DN617666

Overview
NameDN617666
Unique NameDN617666
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9443 contig Csv1_Contig9443:178..842. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_ARATH (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Arabidopsis thaliana GN=HEMB PE=1 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 3.695e-82
Identity = 150/202 (74.26%), Postives = 162/202 (80.20%), Query Frame = 1
Query:   58 ASKSHDGTTKKLGISDAECEAAVVAGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRKSPAMRASFQETNLSPENFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            AS+S +G  KKLG+SDAECEAAV AGN+                              NR SP  RA+FQET++SP NFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKAR VGVNS+VLFPKVP+ALK+ TGDEAYNDNGLVPRTIRLLKD+YPDL+IYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA
Sbjct:   53 ASESGNGHAKKLGMSDAECEAAVAAGNVPEAPPVPPKPAAPVGTPIIKPLNLSRRPRRNRASPVTRAAFQETDISPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARAVGVNSIVLFPKVPEALKNSTGDEAYNDNGLVPRTIRLLKDKYPDLIIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 254          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_SOYBN (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Glycine max GN=HEMB PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 3.823e-79
Identity = 144/188 (76.60%), Postives = 155/188 (82.45%), Query Frame = 1
Query:  100 SDAECEAAVVAGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRKSPAMRASFQETNLSPENFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            SD+E EAAVVAG +                              NRKSPA+R++FQET++SP NFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLV+EVAKARDVGVNSVVLFPK+PDALKSPTGDEAYN+NGLVPRTIRLLKD+YPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA
Sbjct:   49 SDSEFEAAVVAGKVPPAPPVRPRPAAPVGTPVVPSLPLHRRPRRNRKSPALRSAFQETSISPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVEEVAKARDVGVNSVVLFPKIPDALKSPTGDEAYNENGLVPRTIRLLKDKYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 236          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_PEA (Delta-aminolevulinic acid dehydratase, chloroplastic (Fragment) OS=Pisum sativum GN=HEMB PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.041e-76
Identity = 138/188 (73.40%), Postives = 154/188 (81.91%), Query Frame = 1
Query:  100 SDAECEAAVVAGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRKSPAMRASFQETNLSPENFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            SD++ EAAVVAG +                              NR+SPA+R++FQET LSP NFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGL++EVAKARDVGVNSVVLFPK+PDALK+PTGDEAYN++GLVPR+IRLLKD+YPDL+IYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA
Sbjct:   35 SDSDFEAAVVAGKVPEAPPVPPTPASPAGTPVVPSLPIQRRPRRNRRSPALRSAFQETTLSPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLLEEVAKARDVGVNSVVLFPKIPDALKTPTGDEAYNEDGLVPRSIRLLKDKYPDLIIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 222          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_SPIOL (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Spinacia oleracea GN=HEMB PE=1 SV=2)

HSP 1 Score: 272.322 bits (695), Expect = 1.556e-72
Identity = 139/203 (68.47%), Postives = 152/203 (74.88%), Query Frame = 1
Query:   58 ASKSHDGTTK-KLGISDAECEAAVVAGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRKSPAMRASFQETNLSPENFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            AS+  D  T+ K G+S  ECEAAVVAGN                               NR SP  RA+FQET LSP N VYPLFIHEGEEDTPIGAMPGCYRLGWRHGLV+EVAKARDV VNS+V+FPK PDALKSPTGDEAYN+NGLVPRTIR+LKD++PDL+IYTDVALDPY  DGHDGIV + GVIMNDETVHQLCKQA
