DN617668

Overview
NameDN617668
Unique NameDN617668
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length675
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5741 contig Csv1_Contig5741:1..675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DN617668 vs. ExPASy Swiss-Prot
Match: FAR1_ARATH (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = -2 
Query:  495 SLQGLGQLNSIAPGHDGFFGAQQSMHGL-GQLDFRPPTSYSYGLQDESHLRQTQSHGNAPR 674
            ++QGLGQLNSIAP  D FF  QQ+M G+ GQ+DFRPP +++Y LQ+E HL   Q  G++ R
Sbjct:  766 TIQGLGQLNSIAPAQDSFFTNQQAMSGMVGQIDFRPPPNFTYTLQEE-HLSSAQLPGSSSR 825
The following BLAST results are available for this feature:
BLAST of DN617668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FAR1_ARATH5.982e-1155.74Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01I11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001I11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617668 ID=DN617668; Name=DN617668; organism=Citrus sinensis; type=EST; length=675bp
TTTTTTTCCAAATAAACATTTCTCCAACAGCTAAAAGAGGAATTCCGTGG
TAAAATTCATACTTAAGAAGAGTAGCGCCACAACTCCACAACATGGCGAT
GGACATACACATACAATAAGAAGAATACAAGAACATTTACGGAGATATAT
TACTACTGCCACTGAACATCACTGATTTGCACAGGACAAGTGCATTTCTT
AAATCAATTCCCATCCAAGCAAGAAATCTACACCTCAGAGAACAGGAGTC
TTGCTTTCCATGGCATCCGTTGTGGAGTTAAACTGGATCAACAGAACAGA
AGCAAAATGCTCCATGCGCTAAGTGAGACAATTGGGGTTGGAACAGCAAT
ATTCAATTCTAGTCAACGACTTCATGATTGAATAATTCCGCTCAACTTGA
TAACTATTTTTTGGCTGCCCCTGAAGGTGAAGCTTTAGCTATTCTTTTGC
AAGCTTCTAAATTGATAGATCACGGAGTTCCGTCTTTATGGATGCCTTGG
AGCATTACCATGTGACTGAGTTTGTCTCAAATGGGATTCGTCCTGCAGAC
CATAGCTGTAGCTAGTTGGAGGTCGGAAATCCAATTGTCCCAGCCCATGC
ATGCTCTGTTGAGCCCCAAAAAAACCATCATGCCCGGGTGCTATTGAGTT
CAACTGTCCCAGCCCCTGCAAGCTC
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