DN617728

Overview
NameDN617728
Unique NameDN617728
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length552
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9145 contig Csv1_Contig9145:317..868. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617728 vs. ExPASy Swiss-Prot
Match: AGM1_ARATH (Phosphoacetylglucosamine mutase OS=Arabidopsis thaliana GN=DRT101 PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.161e-49
Identity = 102/158 (64.56%), Postives = 121/158 (76.58%), Query Frame = -3
Query:   80 EHFLSWLEDKNQELSSTHEG-SEQQKAALRLLAVSKLINQAVGDALSGLLLVETILRHMGWSIHQWNALYQDLPSRQLKVKVGDRXXXXXXXXXXXXVKPPGIQEAINVETAKYRNGRSFIRPSGTEDVVRVYAEASTQEAADKLANSVAELVDRFLG 550
            E FLSWL  K ++L++  +G SE+ KA  RL+AVS LINQAVGDALSG+LLVE IL+H+GWSI +WN LY+DLPSRQ+KV+V DR            ++P GIQ+AIN E  KY  GR+FIRPSGTEDVVRVYAEASTQE AD LANSVA+LV  FLG
Sbjct:  397 ESFLSWLVSKQKDLTAKGQGGSEEHKAVSRLMAVSNLINQAVGDALSGVLLVEVILQHLGWSIEKWNELYKDLPSRQIKVEVPDRTAVVTTSEETEALRPMGIQDAINSEIKKYSRGRAFIRPSGTEDVVRVYAEASTQEDADSLANSVAQLVKSFLG 554          
BLAST of DN617728 vs. ExPASy Swiss-Prot
Match: AGM1_ORYSJ (Phosphoacetylglucosamine mutase OS=Oryza sativa subsp. japonica GN=Os07g0195400 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.772e-43
Identity = 92/157 (58.60%), Postives = 111/157 (70.70%), Query Frame = -3
Query:   80 EHFLSWLEDKNQELSSTHEGSEQQKAALRLLAVSKLINQAVGDALSGLLLVETILRHMGWSIHQWNALYQDLPSRQLKVKVGDRXXXXXXXXXXXXVKPPGIQEAINVETAKYRNGRSFIRPSGTEDVVRVYAEASTQEAADKLANSVAELVDRFLG 550
            +HF+S LE    E SS   GS Q +AA+RLLA S+LINQAVGDALSG+LLVE +L++ GWS   W  LY DLPSRQLKVKV DR             +P G+QE I+ E + Y +GR F+RPSGTEDVVRVYAEAS++EAAD LA  VA+ V+R LG
Sbjct:  406 DHFVSQLESLTSEFSSKAAGSSQHQAAMRLLATSQLINQAVGDALSGMLLVEAVLQYKGWSFQNWCDLYTDLPSRQLKVKVQDRNSIVTTDAERRVCQPNGLQELIDGEISNYSHGRCFVRPSGTEDVVRVYAEASSEEAADCLAKRVAQHVERILG 562          
BLAST of DN617728 vs. ExPASy Swiss-Prot
Match: AGM1_MOUSE (Phosphoacetylglucosamine mutase OS=Mus musculus GN=Pgm3 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 5.911e-31
Identity = 70/133 (52.63%), Postives = 91/133 (68.42%), Query Frame = -3
Query:   80 KAALRLLAVSKLINQAVGDALSGLLLVETILRHMGWSIHQWNALYQDLPSRQLKVKVGDRXXXXXXXXXXXXVKPPGIQEAINVETAKYRNGRSFIRPSGTEDVVRVYAEASTQEAADKLANSVAELVDRFLG 478
            KAA  L ++  L NQA GDA+S +L++E IL   G ++ QW+A+Y DLP+RQLKVKV DR            V PPG+QEAIN    KY   R+F+RPSGTED+VRVYAEA++QE+AD+LA  V+ LV +  G
Sbjct:  400 KAARTLASIIDLFNQAAGDAISDMLVIEAILALKGLTVQQWDAIYVDLPNRQLKVKVADRRVISTTDAERQAVTPPGLQEAINDLVKKYTLARAFVRPSGTEDIVRVYAEANSQESADRLAYEVSLLVFQLAG 532          
BLAST of DN617728 vs. ExPASy Swiss-Prot
Match: AGM1_HUMAN (Phosphoacetylglucosamine mutase OS=Homo sapiens GN=PGM3 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.246e-30
Identity = 70/136 (51.47%), Postives = 92/136 (67.65%), Query Frame = -3
Query:   80 EQQKAALRLLAVSKLINQAVGDALSGLLLVETILRHMGWSIHQWNALYQDLPSRQLKVKVGDRXXXXXXXXXXXXVKPPGIQEAINVETAKYRNGRSFIRPSGTEDVVRVYAEASTQEAADKLANSVAELVDRFLG 487