Sbjct:   56 ASERRDNLTQQKTGLSIEECEAAVVAGNAPSAPPVPPTPKAPSGTPSVSPLSLGRRPRRNRTSPVFRAAFQETTLSPANVVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVEEVAKARDVVVNSIVVFPK-PDALKSPTGDEAYNENGLVPRTIRMLKDKFPDLIIYTDVALDPYYYDGHDGIVTQHGVIMNDETVHQLCKQA 257          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_HORVU (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Hordeum vulgare GN=HEMB PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 5.534e-70
Identity = 129/190 (67.89%), Postives = 145/190 (76.32%), Query Frame = 1
Query:   94 GISDAECEAAVVAGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRKSPAMRASFQETNLSPENFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            G S  ECEA  VAG                                NR+SPA+RA+FQET++SP N V PLFIHEGEED PIGAMPGC+RLGW+HGL+ EV KARDVGVNS VLFPKVPDALKSPTG EAYNDNGLVPRTIRLLKD++PD+++YTDVALDPYSSDGHDGIVR+DGVI+NDETV+QLCKQA
Sbjct:   61 GRSIEECEADAVAGRFPAPSCVCQTPKAPDGTPEIRPLDMAKRPRRNRRSPALRAAFQETSISPANLVLPLFIHEGEEDAPIGAMPGCFRLGWQHGLLAEVYKARDVGVNSFVLFPKVPDALKSPTGVEAYNDNGLVPRTIRLLKDKFPDIIVYTDVALDPYSSDGHDGIVRKDGVILNDETVYQLCKQA 250          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_ORYSJ (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Oryza sativa subsp. japonica GN=HEMB PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 7.228e-70
Identity = 122/144 (84.72%), Postives = 135/144 (93.75%), Query Frame = 1
Query:  232 NRKSPAMRASFQETNLSPENFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            NR+SPA+RA+FQET +SP N V PLFIHEGE+D PIGAMPGCYRLGWRHGL+ EV K+RDVGVNS VLFPKVPDALKS +GDEAYNDNGLVPRTIRLLKD++PD+V+YTDVALDPYSSDGHDGIVREDGVIMNDETV+QLCKQA
Sbjct:  106 NRRSPALRAAFQETTISPANLVLPLFIHEGEDDAPIGAMPGCYRLGWRHGLLDEVYKSRDVGVNSFVLFPKVPDALKSQSGDEAYNDNGLVPRTIRLLKDKFPDIVVYTDVALDPYSSDGHDGIVREDGVIMNDETVYQLCKQA 249          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_SELMA (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Selaginella martensii GN=HEMB PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.610e-69
Identity = 130/185 (70.27%), Postives = 141/185 (76.22%), Query Frame = 1
Query:  109 ECEAAVVAGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRKSPAMRASFQETNLSPENFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            ECEA VV+GN                               NRKS A+R +FQET L+P NF+ PLFIHEGEED+PIGAMPGC RLGWRHGL+ EV KARDVGVNSVVLFPK+PDALKS TGDEAYN +GLVPR IR LKD++PDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA
Sbjct:   58 ECEADVVSGNPPAAPAAPAKAKAPPGTPVVKPLRLTSRPRRNRKSAALRDAFQETTLTPANFILPLFIHEGEEDSPIGAMPGCSRLGWRHGLIDEVYKARDVGVNSVVLFPKIPDALKSSTGDEAYNPDGLVPRAIRTLKDKFPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 242          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_PHYPA (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Physcomitrella patens GN=HEMB PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 8.835e-68
Identity = 129/185 (69.73%), Postives = 140/185 (75.68%), Query Frame = 1
Query:  109 ECEAAVVAGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRKSPAMRASFQETNLSPENFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            ECEA VVAGN                               NR+SPA+RA+FQET +SP NF+ PLF+HEGE++ PIGAMPGC RLGWRHGL+ EV KARDVGVNSVVLFPKVPDALKS TGDEAYN +GLVPR IRLLK   PDLVIYTDVALDPYSSDGHDGIVREDG+IMNDETVHQLCKQA
