DN617663

Overview
NameDN617663
Unique NameDN617663
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN617663_ssr73 microsatellite DN617663_ssr73:73..90. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5965 contig Csv1_Contig5965:572..1184. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617663 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 9.196e-82
Identity = 144/181 (79.56%), Postives = 158/181 (87.29%), Query Frame = 1
Query:   91 NQLIS*KMMKG------AELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPAT--KNNLRLDDWVLCRLYNKKGRMEKH 609
            N+++S +  +G      AEL LP GFRFHPTDEELV  YLCR+CA  PI+VP+IAEIDLYK++PWELPEMA YGEKEWYFFS RDRKYPNGSRPNRAAG+GYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYR ANV RS +T  KNNLRLDDWVLCR+YNKKG MEK+
Sbjct:   29 NRILSTRKQQGTFPKMKAELNLPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKGTMEKY 209          
BLAST of DN617663 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.201e-81
Identity = 137/165 (83.03%), Postives = 149/165 (90.30%), Query Frame = 1
Query:  112 MMKGAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKGRMEK 606
            M  G +L+LPPGFRFHPTDEELV HYLCR+CAGLPI+VPIIAEIDLYK+DPW+LP MA YGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKP+G PK + IKKALVFYAGKAPKG KTNWIMHEYR A+V RS   KN+LRLDDWVLCR+YNKKG +EK
Sbjct:    1 MSGGQDLQLPPGFRFHPTDEELVMHYLCRRCAGLPIAVPIIAEIDLYKFDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGSPKPVAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGGLEK 165          
BLAST of DN617663 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 286.96 bits (733), Expect = 5.222e-77
Identity = 134/160 (83.75%), Postives = 143/160 (89.38%), Query Frame = 1
Query:  130 LELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRS-PATKNNLRLDDWVLCRLYNKKGRMEK 606
            L+LPPGFRFHPTDEELV HYLCRKCA   I+VPIIAEIDLYKYDPWELP +A YGEKEWYFFSPRDRKYPNGSRPNR+AGSGYWKATGADKPIG PK +GIKKALVFYAGKAPKG KTNWIMHEYR A+V RS    KN+LRLDDWVLCR+YNKKG  E+
Sbjct:    5 LQLPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATER 164          
BLAST of DN617663 vs. ExPASy Swiss-Prot
Match: NAC71_ORYSJ (NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 5.404e-74
Identity = 123/170 (72.35%), Postives = 144/170 (84.71%), Query Frame = 1
Query:  121 GAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATK-------NNLRLDDWVLCRLYNKKGRMEKH 609
            G  L+LPPGFRFHPTD+ELV +YLCRKC GLP++ P+IAE+DLYK++PW+LPE A  GEKEWYFFSPRDRKYPNG RPNRAAG+GYWKATGADKP+G P+ + IKKALVFYAGK PKG+KTNWIMHEYR A+V RS A +       N LRLDDWVLCR+YNKKG +E++
Sbjct:    4 GGALQLPPGFRFHPTDDELVMYYLCRKCGGLPLAAPVIAEVDLYKFNPWDLPERAMGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPVGSPRAVAIKKALVFYAGKPPKGVKTNWIMHEYRLADVDRSAAARKLSKSSHNALRLDDWVLCRIYNKKGVIERY 173          
BLAST of DN617663 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.055e-69
Identity = 121/165 (73.33%), Postives = 138/165 (83.64%), Query Frame = 1
Query:  124 AELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI---GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSP-ATKNNLRLDDWVLCRLYNKKGRMEK 606
            AEL LPPGFRFHPTDEELV HYLCRK A  P+ VPIIAE+DLYK DPW+LPE A +G KEWYFF+PRDRKYPNGSRPNRAAG GYWKATGADKP+   G  +T+GIKKALVFY+GKAP+G+KT+WIMHEYR A+  R+P   K + +LD+WVLCRLYNKK   EK
Sbjct:   17 AELNLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGRKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNKKNNWEK 181          
BLAST of DN617663 vs. ExPASy Swiss-Prot
Match: NAC67_ORYSJ (NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.475e-63
Identity = 114/164 (69.51%), Postives = 128/164 (78.05%), Query Frame = 1
Query:  124 AELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPAT--KNNLRLDDWVLCRLYNKKGRMEK 606
            A+L LPPGFRFHPTDEELV HYLC + AG    VPIIAE+DLY++DPW+LP  A +G +EWYFF+PRDRKYPNGSRPNRAA SGYWKATGADKP+    +T GIKKALVFY GK P+G+KT WIMHEYR A    + A      LRLDDWVLCRLYNKK   EK
Sbjct:   13 ADLNLPPGFRFHPTDEELVAHYLCPRAAGRAAPVPIIAELDLYRHDPWDLPHRALFGRREWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPVLHNGRTAGIKKALVFYHGKPPRGVKTEWIMHEYRLAKKGGAAAAAGAGALRLDDWVLCRLYNKKNEWEK 176          
BLAST of DN617663 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 5.246e-61
