DN617732

Overview
NameDN617732
Unique NameDN617732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length480
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617732 vs. ExPASy Swiss-Prot
Match: ULA1_ARATH (NEDD8-activating enzyme E1 regulatory subunit OS=Arabidopsis thaliana GN=AXR1 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 4.129e-26
Identity = 52/65 (80.00%), Postives = 61/65 (93.85%), Query Frame = -2
Query:  285 DLGCNGSTLTEDLINEMCRFGAAELHAVAAFIGGVASQEVIKLITKQFVPMCGTFIFNGIDHKSQ 479
            DLGCNGS L +DLI+EMCRFGA+E+H V+AF+GG+ASQEVIKL+TKQFVPM GT+IFNGIDHKSQ
Sbjct:  472 DLGCNGSVLPDDLIHEMCRFGASEIHVVSAFVGGIASQEVIKLVTKQFVPMLGTYIFNGIDHKSQ 536          
BLAST of DN617732 vs. ExPASy Swiss-Prot
Match: ULA1_DROME (NEDD8-activating enzyme E1 regulatory subunit OS=Drosophila melanogaster GN=APP-BP1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 9.541e-15
Identity = 37/64 (57.81%), Postives = 54/64 (84.38%), Query Frame = -2
Query:  288 DLGCNGSTLTEDLINEMCRFGAAELHAVAAFIGGVASQEVIKLITKQFVPMCGTFIFNGIDHKS 479
            DLG + +T+++D+++E+CR+G AELHAV+AFIGG A+QEVIK+ITKQ+ P+  TFI+N I  +S
Sbjct:  457 DLGMH-ATISDDVLHEICRYGGAELHAVSAFIGGCAAQEVIKIITKQYKPIDNTFIYNAITTES 519          
BLAST of DN617732 vs. ExPASy Swiss-Prot
Match: ULA1_CAEEL (NEDD8-activating enzyme E1 regulatory subunit OS=Caenorhabditis elegans GN=ula-1 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 3.394e-12
Identity = 30/56 (53.57%), Postives = 45/56 (80.36%), Query Frame = -2
Query:  288 LTEDLINEMCRFGAAELHAVAAFIGGVASQEVIKLITKQFVPMCGTFIFNGIDHKS 455
            +T+  I E+CRFGAAELH +++++GG+A+QE+IKL T Q+VP+  TFIF+G   +S
Sbjct:  481 VTDTAIAEICRFGAAELHVISSYVGGIAAQEIIKLATNQYVPIDNTFIFDGHTQES 536          
BLAST of DN617732 vs. ExPASy Swiss-Prot
Match: ULA1_RAT (NEDD8-activating enzyme E1 regulatory subunit OS=Rattus norvegicus GN=Nae1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 9.874e-12
Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = -2
Query:  288 EDLINEMCRFGAAELHAVAAFIGGVASQEVIKLITKQFVPMCGTFIFNGIDHKS 449
            +D ++E CR+GAAE H VAAF+GG A+QEVIK+ITKQFV    T+I++G+   S
Sbjct:  476 DDYVHEFCRYGAAEPHTVAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTS 529          
BLAST of DN617732 vs. ExPASy Swiss-Prot
Match: ULA1_MOUSE (NEDD8-activating enzyme E1 regulatory subunit OS=Mus musculus GN=Nae1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.290e-11
Identity = 30/54 (55.56%), Postives = 42/54 (77.78%), Query Frame = -2
Query:  288 EDLINEMCRFGAAELHAVAAFIGGVASQEVIKLITKQFVPMCGTFIFNGIDHKS 449
            +D ++E CR+GAAE H +AAF+GG A+QEVIK+ITKQFV    T+I++G+   S
Sbjct:  476 DDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTS 529          
BLAST of DN617732 vs. ExPASy Swiss-Prot
Match: ULA1_MACFA (NEDD8-activating enzyme E1 regulatory subunit OS=Macaca fascicularis GN=NAE1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.290e-11
Identity = 30/54 (55.56%), Postives = 42/54 (77.78%), Query Frame = -2
Query:  288 EDLINEMCRFGAAELHAVAAFIGGVASQEVIKLITKQFVPMCGTFIFNGIDHKS 449
            +D ++E CR+GAAE H +AAF+GG A+QEVIK+ITKQFV    T+I++G+   S
Sbjct:  452 DDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTS 505          
BLAST of DN617732 vs. ExPASy Swiss-Prot
Match: ULA1_HUMAN (NEDD8-activating enzyme E1 regulatory subunit OS=Homo sapiens GN=NAE1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.290e-11
Identity = 30/54 (55.56%), Postives = 42/54 (77.78%), Query Frame = -2
