DN617681

Overview
NameDN617681
Unique NameDN617681
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617681 vs. ExPASy Swiss-Prot
Match: NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 8.385e-14
Identity = 42/108 (38.89%), Postives = 61/108 (56.48%), Query Frame = -3
Query:  313 WDLPTESKTESEDQVFYFFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQIEAGNGLTGTKKFLTFY-CRGPDSKVPVKTDWVVHEYHAKDDPRY-----EKEFVLCCI 618
            WDLP +SK +S D  +YFF     KY N ++ +R TE G WK T KD +I  G+ + G KK L ++  R P  +   +T+WV+HEY   D+        ++ +VLC I
Sbjct:   52 WDLPDKSKLKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRGE---RTNWVMHEYRLSDEDLKKAGVPQEAYVLCRI 156          
BLAST of DN617681 vs. ExPASy Swiss-Prot
Match: NAC74_ORYSJ (NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.099e-13
Identity = 41/109 (37.61%), Postives = 59/109 (54.13%), Query Frame = -3
Query:  310 WDLPTESKTESEDQVFYFFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQIEAGNGLTGTKKFLTFY-CRGPDSKVPVKTDWVVHEYHAKDD-----PRYEKEFVLCCIT 618
            WDLP +    ++D  ++FF     KY N +R +R T AG WK T KD  I+ G    GTKK L F+  R P  +   +T+W++HEY+  +      P  +  +VLC IT
Sbjct:   52 WDLPAKCDVPTQDNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQTIGTKKTLVFHEGRPPTGR---RTEWIMHEYYIDERECQACPDMKDAYVLCRIT 157          
BLAST of DN617681 vs. ExPASy Swiss-Prot
Match: NAC68_ARATH (NAC domain-containing protein 68 OS=Arabidopsis thaliana GN=NAC68 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.748e-11
Identity = 44/127 (34.65%), Postives = 71/127 (55.91%), Query Frame = -3
Query:  253 DLPTESKTESEDQVFYFFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQI--EAGNGLT-GTKKFLTFYCRGPDSKVP--VKTDWVVHEYHAKDDPRYEKEFVLCCIT-NGEASAYVDDGSETNTADN 615
            DLP  ++ +SED  +YFF    Y   N  ++ R T +G WK T  D +I  + GNG+  G KK L ++    + K P  V+T WV+HEYH    P +++++V+C +   GEA+    + S +  +D+
Sbjct:   50 DLPKLARIQSEDLEWYFFSPIEYTNPNKMKMKRTTGSGFWKPTGVDREIRDKRGNGVVIGIKKTLVYH----EGKSPHGVRTPWVMHEYHITCLPHHKRKYVVCQVKYKGEAAEISYEPSPSLVSDS 172          
BLAST of DN617681 vs. ExPASy Swiss-Prot
Match: NAC69_ARATH (NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.895e-11
Identity = 41/131 (31.30%), Postives = 63/131 (48.09%), Query Frame = -3
Query:  235 LPTESKTESEDQVFYFFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQIE---AGNGLTGTKKFLTFYCRGPDSKVP--VKTDWVVHEYHAKDDPRYEKEFVLCCITNGEASAYVDDGSETNTADNDAWVEE 612
            LP+ SK +S+D V+YFF    Y         R T +G WK T  D +I+      G  G KK L +Y    + +VP  V T WV+HEYH    P+ ++ +V+C +        V  G   ++  + + V +
Sbjct:   50 LPSLSKIKSDDPVWYFFCPKEYTSAKKKVTKRTTSSGYWKATGVDRKIKDKRGNRGEIGIKKTLVYY----EGRVPKGVWTPWVMHEYHITCLPQDQRNYVICQVMYKGEDGDVPSGGNNSSEPSQSLVSD 176          
BLAST of DN617681 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.895e-11
Identity = 41/111 (36.94%), Postives = 52/111 (46.85%), Query Frame = -3
Query:  313 WDLPTESKTESEDQVFYFFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQIEAGNGLTGTKKFLTFYCRGPDSKVPVKTDWVVHEYHAKDDPRYE---------KEFVLCCI 618
            W LP   KTE  +  +YFF     KY N  R +R   +G WK T  D  I +G+   G KK L FY   P     +KTDW++HEY   D  +            E+VLC I
Sbjct:   52 WQLP--EKTEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPK--GIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRI 158          
The following BLAST results are available for this feature:
BLAST of DN617681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
NAC78_ARATH8.385e-1438.89NAC domain-containing protein 78 OS=Arabidopsis th... [more]
NAC74_ORYSJ7.099e-1337.61NAC domain-containing protein 74 OS=Oryza sativa s... [more]
NAC68_ARATH1.748e-1134.65NAC domain-containing protein 68 OS=Arabidopsis th... [more]
NAC69_ARATH3.895e-1131.30NAC domain-containing protein 69 OS=Arabidopsis th... [more]
NAC29_ARATH3.895e-1136.94NAC domain-containing protein 29 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01I18_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001I18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617681 ID=DN617681; Name=DN617681; organism=Citrus sinensis; type=EST; length=620bp
TTTTTTTTTTTTTTTTTAACGAGTCTCAAAGATTACCAGATAACATCACA
TTATCAATAATAATAGTACTTTCCTCCTAAGAGGATTTCATAGTTCTTTA
CAATGCTGCTTAAGATTACGGTACTTTCCTCCTAAGAGGATTTCATAATT
GTTTGCATGCCTCCTTAAAATTACAGTACTTTCCTCCTAAGAGGATTTTA
TAATTGTTTACAAGCTACTTAAGATTACAGAACGTTCTTCCACCCATGCA
TCGTTGTCAGCAGTGTTTGTCTCACTGCCATCATCTACATAAGCTGAAGC
TTCTCCATTTGTTATGCAACACAGAACAAATTCCTTCTCATAACGGGGGT
CGTCCTTGGCATGGTACTCATGCACAACCCAGTCGGTCTTAACTGGTACC
TTAGAATCAGGACCACGGCAGTAGAAAGTCAAGAACTTTTTGGTACCGGT
AAGGCCGTTTCCAGCTTCGATTTGGGAATCTTTACTGGTAATTTTCCATT
GCCCTGCTTCTGTTCTTCTGTCGACCCGGTTACTGTTCCTGTACTTGTAA
CGAGGTTCATAGAAAAAGTAAAAAACTTGATCCTCAGACTCAGTTTTTGA
TTCCGTTGGTAAGTCCCATG
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