Identity = 108/161 (67.08%), Postives = 127/161 (78.88%), Query Frame = 1
Query:  136 LPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI-----GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYR-----PANVHRSPATKNNLRLDDWVLCRLYNK 588
            LPPGFRFHPTDEELV HYL RK   +P+ V IIA++DLYK+DPWELP  A +GE+EWYFFSPRDRKYPNG+RPNRAA SGYWKATG DKP+     G  K +G+KKALVFY+GK PKG+K++WIMHEYR     P ++      KN+LRLDDWVLCR+Y K
Sbjct:   17 LPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKK 177          
BLAST of DN617663 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 1.993e-60
Identity = 111/163 (68.10%), Postives = 128/163 (78.53%), Query Frame = 1
Query:  124 AELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-KPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKN-NLRLDDWVLCRLYNKKGRMEK 606
            A+L LPPGFRF+PTDEEL+  YLCRK AG   S+ +IAEIDLYK+DPW LP  A +GEKEWYFFSPRDRKYPNGSRPNR AGSGYWKATG DK I  + + +GIKKALVFY GKAPKG KTNWIMHEYR       P+ +N + +LDDWVLCR+Y K+   +K
Sbjct:   10 AQLSLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYIGKAPKGTKTNWIMHEYRLI----EPSRRNGSTKLDDWVLCRIYKKQTSAQK 168          
BLAST of DN617663 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 3.400e-60
Identity = 109/156 (69.87%), Postives = 123/156 (78.85%), Query Frame = 1
Query:  124 AELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNK 588
            A+L LPPGFRF+PTDEEL+  YLCRK AG   S+ +I +IDLYK+DPW+LP  A +GEKEWYFFSPRDRKYPNGSRPNR AGSGYWKATG DK I    + +GIKKALVFYAGKAPKG KTNWIMHEYR     RS  +    +LDDWVLCR+Y K
Sbjct:   10 AQLSLPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYAGKAPKGTKTNWIMHEYRLIEHSRSHGSS---KLDDWVLCRIYKK 162          
BLAST of DN617663 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 3.400e-60
Identity = 110/162 (67.90%), Postives = 127/162 (78.40%), Query Frame = 1
Query:  127 ELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-KPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKN-NLRLDDWVLCRLYNKKGRMEK 606
            +L LPPGFRF+PTDEEL+  YLCRK AG   S+ +IAEIDLYK+DPW LP  A +GEKEWYFFSPRDRKYPNGSRPNR AGSGYWKATG DK I  + + +GIKKALVFY GKAPKG KTNWIMHEYR       P+ +N + +LDDWVLCR+Y K+   +K
Sbjct:   11 QLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLI----EPSRRNGSTKLDDWVLCRIYKKQSSAQK 168          
The following BLAST results are available for this feature:
BLAST of DN617663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NA102_ARATH9.196e-8279.56NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC48_ORYSJ1.201e-8183.03NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NAC2_ARATH5.222e-7783.75NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NAC71_ORYSJ5.404e-7472.35NAC domain-containing protein 71 OS=Oryza sativa s... [more]
NAC68_ORYSJ1.055e-6973.33NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC67_ORYSJ1.475e-6369.51NAC domain-containing protein 67 OS=Oryza sativa s... [more]
NAC18_ARATH5.246e-6167.08NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NAC55_ARATH1.993e-6068.10NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NAC72_ARATH3.400e-6069.87NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC19_ARATH3.400e-6067.90NAC domain-containing protein 19 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01I09_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001I09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617663 ID=DN617663; Name=DN617663; organism=Citrus sinensis; type=EST; length=613bp
AACCAGGAGCAAAACATATGAAAGACCAAGCGAGTGAGCGAGCAAGCGAG
CAAGCAGGAGAGCAAGCAAGAGAGAAGAAGAAGAAGAAGAAATCAATTAA
TTAGTTAGAAGATGATGAAGGGAGCAGAGCTAGAGTTACCGCCAGGTTTC
AGATTTCACCCGACAGACGAGGAGCTGGTGAATCACTATTTGTGTAGGAA
ATGTGCAGGGCTACCGATTTCTGTTCCTATTATTGCCGAGATTGATCTCT
ACAAATACGATCCTTGGGAGCTACCCGAAATGGCACGGTACGGCGAAAAG
GAGTGGTATTTCTTTTCTCCAAGGGACAGGAAATATCCAAACGGTTCAAG
GCCGAACCGGGCGGCCGGATCCGGATACTGGAAGGCGACCGGAGCGGACA
AGCCCATTGGGAAGCCGAAGACTCTTGGTATAAAAAAGGCGCTTGTGTTC
TACGCTGGAAAAGCGCCTAAAGGAATCAAAACTAATTGGATTATGCATGA
ATATCGCCCTGCTAATGTTCACAGATCCCCCGCCACCAAAAACAACCTAA
GGCTTGACGATTGGGTATTATGTCGATTGTACAACAAGAAGGGGAGGATG
GAAAAACATTACC
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