            +++KAA  L  +  L NQA GDA+S +L++E IL   G ++ QW+ALY DLP+RQLKV+V DR            V PPG+QEAIN    KY+  R+F+RPSGTEDVVRVYAEA +QE+AD LA+ V+  V +  G
Sbjct:  397 KKRKAAKMLENIIDLFNQAAGDAISDMLVIEAILALKGLTVQQWDALYTDLPNRQLKVQVADRRVISTTDAERQAVTPPGLQEAINDLVKKYKLSRAFVRPSGTEDVVRVYAEADSQESADHLAHEVSLAVFQLAG 532          
BLAST of DN617728 vs. ExPASy Swiss-Prot
Match: AGM1_SCHPO (Probable phosphoacetylglucosamine mutase 1 OS=Schizosaccharomyces pombe GN=SPAC13C5.05c PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.764e-27
Identity = 64/130 (49.23%), Postives = 82/130 (63.08%), Query Frame = -3
Query:   95 QQKAALRLLAVSKLINQAVGDALSGLLLVETILRHMGWSIHQWNALYQDLPSRQLKVKVGDRXXXXXXXXXXXXVKPPGIQEAINVETAKYRNGRSFIRPSGTEDVVRVYAEASTQEAADKLANSVAELV 484
            Q  A  +L + S LINQA+GDA+S LL   ++L  + W    W+  Y+DLP++  KVKV DR            V P G+QE I+   AKY  GRSF+R SGTEDVVRVYAEAST++AAD+L   V +LV
Sbjct:  388 QAAAIEQLQSYSVLINQAIGDAISDLLATISVLNALHWDASAWSNTYKDLPNKLAKVKVSDRTIYKSTDAERRLVSPDGLQEKIDALVAKYEKGRSFVRASGTEDVVRVYAEASTKQAADELCEKVCQLV 517          
BLAST of DN617728 vs. ExPASy Swiss-Prot
Match: AGM2_SCHPO (Probable phosphoacetylglucosamine mutase 2 OS=Schizosaccharomyces pombe GN=SPAC1296.01c PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 9.141e-24
Identity = 59/130 (45.38%), Postives = 80/130 (61.54%), Query Frame = -3
Query:   95 QQKAALRLLAVSKLINQAVGDALSGLLLVETILRHMGWSIHQWNALYQDLPSRQLKVKVGDRXXXXXXXXXXXXVKPPGIQEAINVETAKYRNGRSFIRPSGTEDVVRVYAEASTQEAADKLANSVAELV 484
            Q  A   L  V +LINQ  GDA++ LLLVE IL H   ++ +WN LY ++PSR ++ +V DR            V P G+QE I+   AKY  GR+F+R SGTED VRVYAEAS++  ++ LA  + EL+
Sbjct:  412 QFNALKTLKTVFELINQTDGDAITNLLLVEVILAHKNCTLKEWNQLYSEIPSRLIRCEVEDRSIYTTTDAEQKLVTPEGLQEKIDALVAKYTGGRAFVRSSGTEDAVRVYAEASSRGESEDLALRIVELL 541          
BLAST of DN617728 vs. ExPASy Swiss-Prot
Match: AGM1_CANAL (Phosphoacetylglucosamine mutase OS=Candida albicans GN=AGM1 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.841e-22
Identity = 59/130 (45.38%), Postives = 81/130 (62.31%), Query Frame = -3
Query:   95 QQKAALRLLAVSKLINQAVGDALSGLLLVETILRHMGWSIHQWNALYQDLPSRQLKVKVGDRXXXXXXXXXXXXVKPPGIQEAINVETAKYRNGRSFIRPSGTEDVVRVYAEASTQEAADKLANSVAELV 484
            + KA   L   S+LINQ VGDA+S LL V  ++ ++  S   W+  Y DLP++ +KV V DR            V+P G+Q+ I+   A+Y NGRSF+R SGTED VRVYAEA TQ   ++L+ +V+ELV
Sbjct:  414 EAKAIKVLQNFSQLINQTVGDAISDLLAVLIVVHYLKLSPSDWDNEYTDLPNKLVKVIVPDRSIFKTTNAERTLVEPKGMQDEIDKLVAQYPNGRSFVRASGTEDAVRVYAEADTQNNVEELSKAVSELV 543          
BLAST of DN617728 vs. ExPASy Swiss-Prot
Match: AGM1_YEAST (Phosphoacetylglucosamine mutase OS=Saccharomyces cerevisiae GN=PCM1 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 4.858e-17
Identity = 53/127 (41.73%), Postives = 69/127 (54.33%), Query Frame = -3
