DN617676

Overview
NameDN617676
Unique NameDN617676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length493
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3393 contig Csv1_Contig3393:1454..1946. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617676 vs. ExPASy Swiss-Prot
Match: NAT6_ARATH (Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 2.897e-46
Identity = 81/92 (88.04%), Postives = 85/92 (92.39%), Query Frame = -3
Query:  216 YFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 491
            YFNEYTAI G+GPVHT  RWFNDMVN+PFSSEPFVAG VAFFLDNTLHKKD  +RKDRG+HWWDKF SFKGDTRSEEFYSLPFNLNKYFPSV
Sbjct:  441 YFNEYTAIKGYGPVHTGARWFNDMVNVPFSSEPFVAGSVAFFLDNTLHKKDSSIRKDRGKHWWDKFRSFKGDTRSEEFYSLPFNLNKYFPSV 532          
BLAST of DN617676 vs. ExPASy Swiss-Prot
Match: NAT5_ARATH (Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 8.723e-43
Identity = 71/92 (77.17%), Postives = 82/92 (89.13%), Query Frame = -3
Query:  216 YFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 491
            YFNE+TAI G+GPVHT  RWFNDMVN+PFSS+ FV GCVA+ LD TLHKKDG +RKDRG+HWWD+FW+FK D R+EEFY+LPFNLNKYFPSV
Sbjct:  437 YFNEHTAIKGYGPVHTGARWFNDMVNVPFSSKAFVGGCVAYLLDTTLHKKDGSIRKDRGKHWWDRFWTFKNDPRTEEFYALPFNLNKYFPSV 528          
BLAST of DN617676 vs. ExPASy Swiss-Prot
Match: NAT7_ARATH (Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 4.953e-38
Identity = 68/92 (73.91%), Postives = 77/92 (83.70%), Query Frame = -3
Query:  216 YFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 491
            YFN+YTA+N +GPVHT  RWFNDM+N+PFSS+ FVAG +AFFLD T+  KD   RKDRG  WWD+F SFK DTRSEEFYSLPFNLNKYFPSV
Sbjct:  447 YFNQYTAVNKYGPVHTHARWFNDMINVPFSSKAFVAGILAFFLDVTMSSKDSATRKDRGMFWWDRFMSFKSDTRSEEFYSLPFNLNKYFPSV 538          
BLAST of DN617676 vs. ExPASy Swiss-Prot
Match: NAT8_ARATH (Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 5.489e-29
Identity = 55/91 (60.44%), Postives = 69/91 (75.82%), Query Frame = -3
Query:  219 YFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 491
            YF +YT +  +GPV TS  WFN+++N+PFSS+ FV+G +AFFLD TL  KD   +KDRG  WW +F SF+ D RSEEFYSLP NL+KYFPS
Sbjct:  448 YFYQYTTLETYGPVRTSATWFNNIINVPFSSKAFVSGILAFFLDTTLPPKDKTTKKDRGLVWWKRFKSFQSDNRSEEFYSLPLNLSKYFPS 538          
BLAST of DN617676 vs. ExPASy Swiss-Prot
Match: NAT2_ARATH (Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 2.234e-22
Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = -3
Query:  222 YFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFP 491
            YF +++     GP HT+  WFND +N  F S P VA  VA FLDNTL  K+    +DRG  WW KF +FKGD+R+EEFY+LPFNLN++FP
Sbjct:  435 YFRDFSMKALHGPAHTNAGWFNDFLNTIFLSSPMVALMVAVFLDNTLDYKE--TARDRGLPWWAKFRTFKGDSRNEEFYTLPFNLNRFFP 522          
BLAST of DN617676 vs. ExPASy Swiss-Prot
Match: LPE1_MAIZE (Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 9.385e-21
Identity = 49/92 (53.26%), Postives = 60/92 (65.22%), Query Frame = -3
Query:  216 YFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 491
            YF  Y    GFGPVHT    FN MVN+ FSS   VA  +A+ LD T    +  V+KDRG  WW+KF S+K D RSEEFY LP+ L++YFPS+
Sbjct:  436 YFRVYEMFFGFGPVHTHSVAFNVMVNVIFSSPATVAAILAYLLDCTHLYWEASVKKDRGWFWWEKFKSYKYDGRSEEFYRLPYGLSRYFPSL 527          
BLAST of DN617676 vs. ExPASy Swiss-Prot
Match: NAT4_ARATH (Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 1.601e-20
Identity = 47/91 (51.65%), Postives = 59/91 (64.84%), Query Frame = -3
Query:  219 YFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 491
            YF EY  I+G GPVHT    FN ++ + FSS   V    AF LD T       VR+D GRHWW+KF  +  DTR+EEFY+LP+NLN++FPS
