DN617664

Overview
NameDN617664
Unique NameDN617664
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5965 contig Csv1_Contig5965:44..814. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617664 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 3.994e-52
Identity = 121/222 (54.50%), Postives = 142/222 (63.96%), Query Frame = -3
Query:  115 GYWKATGADKPIGKPKTLCIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRS-PATKNNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIGFPELEEDRKPNINISRQEVALGMPPHQGSPAPMMNDLLHMDTSDSVPRLQ-TDSSCSEHVLSPEITCDKEVQSMPKWNDLGNALNDDYN--QFNFNYMDTNSFQDDPFGPQVQYQMDQLSPYQDLFMILQKPF 768
            GYWKATGADKPIG PK + IKKALVFYAGKAPKG KTNWIMHEYR A+V RS    KN+LRLDDWVLCR+YNKKG  E+  P      G   +EE  KP +     E+ +  PP Q S      +  + DTSDSVP+L  TDSSCSE V+SPE T   EVQS PKW D     ND+ N   F FNY+D     D+ FG       +Q+ P QD+FM +QKP+
Sbjct:   86 GYWKATGADKPIGLPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATERRGPPPPVVYGDEIMEE--KPKVT----EMVMPPPPQQTS------EFAYFDTSDSVPKLHTTDSSCSEQVVSPEFT--SEVQSEPKWKDWSAVSNDNNNTLDFGFNYIDAT--VDNAFGG--GGSSNQMFPLQDMFMYMQKPY 289          
BLAST of DN617664 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.920e-46
Identity = 114/226 (50.44%), Postives = 132/226 (58.41%), Query Frame = -3
Query:  115 GYWKATGADKPIGKPKTLCIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPAT--KNNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIGFPELEEDRKPNINISRQEVALGMPPHQGSPAPMMNDLLHMDTSDSVPRLQTDSSCSEHVLSPEITCDK--EVQSMPKWNDLGNAL---NDDYNQFNFNYMDTNSFQDDPFGPQVQYQ-MDQLSPYQDLFMILQKPF 768
            GYWKATGADKPIGKPKTL IKKALVFYAGKAPKGIKTNWIMHEYR ANV RS +T  KNNLRLDDWVLCR+YNKKG MEK+ P+  +           KP   +S                                   +DS CS HV+SP++TC    EV+S PKW +L +AL   NDD + F+         Q+D F PQ QYQ  D +  +QD F   QKPF
Sbjct:  129 GYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKGTMEKYLPAAAE-----------KPTEKMS----------------------------------TSDSRCSSHVISPDVTCSDNWEVESEPKWINLEDALEAFNDDTSMFS----SIGLLQNDAFVPQFQYQSSDFVDSFQDPFE--QKPF 303          
BLAST of DN617664 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.781e-43
Identity = 97/169 (57.40%), Postives = 111/169 (65.68%), Query Frame = -3
Query:  280 GYWKATGADKPIGKPKTLCIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIGFPEL--EEDRKPNINISRQEVALGMPPHQGS--PAPMMNDL--LHMDTSDSVPRLQTDSSCSEHVLSPEITCDKEVQSMPK 768
            GYWKATGADKP+G PK + IKKALVFYAGKAPKG KTNWIMHEYR A+V RS   KN+LRLDDWVLCR+YNKKG +EK   +   + G         RKP + ++    A+  PP Q      P   DL   +   SDS+PRL  DSSCSE VLSPE  C  EVQS PK
Sbjct:   88 GYWKATGADKPVGSPKPVAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGGLEKPPAAAVAAAGMVSSGGGVQRKPMVGVN---AAVSSPPEQKPVVAGPAFPDLAAYYDRPSDSMPRLHADSSCSEQVLSPEFAC--EVQSQPK 251          
BLAST of DN617664 vs. ExPASy Swiss-Prot
Match: NAC71_ORYSJ (NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.367e-34
Identity = 89/182 (48.90%), Postives = 105/182 (57.69%), Query Frame = -3
Query:  304 GYWKATGADKPIGKPKTLCIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATK-------NNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIGFPELEEDRKPNINISRQEVALGMPPHQGSPAPMM---------------NDLLHMDTS-----DSVPRLQTDSSCSEHVLSPEITCD 768
            GYWKATGADKP+G P+ + IKKALVFYAGK PKG+KTNWIMHEYR A+V RS A +       N LRLDDWVLCR+YNKKG +E++   D          ED KP    +    A G     G  A  M               +++L  D S     DS+PRL TDSS SEHVLSP  + D
Sbjct:   88 GYWKATGADKPVGSPRAVAIKKALVFYAGKPPKGVKTNWIMHEYRLADVDRSAAARKLSKSSHNALRLDDWVLCRIYNKKGVIERYDTVD--------AGEDVKP---AAAAAAAKGGRIGGGGGAAAMKVELSDYGFYDQEPESEMLCFDRSGSADRDSMPRLHTDSSGSEHVLSPSPSPD 258          
BLAST of DN617664 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.582e-24
Identity = 53/82 (64.63%), Postives = 65/82 (79.27%), Query Frame = -3
Query:  535 GYWKATGADKPI---GKPKTLCIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSP-ATKNNLRLDDWVLCRLYNKKGRMEK 768
            GYWKATGADKP+   G  +T+ IKKALVFY+GKAP+G+KT+WIMHEYR A+  R+P   K + +LD+WVLCRLYNKK   EK
Sbjct:  100 GYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNKKNNWEK 181          
BLAST of DN617664 vs. ExPASy Swiss-Prot
Match: NAC67_ORYSJ (NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.646e-21