Query:   95 ALRLL-AVSKLINQAVGDALSGLLLVETILRHMGWSIHQWNALYQDLPSRQLKVKVGDRXXXXXXXXXXXXVKPPGIQEAINVETAKYRNGRSFIRPSGTEDVVRVYAEASTQEAADKLANSVAELV 472
            ALR L   S+LINQ VGDA+S +L V   L  +  S   W+  Y DLP++ +K  V DR            + P G+Q+ I++  AKY  GRSF+R SGTED VRVYAE        +  + V E V
Sbjct:  427 ALRTLKCFSELINQTVGDAISDMLAVLATLAILKMSPMDWDEEYTDLPNKLVKCIVPDRSIFQTTDQERKLLNPVGLQDKIDLVVAKYPMGRSFVRASGTEDAVRVYAECKDSSKLGQFCDEVVEHV 553          
BLAST of DN617728 vs. ExPASy Swiss-Prot
Match: AGM1_ENCCU (Probable phosphoacetylglucosamine mutase OS=Encephalitozoon cuniculi GN=PCM1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.203e-11
Identity = 47/139 (33.81%), Postives = 75/139 (53.96%), Query Frame = -3
Query:   95 LSSTHEGSEQQKAALRLLAVSKLINQAVGDALSGLLLVETILRHMGWSIHQWNALYQDLPSRQLKVKVGDRXXXXXXXXXXXXVKPPGIQEAINVETAKYRNGRSFIRPSGTEDVVRVYAEASTQEAADKLANSVAELV 511
            +    +GS +  A L++LA   L +  +GDAL+  ++ + ++      + +    +++ PSR L VK+ D+             +P  +Q+ I+VE      GRSF+RPSGTEDVVRVYAE  ++  AD L   VA+ V
Sbjct:  383 IDEIEKGSTKSHAILKILA--NLFDPCIGDALANFVIFKALMGSAD-DLRK----FRENPSRLLTVKIVDKNSIKVDQKNQVI-EPKELQDKIDVEALSL-GGRSFVRPSGTEDVVRVYAECPSEADADLLCLKVAQHV 512          
The following BLAST results are available for this feature:
BLAST of DN617728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
AGM1_ARATH2.161e-4964.56Phosphoacetylglucosamine mutase OS=Arabidopsis tha... [more]
AGM1_ORYSJ1.772e-4358.60Phosphoacetylglucosamine mutase OS=Oryza sativa su... [more]
AGM1_MOUSE5.911e-3152.63Phosphoacetylglucosamine mutase OS=Mus musculus GN... [more]
AGM1_HUMAN2.246e-3051.47Phosphoacetylglucosamine mutase OS=Homo sapiens GN... [more]
AGM1_SCHPO6.764e-2749.23Probable phosphoacetylglucosamine mutase 1 OS=Schi... [more]
AGM2_SCHPO9.141e-2445.38Probable phosphoacetylglucosamine mutase 2 OS=Schi... [more]
AGM1_CANAL3.841e-2245.38Phosphoacetylglucosamine mutase OS=Candida albican... [more]
AGM1_YEAST4.858e-1741.73Phosphoacetylglucosamine mutase OS=Saccharomyces c... [more]
AGM1_ENCCU5.203e-1133.81Probable phosphoacetylglucosamine mutase OS=Enceph... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01J19_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001J19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617728 ID=DN617728; Name=DN617728; organism=Citrus sinensis; type=EST; length=552bp
GATCAAAGATATGAAATCTGCAATTCAAATTAGCCATGTTTAGTCAGTGA
AAGAAGACCAGACACTAGGAGCTTCTGAAGCCTAGGAACCGATCTACAAG
TTCGGCTACAGAGTTGGCAAGCTTGTCTGCTGCTTCTTGTGTGGATGCCT
CTGCATATACACGTACGACATCCTCAGTGCCCGACGGCCGTATGAAAGAT
CGGCCATTACGATATTTTGCAGTTTCAACATTAATGGCTTCTTGAATGCC
TGGGGGCTTCACAGCTACAGTTTCTGCATTTGCTGTAACAACAGCGGTTC
TATCCCCAACTTTAACTTTAAGCTGCCTACTAGGTAGATCCTGATAAAGC
GCATTCCATTGATGTATTGACCACCCCATGTGTCGCAAAATAGTCTCCAC
CAAGAGCAAACCACTCAAAGCATCTCCAACAGCTTGGTTGATCAACTTAC
TAACTGCCAAAAGTCTCAAAGCAGCTTTTTGCTGTTCAGAACCTTCATGT
GTGGAAGAAAGCTCTTGATTTTTGTCCTCTAACCAAGATAAGAAATGTTC
TG
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