Sbjct:  435 YFTEYLFISGRGPVHTRTSAFNVIMQVIFSSAATVGIMAAFLLDCTHSYGHASVRRDSGRHWWEKFRVYHTDTRTEEFYALPYNLNRFFPS 525          
BLAST of DN617676 vs. ExPASy Swiss-Prot
Match: NAT1_ARATH (Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.498e-18
Identity = 42/90 (46.67%), Postives = 59/90 (65.56%), Query Frame = -3
Query:  222 YFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFP 491
            +F +Y     +G VHT+  WFN  +N  F S   V   +A F+DNT+  +  + +KDRG  WW KF +F+GD R+EEFY+LPFNLN++FP
Sbjct:  431 FFAQYWDARHYGLVHTNAGWFNAFLNTLFMSPATVGLIIAVFMDNTMEVE--RSKKDRGMPWWVKFRTFRGDNRNEEFYTLPFNLNRFFP 518          
BLAST of DN617676 vs. ExPASy Swiss-Prot
Match: NAT3_ARATH (Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.551e-15
Identity = 40/91 (43.96%), Postives = 54/91 (59.34%), Query Frame = -3
Query:  219 YFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 491
            YF   T+  G+GPV T+G WFND++N  F+S P VA  +A  LDNTL  +       RG  WW  F    GD R++EFYS+P  +N+  P+
Sbjct:  459 YFLANTSRAGYGPVRTAGGWFNDILNTIFASAPLVATILATILDNTLEARHAS-DDARGIPWWKPFQHRNGDGRNDEFYSMPLRINELMPT 548          
BLAST of DN617676 vs. ExPASy Swiss-Prot
Match: NAT10_ARATH (Putative nucleobase-ascorbate transporter 10 OS=Arabidopsis thaliana GN=NAT10 PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.714e-14
Identity = 39/91 (42.86%), Postives = 49/91 (53.85%), Query Frame = -3
Query:  219 YFNEYTAINGFGPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 491
            YF EY   NG         W  DM+ + F S   VA  +A  LD TL +   + +KD G  WWDKF  +  D R++EFY LP  LNK+FPS
Sbjct:  452 YFREY--YNGGWRSDHHSNWLEDMIRVIFMSHTTVAAIIAIVLDCTLCRDSDEAKKDCGMKWWDKFRLYNLDVRNDEFYGLPCRLNKFFPS 540          
The following BLAST results are available for this feature:
BLAST of DN617676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
NAT6_ARATH2.897e-4688.04Nucleobase-ascorbate transporter 6 OS=Arabidopsis ... [more]
NAT5_ARATH8.723e-4377.17Nucleobase-ascorbate transporter 5 OS=Arabidopsis ... [more]
NAT7_ARATH4.953e-3873.91Nucleobase-ascorbate transporter 7 OS=Arabidopsis ... [more]
NAT8_ARATH5.489e-2960.44Nucleobase-ascorbate transporter 8 OS=Arabidopsis ... [more]
NAT2_ARATH2.234e-2254.44Nucleobase-ascorbate transporter 2 OS=Arabidopsis ... [more]
LPE1_MAIZE9.385e-2153.26Nucleobase-ascorbate transporter LPE1 OS=Zea mays ... [more]
NAT4_ARATH1.601e-2051.65Nucleobase-ascorbate transporter 4 OS=Arabidopsis ... [more]
NAT1_ARATH1.498e-1846.67Nucleobase-ascorbate transporter 1 OS=Arabidopsis ... [more]
NAT3_ARATH1.551e-1543.96Nucleobase-ascorbate transporter 3 OS=Arabidopsis ... [more]
NAT10_ARATH1.714e-1442.86Putative nucleobase-ascorbate transporter 10 OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01I16_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001I16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617676 ID=DN617676; Name=DN617676; organism=Citrus sinensis; type=EST; length=493bp
ACTATCGAATCCATCAGTCTCCGGTTGGATTTACAGAAAAGAAAAAAACA
GTTCAACAAATGCTCTAAGGCACATCCTATAAAGGAAGGTACTATCTTTT
ACTGCTATAGCGTGTAATAAGAGATTCACAAGAGAGCAATGATGATATTT
TGTGTGTTCCCACAAGGACTTTTGGAAAACTTCCCAAAGAGCAATACATG
TTACCGATTGAATCACACAGATGGGAAATATTTGTTTAAATTGAAGGGCA
GGGAGTAAAATTCTTCACTTCTTGTGTCGCCTTTGAAGGACCAGAACTTG
TCCCACCAATGCCTACCCCTGTCTTTCCTGACTTGACCATCCTTTTTATG
CAGTGTGTTGTCGAGGAAAAATGCCACACAACCAGCAACAAATGGTTCTG
ACGAGAAAGGAATGTTTACCATATCGTTGAACCATCTTCCACTAGTGTGA
ACTGGACCGAAACCATTAATGGCAGTGTACTCATTGAAGTATT
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