DN617722

Overview
NameDN617722
Unique NameDN617722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9213 contig Csv1_Contig9213:62..635. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617722 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.440e-38
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = -3
Query:  351 GQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 572
            GQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA
Sbjct:  421 GQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 494          
BLAST of DN617722 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.133e-28
Identity = 55/74 (74.32%), Postives = 63/74 (85.14%), Query Frame = -3
Query:  351 GQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 572
            G  LVDDW CLK++VRTFE+HCG+LSQYGMKHMRS AN+CN GI KE+M EASAQAC  IP+ PWSSL +GFSA
Sbjct:  411 GSALVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPWSSLQRGFSA 484          
BLAST of DN617722 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.704e-28
Identity = 55/74 (74.32%), Postives = 63/74 (85.14%), Query Frame = -3
Query:  351 GQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 572
            G PLVD+W CLK++V+TFE+HCG+LSQYGMKHMRS ANICN GI  E MAEASAQAC +IP+ PWSSL  GFSA
Sbjct:  420 GSPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEPMAEASAQACASIPANPWSSLQGGFSA 493          
BLAST of DN617722 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.493e-27
Identity = 53/74 (71.62%), Postives = 63/74 (85.14%), Query Frame = -3
Query:  351 GQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 572
            GQPLVDDW CLK+ VR FE HCG+LSQYG+KHMRS ANICN GI  E+M EA++QAC  +P+GPWSSL++GFSA
Sbjct:  421 GQPLVDDWNCLKNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGPWSSLNRGFSA 494          
BLAST of DN617722 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 2.548e-27
Identity = 53/74 (71.62%), Postives = 62/74 (83.78%), Query Frame = -3
Query:  351 GQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 572
            G+PLVDDW CLKSLVR FE HCG+LSQYG+KHMRS+AN+CN GI   +M EA+ QAC  IP+ PWSSLD+GFSA
Sbjct:  405 GEPLVDDWDCLKSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSPWSSLDRGFSA 478          
BLAST of DN617722 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.037e-20
Identity = 43/74 (58.11%), Postives = 53/74 (71.62%), Query Frame = -3
Query:  351 GQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 572
            G PLVDDWGCLKS+VR FE+ CG+L+QYGMKHMR+ ANICN G+    M EA   AC    +G W   ++G+SA
Sbjct:  424 GSPLVDDWGCLKSMVRVFETCCGSLTQYGMKHMRTFANICNAGVSHTSMEEACNAACSGHDAGQWHPTNQGYSA 497          
BLAST of DN617722 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.776e-20
Identity = 42/74 (56.76%), Postives = 54/74 (72.97%), Query Frame = -3
Query:  351 GQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 572
            G  LVDDW CLKS+VR FE+HCG L+QYGMKHMR+ ANICN+G+ +  M EA   ACE   +G +   ++G+SA
Sbjct:  422 GSSLVDDWTCLKSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSEASMEEACLAACEGYNAGLFHPSNRGYSA 495          
BLAST of DN617722 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 3.335e-19
Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = -3
Query:  402 GQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQAC 572
            G PLVDDW CLKS+VR FE HCG+L+QYGMKHMR+ AN+CN G+ KE M EAS  AC
Sbjct:  411 GLPLVDDWECLKSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAAC 467          
BLAST of DN617722 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.688e-19
Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = -3
Query:  351 GQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 572
            G PLVDDW CLKS+VR FE+HCG+L+QYGMKHMR+  N+CN+G+ K  M EA   AC    +G     + G+SA
Sbjct:  402 GLPLVDDWTCLKSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSKASMEEACKAACGGYDAGLLYPSNTGYSA 475          
BLAST of DN617722 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.162e-18
Identity = 40/74 (54.05%), Postives = 53/74 (71.62%), Query Frame = -3
Query:  351 GQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 572
            G PLVDDW CLKS+VR +E+HCG+L+QYGMKHMR+ ANICN+G+ +  M +A   AC    +G     + G+SA
Sbjct:  420 GLPLVDDWTCLKSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSETSMEKACVAACGGYHAGLLHPSNTGYSA 493          
The following BLAST results are available for this feature:
BLAST of DN617722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VPE_CITSI1.440e-38100.00Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPE1_PHAVU5.133e-2874.32Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPE_VICSA6.704e-2874.32Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPEG_ARATH1.493e-2771.62Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPEA_ARATH2.548e-2771.62Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_RICCO1.037e-2058.11Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE_SOYBN8.776e-2056.76Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPEB_ARATH3.335e-1970.18Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
LEGU_CANEN5.688e-1955.41Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPE2_PHAVU2.162e-1854.05Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01J16_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001J16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617722 ID=DN617722; Name=DN617722; organism=Citrus sinensis; type=EST; length=574bp
TTAATCCAAAATTATGAGCTTTTATTTCAATATTATAGAGCAACACCACG
AAGAGGGTTGAGTTGCACGGTCTACAAATCAGGAACAAATATAGCTACAT
AAGCATAAAATAGCATCGCATACATCCAAAATATATACTATCAAATTACA
ACTGCGGTCTGGCAGGGAAGAGCTTTTAAATATAATAATTACAAGGAAGC
AATCACCAGCCAAATGAAAATAGACATTGCCATAAATGGAAGCAATCATC
AGCCAAATGAAAATAGATATTGCCATATTGGCGACTATAATGAAAACTAA
CATATTTCAAGAACTGGCTTATGATATTCGCACAGTTCTCGGCTTCTTTA
TGCACTGAATCCTTTGTCGAGAGAACTCCAAGGACCAGAAGGAATATTTT
CACAGGCTTGTGCTGATGCTTCCGCCATCTTCTCTTTCCCAATTCCTGTA
TTACAGATGTTTGCAAGAGAACGCATGTGCTTCATTCCATATTGCGATAG
AGCTCCACAGTGCGACTCAAAAGTCCTCACCAGTGATTTGAGGCAGCCCC
AGTCATCAACAAGAGGCTGACCAG
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