALANISNTE--TNIRAWFNFHEEXXXXXXXXXXXXQSGFSLSPKPFFSNFGAIVTFAIFGTFLASMVTGILVYLGGVMFLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDMNLYALVF 652
            +E+Q++G+ I   +++L +  +L H+L R++ ++LPE+ A + +G+++GA+  +   +   N +    F               +SG+SL    FF N G+I  FA+FGT +++ V G  +Y  G   ++ +L   +   FG+LISA DPV  ++IF  L  D  L  LVF
Sbjct:   48 QEEQSSGMTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKVIEFKKLANWKEEEMFRPNMFFLLLLPPIIFESGYSLHKGNFFQNIGSITLFAVFGTAISAFVVGGGIYFLGQADVISKLNMTDSFAFGSLISAVDPVATIAIFNALHVDPVLNMLVF 218          
BLAST of DN617755 vs. ExPASy Swiss-Prot
Match: YDO6_SCHPO (Uncharacterized Na(+)/H(+) antiporter C15A10.06 OS=Schizosaccharomyces pombe GN=SPAC15A10.06 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.142e-19
Identity = 54/178 (30.34%), Postives = 92/178 (51.69%), Query Frame = 2
Query:  122 NDPRGSPAKEQQAAGVGILLQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLIVGALANISNTETNIRAWFNFHEEXXXXXXXXXXXXQSGFSLSPKPFFSNFGAIVTFAIFGTFLASMVTGILVYLGGVM-FLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDMNLYALVF 652
            +D    PA ++  +   + + +++L+ + +  + ++  K   + E   S+ +G++VG +  +S     I+   +FH               SG+ L    FF N G I+TFA  GTF++++  G+LVY+   + F    + FVE L  GA +SATDPVTVL+IF     D  LY ++F
Sbjct:   20 DDDGQDPALQELYSSWALFILLVLLIGALLTSYYVQSKKIRAIHETVISVFVGMVVGLIIRVS-PGLIIQNMVSFHSTYFFNVLLPPIILNSGYELHQSNFFRNIGTILTFAFAGTFISAVTLGVLVYIFSFLNFENLSMTFVEALSMGATLSATDPVTVLAIFNSYKVDQKLYTIIF 196          
BLAST of DN617755 vs. ExPASy Swiss-Prot
Match: SL9A6_HUMAN (Sodium/hydrogen exchanger 6 OS=Homo sapiens GN=SLC9A6 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.016e-16
Identity = 55/182 (30.22%), Postives = 94/182 (51.65%), Query Frame = 2
Query:  173 ILLQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLIVGAL--------ANISNTETNIRAWFN-------FHEEXXXXXXXXXXXXQSGFSLSPKPFFSNFGAIVTFAIFGTFLASMVTGILVYLGGVMFLMY-------RLPFVECLMFGALISATDPVTVLSIFQELGTDMNLYALVF 652
            +L+ I++L L+ +   + +  +  +L E   +++ GL+VG +        ++++N   +     +       F  E             +G+SL  + FF N G+I+ +A  GT ++  V G ++Y  G + LM           F +CL+FGA++SATDPVTVL+IF EL  D+ LYAL+F
Sbjct:   74 LLIFILLLTLTILTIWLFKHRRARFLHETGLAMIYGLLVGLVLRYGIHVPSDVNNVTLSCEVQSSPTTLLVTFDPEVFFNILLPPIIFYAGYSLKRRHFFRNLGSILAYAFLGTAISCFVIGSIMY--GCVTLMKVTGQLAGDFYFTDCLLFGAIVSATDPVTVLAIFHELQVDVELYALLF 253          
BLAST of DN617755 vs. ExPASy Swiss-Prot
Match: SL9A9_HUMAN (Sodium/hydrogen exchanger 9 OS=Homo sapiens GN=SLC9A9 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.867e-16
Identity = 58/222 (26.13%), Postives = 97/222 (43.69%), Query Frame = 2