Query:  288 EDLINEMCRFGAAELHAVAAFIGGVASQEVIKLITKQFVPMCGTFIFNGIDHKS 449
            +D ++E CR+GAAE H +AAF+GG A+QEVIK+ITKQFV    T+I++G+   S
Sbjct:  476 DDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTS 529          
BLAST of DN617732 vs. ExPASy Swiss-Prot
Match: ULA1_DANRE (NEDD8-activating enzyme E1 regulatory subunit OS=Danio rerio GN=nae1 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.290e-11
Identity = 31/54 (57.41%), Postives = 40/54 (74.07%), Query Frame = -2
Query:  288 EDLINEMCRFGAAELHAVAAFIGGVASQEVIKLITKQFVPMCGTFIFNGIDHKS 449
            +D I+E CR+GAAE H VAAF+GG A+QE IK+IT QFVP   TF++N +   S
Sbjct:  475 DDYIHEFCRYGAAEPHTVAAFLGGSAAQEAIKIITHQFVPFNNTFLYNAMSQTS 528          
BLAST of DN617732 vs. ExPASy Swiss-Prot
Match: ULA1_DICDI (NEDD8-activating enzyme E1 regulatory subunit OS=Dictyostelium discoideum GN=nae1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.873e-11
Identity = 30/61 (49.18%), Postives = 43/61 (70.49%), Query Frame = -2
Query:  297 DLGCNGSTLTEDLINEMCRFGAAELHAVAAFIGGVASQEVIKLITKQFVPMCGTFIFNGID 479
            ++  +   + +D I E  RFG +ELH +A+ +GGV SQE+IKLIT Q+ P+  TFIFNGI+
Sbjct:  452 EINISNDLVKDDYIAEFVRFGGSELHNIASLMGGVTSQEIIKLITHQYTPLNNTFIFNGIN 512          
BLAST of DN617732 vs. ExPASy Swiss-Prot
Match: ULA1_CHICK (NEDD8-activating enzyme E1 regulatory subunit OS=Gallus gallus GN=NAE1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.400e-11
Identity = 29/54 (53.70%), Postives = 42/54 (77.78%), Query Frame = -2
Query:  288 EDLINEMCRFGAAELHAVAAFIGGVASQEVIKLITKQFVPMCGTFIFNGIDHKS 449
            +D ++E CR+GAAE HA+AAF+GG A+QE+IK+IT QFV    T+I++G+   S
Sbjct:  477 DDYVHEFCRYGAAEPHAIAAFMGGAAAQEIIKVITGQFVIFNNTYIYSGMSQTS 530          
The following BLAST results are available for this feature:
BLAST of DN617732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
ULA1_ARATH4.129e-2680.00NEDD8-activating enzyme E1 regulatory subunit OS=A... [more]
ULA1_DROME9.541e-1557.81NEDD8-activating enzyme E1 regulatory subunit OS=D... [more]
ULA1_CAEEL3.394e-1253.57NEDD8-activating enzyme E1 regulatory subunit OS=C... [more]
ULA1_RAT9.874e-1257.41NEDD8-activating enzyme E1 regulatory subunit OS=R... [more]
ULA1_MOUSE1.290e-1155.56NEDD8-activating enzyme E1 regulatory subunit OS=M... [more]
ULA1_MACFA1.290e-1155.56NEDD8-activating enzyme E1 regulatory subunit OS=M... [more]
ULA1_HUMAN1.290e-1155.56NEDD8-activating enzyme E1 regulatory subunit OS=H... [more]
ULA1_DANRE1.290e-1157.41NEDD8-activating enzyme E1 regulatory subunit OS=D... [more]
ULA1_DICDI2.873e-1149.18NEDD8-activating enzyme E1 regulatory subunit OS=D... [more]
ULA1_CHICK6.400e-1153.70NEDD8-activating enzyme E1 regulatory subunit OS=G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01J21_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001J21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617732 ID=DN617732; Name=DN617732; organism=Citrus sinensis; type=EST; length=480bp
CCGGGAGAATCCAACTCCACGAAAATCACTCTGATATTCTTTAGTAAGTC
TGTCTTTACACGAAGATGAAGTGGTGATAACTAATAATTTCCAGAACTTC
ATCAAACTAAATGATGTGCCCCTCTCGTTACAATGCAAAGAATGCCTCAA
TTCATGAAATGTCATAAATGACATGAAAAGGAAAAAAAGGCTGTGGATCT
CCAGAAGATTGGTACTACATCACATGAACATAGTATCGGTTAATTCAGCA
TTCACAGCATCAAATTCCATCAAAGTGTCAACAATTGCGACTTATGATCA
ATGCCATTGAAGATGAATGTCCCACACATAGGAACAAACTGTTTTGTAAT
GAGCTTAATGACTTCCTGCGAGGCAACTCCTCCAATGAAGGCAGCAACAG
CATGGAGCTCTGCTGCACCAAAGCGACACATCTCGTTGATAAGATCCTCA
GTCAATGTTGAACCATTGCAGCCCAAGTCA
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