Sbjct:   72 ECEANVVAGNAPAAPPVPAKPSAPEGTPAISPLVMPARPRRNRRSPALRAAFQETTISPANFILPLFVHEGEQNAPIGAMPGCQRLGWRHGLIDEVYKARDVGVNSVVLFPKVPDALKSSTGDEAYNPDGLVPRCIRLLK-AIPDLVIYTDVALDPYSSDGHDGIVREDGLIMNDETVHQLCKQA 255          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_CHLRE (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Chlamydomonas reinhardtii GN=HEMB PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.373e-44
Identity = 85/145 (58.62%), Postives = 109/145 (75.17%), Query Frame = 1
Query:  232 NRKSPAMRASFQETNLSPENFVYPLFIHE-GEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            NR+S + RAS +E N+SP NF+ P+FIHE   ++ PI +MPG  RL +   ++  VA+ R  GVN VV+FPK PD LK+ T +EA+N NGL  RTIRLLKD +PDL +YTDVALDPY+SDGHDGIV + GVI+NDET+  LC+QA
Sbjct:   63 NRRSESFRASVREVNVSPANFILPIFIHEESNQNVPIASMPGINRLAYGKNVIDYVAEPRSYGVNQVVVFPKTPDHLKTQTAEEAFNKNGLSQRTIRLLKDSFPDLEVYTDVALDPYNSDGHDGIVSDAGVILNDETIEYLCRQA 207          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_CHLTE (Delta-aminolevulinic acid dehydratase OS=Chlorobium tepidum GN=hemB PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.131e-22
Identity = 63/146 (43.15%), Postives = 92/146 (63.01%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGE---EDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            R++ A+R   QE  L+  + V+PLF+  G    E+ P  +MPG +R       V+E  +  D+G+ ++ LF  +P+  K+  G EAYNDNG++ + IR +K   P+L I TDVALDP++  GHDG+VR DG+I+NDETV  L K A
Sbjct:   17 RRTAALRNLVQENTLTVNDLVFPLFVMPGTNAVEEVP--SMPGSFRFTIDRA-VEECKELYDLGIQAIDLFG-IPEK-KTEDGSEAYNDNGILQQAIRAIKKAVPELCIMTDVALDPFTPFGHDGLVR-DGIILNDETVEVLQKMA 156          
The following BLAST results are available for this feature:
BLAST of DN617666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
HEM2_ARATH3.695e-8274.26Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_SOYBN3.823e-7976.60Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_PEA1.041e-7673.40Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_SPIOL1.556e-7268.47Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_HORVU5.534e-7067.89Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_ORYSJ7.228e-7084.72Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_SELMA1.610e-6970.27Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_PHYPA8.835e-6869.73Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_CHLRE1.373e-4458.62Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_CHLTE1.131e-2243.15Delta-aminolevulinic acid dehydratase OS=Chlorobiu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01I10_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001I10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617666 ID=DN617666; Name=DN617666; organism=Citrus sinensis; type=EST; length=665bp
TTAAGGTTCAATTGCGTCAAAACGAAAACCGTAACGACACGTCGTTTGGT
TGTTACAGCAAGCAAATCGCACGATGGAACGACGAAGAAGCTTGGAATCA
GTGACGCTGAGTGTGAGGCGGCTGTTGTGGCGGGAAATATTCCAGAAGCG
CCTCCCGTGCCACCAAAGCCTGCCGCGCCAGCTGGAACTCCTGTAGTTCC
TTCTCTTCCACTTAGTCGGCGGCCTCGCCGTAATCGGAAGTCCCCCGCAA
TGAGAGCATCCTTCCAGGAAACAAATCTTTCACCGGAAAATTTTGTATAT
CCACTTTTTATTCATGAAGGAGAGGAGGACACGCCTATTGGGGCCATGCC
CGGTTGTTATAGACTTGGTTGGAGACATGGACTTGTTCAAGAGGTGGCGA
AAGCACGGGATGTTGGTGTGAATAGTGTTGTGCTCTTCCCCAAAGTTCCA
GATGCTTTGAAGTCTCCCACAGGAGATGAAGCATACAATGATAATGGTCT
GGTGCCTCGTACAATACGGCTGCTCAAGGATAGATACCCTGATCTTGTAA
TTTACACTGATGTTGCTTTAGATCCATATTCCTCTGATGGGCATGATGGT
ATTGTCAGAGAAGACGGAGTCATTATGAATGATGAAACAGTGCATCAATT
ATGTAAACAAGCTGT
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