Identity = 52/81 (64.20%), Postives = 57/81 (70.37%), Query Frame = -3
Query:  535 GYWKATGADKPI-GKPKTLCIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPAT--KNNLRLDDWVLCRLYNKKGRMEK 768
            GYWKATGADKP+    +T  IKKALVFY GK P+G+KT WIMHEYR A    + A      LRLDDWVLCRLYNKK   EK
Sbjct:   96 GYWKATGADKPVLHNGRTAGIKKALVFYHGKPPRGVKTEWIMHEYRLAKKGGAAAAAGAGALRLDDWVLCRLYNKKNEWEK 176          
BLAST of DN617664 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.265e-20
Identity = 47/82 (57.32%), Postives = 58/82 (70.73%), Query Frame = -3
Query:  553 GYWKATGADKPI-----GKPKTLCIKKALVFYAGKAPKGIKTNWIMHEYR-----PANVHRSPATKNNLRLDDWVLCRLYNK 768
            GYWKATG DKP+     G  K + +KKALVFY+GK PKG+K++WIMHEYR     P ++      KN+LRLDDWVLCR+Y K
Sbjct:   96 GYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKK 177          
BLAST of DN617664 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.212e-18
Identity = 43/76 (56.58%), Postives = 57/76 (75.00%), Query Frame = -3
Query:  547 GYWKATGADKPIGKPKT-LCIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKN-NLRLDDWVLCRLYNKKG 768
            GYWKATG DK I    + + +KKALVFY G+ PKGIKT+WIMHEYR  +  ++   +N ++RLD+WVLCR+Y K+G
Sbjct:   88 GYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKRG 163          
BLAST of DN617664 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.773e-18
Identity = 47/73 (64.38%), Postives = 52/73 (71.23%), Query Frame = -3
Query:  553 GYWKATGADKPI-GKPKTLCIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNK 768
            GYWKATG DK I    + + IKKALVFYAGKAPKG KTNWIMHEYR     RS  +    +LDDWVLCR+Y K
Sbjct:   93 GYWKATGTDKIITADGRRVGIKKALVFYAGKAPKGTKTNWIMHEYRLIEHSRSHGSS---KLDDWVLCRIYKK 162          
BLAST of DN617664 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.773e-18
Identity = 47/80 (58.75%), Postives = 57/80 (71.25%), Query Frame = -3
Query:  535 GYWKATGADKPIG-KPKTLCIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKN-NLRLDDWVLCRLYNKKGRMEK 768
            GYWKATG DK I  + + + IKKALVFY GKAPKG KTNWIMHEYR       P+ +N + +LDDWVLCR+Y K+   +K
Sbjct:   93 GYWKATGTDKVISTEGRRVGIKKALVFYIGKAPKGTKTNWIMHEYRLI----EPSRRNGSTKLDDWVLCRIYKKQTSAQK 168          
The following BLAST results are available for this feature:
BLAST of DN617664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
NAC2_ARATH3.994e-5254.50NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NA102_ARATH1.920e-4650.44NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC48_ORYSJ5.781e-4357.40NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NAC71_ORYSJ8.367e-3448.90NAC domain-containing protein 71 OS=Oryza sativa s... [more]
NAC68_ORYSJ1.582e-2464.63NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC67_ORYSJ3.646e-2164.20NAC domain-containing protein 67 OS=Oryza sativa s... [more]
NAC18_ARATH5.265e-2057.32NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NAC29_ARATH2.212e-1856.58NAC domain-containing protein 29 OS=Arabidopsis th... [more]
NAC72_ARATH3.773e-1864.38NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC55_ARATH3.773e-1858.75NAC domain-containing protein 55 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01I09_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001I09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617664 ID=DN617664; Name=DN617664; organism=Citrus sinensis; type=EST; length=770bp
TTTTTTTAAAAAAATTTCTTCTACAATCTTGCACGAATAAGAATGCCCTA
CAATTGTGGTTTACAAAAGGATTATATAATACAGGACCTAGCATACTACG
ATGTATTGAACTTAAAATGGCTTCTGCAGAATCATAAAAAGGTCTTGATA
GGGTGATAACTGATCCATCTGATACTGAACTTGCGGGCCAAAAGGGTCGT
CTTGGAAGCTATTAGTGTCCATGTAGTTGAAATTGAACTGATTATAATCA
TCATTCAAGGCATTGCCTAGATCATTCCATTTGGGCATACTTTGGACCTC
CTTATCGCACGTGATCTCCGGCGACAACACGTGCTCGGAGCAACTCGAAT
CCGTCTGCAACCGGGGCACCGAGTCCGACGTATCCATATGTAATAGGTCA
TTCATCATTGGCGCAGGCGATCCCTGATGTGGAGGCATTCCTAATGCTAC
CTCTTGACGTGAAATGTTAATATTTGGTTTCCGATCCTCCTCCAGTTCTG
GGAATCCAATTGATTTTTGATCGCTGGGGTAATGTTTTTCCATCCTCCCC
TTCTTGTTGTACAATCGACATAATACCCAATCGTCAAGCCTTAGGTTGTT
TTTGGTGGCGGGGGATCTGTGAACATTAGCAGGGCGATATTCATGCATAA
TCCAATTAGTTTTGATTCCTTTAGGCGCTTTTCCAGCGTAGAACACAAGC
GCCTTTTTTATACAAAGAGTCTTCGGCTTCCCAATGGGCTTGTCCGCTCC
GGTCGCCTTCCAGTATCCGG
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