DN617665

Overview
NameDN617665
Unique NameDN617665
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_ARATH (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Arabidopsis thaliana GN=HEMB PE=1 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 8.379e-68
Identity = 129/149 (86.58%), Postives = 138/149 (92.62%), Query Frame = -3
Query:  198 GFQHVSIMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCLCGEKR 644
            GFQ+VSIMSYTAKYASSFYGPFREAL+SNPRFGDKKTY +      ANYREAL+EA+ DE+EGADILLVKPGLPYLD+IRLLRDK PLPIAAYQVSGEYSMIKAGG LKMIDE++VMMESLMCLRRAGADIILTYFALQAA CLCGEKR
Sbjct:  286 GFQNVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNP----ANYREALIEAREDEAEGADILLVKPGLPYLDIIRLLRDKSPLPIAAYQVSGEYSMIKAGGVLKMIDEEKVMMESLMCLRRAGADIILTYFALQAATCLCGEKR 430          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_PEA (Delta-aminolevulinic acid dehydratase, chloroplastic (Fragment) OS=Pisum sativum GN=HEMB PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 4.159e-67
Identity = 129/149 (86.58%), Postives = 136/149 (91.28%), Query Frame = -3
Query:  198 GFQHVSIMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCLCGEKR 644
            GFQHVSIMSYTAKYASSFYGPFREAL+SNPRFGDKKTY +      ANYREAL E + DESEGADILLVKPGLPYLD+IRLLRD  PLPIAAYQVSGEYSMIKAGGALKMIDE++VMMESL+CLRRAGADIILTYFALQAAR LCGEKR
Sbjct:  254 GFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNP----ANYREALTEMREDESEGADILLVKPGLPYLDIIRLLRDNSPLPIAAYQVSGEYSMIKAGGALKMIDEEKVMMESLLCLRRAGADIILTYFALQAARTLCGEKR 398          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_SOYBN (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Glycine max GN=HEMB PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.210e-66
Identity = 128/149 (85.91%), Postives = 135/149 (90.60%), Query Frame = -3
Query:  198 GFQHVSIMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCLCGEKR 644
            GFQHVSIMSYTAKYASSFYGPFREAL+SNPRFGDKKTY +      ANYREAL E + DESEGADILLVKPGLPYLD+IRLLRD  PLPIAAYQVSGEY+MIKA GALKMIDE++VMMESLMCLRRAGADIILTY ALQAARCLCGEKR
Sbjct:  268 GFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNP----ANYREALTEMREDESEGADILLVKPGLPYLDIIRLLRDNSPLPIAAYQVSGEYAMIKAAGALKMIDEEKVMMESLMCLRRAGADIILTYSALQAARCLCGEKR 412          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_SPIOL (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Spinacia oleracea GN=HEMB PE=1 SV=2)

HSP 1 Score: 249.595 bits (636), Expect = 1.024e-65
Identity = 125/149 (83.89%), Postives = 135/149 (90.60%), Query Frame = -3
Query:  198 GFQHVSIMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCLCGEKR 644
            G+ +VSIMSYTAKYASSFYGPFREAL+SNPRFGDKKTY +      ANYREAL+E Q DESEGADILLVKPGLPYLD+IRLLRD   LPIAAYQVSGEYSMIKAGG LKMIDE++VM+ESL+CLRRAGADIILTYFALQAARCLCGEKR
Sbjct:  289 GYSNVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNP----ANYREALIETQEDESEGADILLVKPGLPYLDIIRLLRDNSDLPIAAYQVSGEYSMIKAGGVLKMIDEEKVMLESLLCLRRAGADIILTYFALQAARCLCGEKR 433          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_ORYSJ (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Oryza sativa subsp. japonica GN=HEMB PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.172e-61
Identity = 122/146 (83.56%), Postives = 128/146 (87.67%), Query Frame = -3
Query:  207 GFQHVSIMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCLCG 644
            GF  VSIMSYTAKYASSFYGPFREAL+SNPRFGDKKTY +      ANYREAL+E  ADE+EGADILLVKPGLPYLDVIRLLRD   LPIAAYQVSGEYSMIKAGGAL MIDE++VMMESLMCLRRAGADIILTYFA QAA  LCG
Sbjct:  281 GFHDVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNP----ANYREALLETAADEAEGADILLVKPGLPYLDVIRLLRDNSALPIAAYQVSGEYSMIKAGGALNMIDEEKVMMESLMCLRRAGADIILTYFARQAANVLCG 422          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_HORVU (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Hordeum vulgare GN=HEMB PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.871e-59
Identity = 117/146 (80.14%), Postives = 125/146 (85.62%), Query Frame = -3
Query:  207 GFQHVSIMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCLCG 644
            GF  VSIMSYTAKYASSFYGPFREAL+SNPRFGDKKTY +      ANYREAL+E  ADE+EGADILLVKPGLPYLD+IRL RD   LPIAAYQVSGEYSMIKAGGAL MIDE++VMMESLMCLRRAGAD+ILTYFA Q    LCG
Sbjct:  282 GFNDVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNP----ANYREALLETAADEAEGADILLVKPGLPYLDIIRLSRDNSALPIAAYQVSGEYSMIKAGGALNMIDEEKVMMESLMCLRRAGADVILTYFARQPPAVLCG 423          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_SELMA (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Selaginella martensii GN=HEMB PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.534e-53