Query:  152 QQAAGVGILLQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLIVGALANISNTETNIRAW------------------------------------------------FNFHEEXXXXXXXXXXXXQSGFSLSPKPFFSNFGAIVTFAIFGTFLASMVTGILVYLGGVMFLMYR-------LPFVECLMFGALISATDPVTVLSIFQELGTDMNLYALVF 652
            Q    V +L+   +L+L+ +   + + H+F +L E   +++ GLI+G +   +   T+I +                                                   F  E             +G+SL  + FF N G+I+T+A  GT ++ +V G+++Y G V  +++          F +CL FG+L+SATDPVTVL+IF EL  D +LY L+F
Sbjct:   17 QHQGAVELLVFNFLLILTILTIWLFKNHRFRFLHETGGAMVYGLIMGLILRYATAPTDIESGTVYDCVKLTFSPSTLLVNITDQVYEYKYKREISQHNINPHQGNAILEKMTFDPEIFFNVLLPPIIFHAGYSLKKRHFFQNLGSILTYAFLGTAISCIVIGLIMY-GFVKAMIHAGQLKNGDFHFTDCLFFGSLMSATDPVTVLAIFHELHVDPDLYTLLF 237          
The following BLAST results are available for this feature:
BLAST of DN617755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
NHX6_ARATH2.858e-7982.61Sodium/hydrogen exchanger 6 OS=Arabidopsis thalian... [more]
NHX5_ARATH3.616e-7479.12Sodium/hydrogen exchanger 5 OS=Arabidopsis thalian... [more]
SL9A8_CHICK4.638e-2131.58Sodium/hydrogen exchanger 8 OS=Gallus gallus PE=2 ... [more]
SL9A8_MACFA3.926e-2032.16Sodium/hydrogen exchanger 8 OS=Macaca fascicularis... [more]
SL9A8_HUMAN3.926e-2032.16Sodium/hydrogen exchanger 8 OS=Homo sapiens GN=SLC... [more]
SL9A8_RAT5.128e-2031.58Sodium/hydrogen exchanger 8 OS=Rattus norvegicus G... [more]
SL9A8_MOUSE5.128e-2031.58Sodium/hydrogen exchanger 8 OS=Mus musculus GN=Slc... [more]
YDO6_SCHPO1.142e-1930.34Uncharacterized Na(+)/H(+) antiporter C15A10.06 OS... [more]
SL9A6_HUMAN2.016e-1630.22Sodium/hydrogen exchanger 6 OS=Homo sapiens GN=SLC... [more]
SL9A9_HUMAN5.867e-1626.13Sodium/hydrogen exchanger 9 OS=Homo sapiens GN=SLC... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01K09_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617755 ID=DN617755; Name=DN617755; organism=Citrus sinensis; type=EST; length=654bp
AGATAGAAATCATCATCATGCGTGAAGGAGAAAACAACAACAATTGACAT
TGAATTTTAGGGCTCGAAAGTTGGGACATCGGGGTATAATGACGGGAGAG
GCATTGCAGATATCTCCGGCGAACGATCCTCGTGGAAGTCCCGCAAAGGA
GCAGCAAGCCGCTGGCGTCGGCATACTCCTCCAGATCATGATGCTTGTAC
TCTCTTTCGTCCTCGGCCACGTCCTTCGCCGTCACAAATTCTATTATCTT
CCGGAAGCCAGCGCTTCTCTTCTCATAGGTTTAATTGTTGGTGCACTGGC
TAATATCTCTAATACTGAAACAAATATTAGGGCTTGGTTTAATTTCCATG
AAGAGTTTTTCTTTCTATTTCTGTTGCCTCCGATCATATTTCAGTCAGGG
TTCAGCTTATCTCCGAAACCTTTTTTTTCTAACTTTGGAGCCATTGTGAC
ATTTGCTATTTTTGGAACCTTTTTAGCTTCAATGGTCACGGGTATACTAG
TTTACCTTGGTGGAGTGATGTTCCTCATGTACAGACTTCCATTTGTTGAG
TGCTTGATGTTTGGTGCTCTTATTTCAGCAACAGATCCTGTCACTGTTTT
GTCTATATTTCAGGAACTTGGCACGGATATGAACCTCTACGCATTGGTTT
TTGG
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