DN617685

Overview
NameDN617685
Unique NameDN617685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN617685 vs. ExPASy Swiss-Prot
Match: GYP7_YARLI (GTPase-activating protein GYP7 OS=Yarrowia lipolytica GN=GYP7 PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11
Identity = 37/134 (27.61%), Postives = 72/134 (53.73%), Query Frame = -1 
Query:  289 DEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRMVVVLFRRELTFEQTLCLWEVIWTDQAAIRAGIAKSAWGRMRLRAPPTDDLLLYAIAACVLQRRKLIIEKYSSMDEIMRECNSMAGHLDVWKLL 690
            D+ G+R QL  +  +++     LY+HLE+ ++ + FF +RM++V F+REL ++  L LWEV+WTD                      +   +L+   A + + + ++I+  +  DEI++  N ++  +D+ +LL
Sbjct:  554 DQSGMRNQLLCLDHLVQFMLPSLYKHLEKTESTNLFFFFRMLLVWFKRELLWDDVLRLWEVLWTDYL--------------------SSQFVLFVCLAILDKHKDVMIDHLAGFDEILKYMNELSMTIDLDELL 667
The following BLAST results are available for this feature:
BLAST of DN617685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GYP7_YARLI1.292e-1127.61GTPase-activating protein GYP7 OS=Yarrowia lipolyt... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01I20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001I20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617685 ID=DN617685; Name=DN617685; organism=Citrus sinensis; type=EST; length=696bp
CATAAAATCACTACTAATTTTGCAGAAATGCCACTGTCACTCGAATGAAC
CATGAGCGCGGGCAGTACATCATAAATCCATACATAATTTAATGGGTACA
GGAATTGCCTATCAGATGCTTGTTTTCAAGCAGAGTGTAAAGTGACCGGA
ATATCCCTTAGTTTAGAAAGGGATCACCGGATGTTCAACAACACCAAATA
ATCGAAAAGAAGAATCATTGAAGAGCAATGACAAAGGCATTCCTTAAATC
TTGTCATGCAAAGTGACAACCAAATCGTGGGCATCATCTAAAAGCTTCCA
AACATCAAGATGTCCAGCCATGCTGTTGCATTCCCTCATGATCTCATCCA
TGCTACTATATTTCTCTATGATCAATTTCCTCCTTTGCAGTACACAGGCT
GCAATTGCATAAAGCAATAGGTCATCGGTAGGAGGGGCTCTTAGCCTCAT
CCTTCCCCAGGCCGATTTAGCAATTCCAGCACGAATTGCTGCTTGGTCTG
TCCATATCACCTCCCAGAGGCAAAGTGTCTGCTCAAAAGTTAGCTCCCTC
CTAAAAAGAACCACCACCATTCTGTACACAAAGAAACAATCTTCTGCTTG
AAGCTGTTCCAGGTGCCTGTAGAGATGATTATCCTTGCACTTGATTATCT
TGGAAACAATACTCAACTGCCTTCTTATTCCCACTTCATCCAGCCT
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