Identity = 104/148 (70.27%), Postives = 123/148 (83.11%), Query Frame = -3
Query:  201 GFQHVSIMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCLCGEK 644
            G+ HVSIM+YTAKYAS+FY PFRE L+SNPRFGDKKTY +       NYREAL+E  ADESEGADIL+VKP +PYL VIRLLRD   LPI+AYQVSGEYSMIKA  +  M+DE++ ++ESL+C++RAGAD+ILTY ALQAAR LCGEK
Sbjct:  274 GYYHVSIMAYTAKYASAFYEPFREELDSNPRFGDKKTYQMNP----ENYREALLEVHADESEGADILMVKPAMPYLHVIRLLRDTSALPISAYQVSGEYSMIKAAASQGMLDEKKAILESLLCIKRAGADVILTYAALQAARWLCGEK 417          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_PHYPA (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Physcomitrella patens GN=HEMB PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.456e-51
Identity = 101/148 (68.24%), Postives = 124/148 (83.78%), Query Frame = -3
Query:  201 GFQHVSIMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCLCGEK 644
            G Q VSI++YTAKYAS+FYGP REAL+SNPRFGDKKTY +      ANYREAL+E + DE+EGADIL+VKP +PYLDVIRLLRD   LPI+AYQVSGEYSMI+A G   M+DE++ ++ESL+ +RRAGAD+ILTYFA+QAA+ LC E+
Sbjct:  287 GHQDVSIIAYTAKYASAFYGPSREALDSNPRFGDKKTYQMNP----ANYREALIETRMDEAEGADILMVKPAMPYLDVIRLLRDNTALPISAYQVSGEYSMIRA-GCRGMLDEKKAVLESLLSIRRAGADVILTYFAIQAAQWLCAER 429          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_CHLRE (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Chlamydomonas reinhardtii GN=HEMB PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.206e-43
Identity = 87/156 (55.77%), Postives = 118/156 (75.64%), Query Frame = -3
Query:  201 GFQHVSIMSYTAKYASSFYGPFREALESNPRFG--------DKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCLCGEK 644
            GF +VSIMSYTAKYAS++YGPFR+AL S P+ G        +KKTY +      ANYREA+ EA+ADE+EGADI++VKPG+PYLDV+RLLR+  PLP+A Y VSGEY+M+KA      ++E+  ++E++ C RRAG D+ILTY+ ++A++ L GEK
Sbjct:  239 GFTNVSIMSYTAKYASAYYGPFRDALASAPKPGQAHRRIPPNKKTYQMDP----ANYREAIREAKADEAEGADIMMVKPGMPYLDVVRLLRETSPLPVAVYHVSGEYAMLKAAAERGWLNEKDAVLEAMTCFRRAGGDLILTYYGIEASKWLAGEK 390          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_CHLP8 (Delta-aminolevulinic acid dehydratase OS=Chlorobaculum parvum (strain NCIB 8327) GN=hemB PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.660e-40
Identity = 81/140 (57.86%), Postives = 105/140 (75.00%), Query Frame = -3
Query:  213 VSIMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCL 632
            V I+SY AKYASSFYGPFR+AL S P+FGDK TY +      AN  EA+ E + D  EGADI++VKPGL YLD++   ++++ +P+A Y VSGEY+M+KA  A   IDE RVMMESL+C++RAGADII TY+A +AA+ L
Sbjct:  192 VGILSYAAKYASSFYGPFRDALHSAPQFGDKSTYQMNP----ANTEEAMKEVELDIVEGADIVMVKPGLAYLDIVWRTKERFDVPVAIYHVSGEYAMVKAAAAKGWIDEDRVMMESLLCMKRAGADIIFTYYAKEAAKKL 327          
The following BLAST results are available for this feature:
BLAST of DN617665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
HEM2_ARATH8.379e-6886.58Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_PEA4.159e-6786.58Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_SOYBN1.210e-6685.91Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_SPIOL1.024e-6583.89Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_ORYSJ1.172e-6183.56Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_HORVU1.871e-5980.14Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_SELMA1.534e-5370.27Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_PHYPA5.456e-5168.24Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_CHLRE3.206e-4355.77Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_CHLP85.660e-4057.86Delta-aminolevulinic acid dehydratase OS=Chlorobac... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01I10_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001I10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617665 ID=DN617665; Name=DN617665; organism=Citrus sinensis; type=EST; length=646bp
TTTTTTTTTTTTTTTTTGACGCAAACATAAATTTAAGCACATTATTTATT
TCATCTATTCAGAGAGCACACTGCAAACAAATTTTGAAAATTTCCTTCAA
AATTTCAAATTCATTTTTCAATGTTAAGTACTAAAAAGGATAGGGCTTCT
AGAGCTTTATCAAAACTAACAACGCCTTATTACTCTGACAGTTCTCACCT
CTTCTCACCACATAAACATCTAGCAGCTTGTAGAGCAAAATATGTGAGGA
TGATATCAGCACCAGCCCGTCGAAGGCACATCAAGGACTCCATCATAACC
CTCTGCTCATCAATCATTTTGAGAGCACCACCAGCCTTGATCATTGAGTA
TTCACCAGATACCTGATATGCAGCAATCGGCAGAGGATATTTATCCCTGA
GAAGCCTAATGACATCCAAATAAGGAAGACCCGGTTTCACCAAAAGGATG
TCAGCTCCTTCTGATTCGTCTGCTTGGGCTTCAACTAGAGCCTCTCTGTA
ATTTGCATATAATTCAATAACTCTAATCACATACGTCTTTTTATCTCCAA
AACGTGGATTTGACTCTAGTGCTTCCCGAAATGGACCATAAAATGAACTT
GCATATTTGGCTGTATAGGACATGATAGAAACATGCTGAAAACCTT
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