DN617662
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617662 vs. ExPASy Swiss-Prot
Match: ALIS3_ARATH (ALA-interacting subunit 3 OS=Arabidopsis thaliana GN=ALIS3 PE=1 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 2.077e-61 Identity = 113/139 (81.29%), Postives = 120/139 (86.33%), Query Frame = -1 Query: 223 WAKKFSPSNFQNGTLIGGAHLDESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGG 639 + K P NFQ G + GGA LD IPLS+QEDLIVWMRTAALPTFRKLYGKIE DLE D I V L NNYNTYSF+GKKKLVLSTTSWLGGKNDFLGIAYLTVGG+CF LAL+FTI+YLVKPRRLGDPSYLSWNRNPGG Sbjct: 210 FGNKVFPKNFQKGNITGGATLDPRIPLSEQEDLIVWMRTAALPTFRKLYGKIESDLEMGDTIHVKLNNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFILALAFTIMYLVKPRRLGDPSYLSWNRNPGG 348 HSP 2 Score: 22.7126 bits (47), Expect = 2.077e-61 Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = -3 Query: 620 DRDHKLGKEVFP 655 D++HK G +VFP Sbjct: 205 DKEHKFGNKVFP 216
BLAST of DN617662 vs. ExPASy Swiss-Prot
Match: ALIS1_ARATH (ALA-interacting subunit 1 OS=Arabidopsis thaliana GN=ALIS1 PE=1 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.262e-60 Identity = 110/139 (79.14%), Postives = 120/139 (86.33%), Query Frame = -1 Query: 223 WAKKFSPSNFQNGTLIGGAHLDESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGG 639 + K P NFQ G L GGA LD + PLS QEDLIVWMRTAALPTFRKLYGKIE DLE+ + I V L+NNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGG+CF LAL+FT++YLVKPRRLGDP+YLSWNR PGG Sbjct: 211 FGKNVFPKNFQKGNLTGGASLDPNKPLSDQEDLIVWMRTAALPTFRKLYGKIESDLEKGENIQVTLQNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFVLALAFTVMYLVKPRRLGDPTYLSWNRIPGG 349 HSP 2 Score: 24.2534 bits (51), Expect = 2.262e-60 Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = -3 Query: 620 DRDHKLGKEVFP 655 D++HK GK VFP Sbjct: 206 DKEHKFGKNVFP 217
BLAST of DN617662 vs. ExPASy Swiss-Prot
Match: ALIS4_ARATH (Putative ALA-interacting subunit 4 OS=Arabidopsis thaliana GN=ALIS4 PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.210e-58 Identity = 104/141 (73.76%), Postives = 122/141 (86.52%), Query Frame = -1 Query: 223 TSWAKKFSPSNFQNGTLIGGAHLDESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGG 645 + + K P NFQ G+LIGG LD+ IPLS+QEDLIVWMRTAALPTFRKLYGKI+ DL+ D I V+L+NNYNTYSF+GKKKLVLSTTSWLGG+NDFLGIAYLTVG +C FLA+SF+++YL KPR+LGDPSYLSWNR+ GG Sbjct: 211 SKFGKNVFPKNFQKGSLIGGKSLDQDIPLSEQEDLIVWMRTAALPTFRKLYGKIDTDLQAGDTIKVLLQNNYNTYSFNGKKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVSFSVLYLAKPRQLGDPSYLSWNRSAGG 351 HSP 2 Score: 21.9422 bits (45), Expect = 1.210e-58 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = -3 Query: 620 DRDHKLGKEVFP 655 DR+ K GK VFP Sbjct: 208 DRESKFGKNVFP 219
BLAST of DN617662 vs. ExPASy Swiss-Prot
Match: ALIS5_ARATH (ALA-interacting subunit 5 OS=Arabidopsis thaliana GN=ALIS5 PE=1 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 5.396e-56 Identity = 102/139 (73.38%), Postives = 117/139 (84.17%), Query Frame = -1 Query: 223 WAKKFSPSNFQNGTLIGGAHLDESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGG 639 + K P NFQ G IGG L+ S PLS+QEDLIVWMRTAALPTFRKLYGKIE DL D I V+L+NNYNTYSF+G+KKLVLSTTSWLGG+NDFLGIAYLTVG +C FLA++F ++YLVKPR+LGDPSYLSWNR+ GG Sbjct: 210 FGKNVFPKNFQKGAPIGGGTLNISKPLSEQEDLIVWMRTAALPTFRKLYGKIETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVTFAVLYLVKPRQLGDPSYLSWNRSAGG 348 HSP 2 Score: 22.7126 bits (47), Expect = 5.396e-56 Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = -3 Query: 620 DRDHKLGKEVFP 655 DR++K GK VFP Sbjct: 205 DRENKFGKNVFP 216
BLAST of DN617662 vs. ExPASy Swiss-Prot
Match: ALIS2_ARATH (Putative ALA-interacting subunit 2 OS=Arabidopsis thaliana GN=ALIS2 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.531e-42 Identity = 82/135 (60.74%), Postives = 100/135 (74.07%), Query Frame = -1 Query: 235 WAKKFSPSNFQNGTLIGGAHLDESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNR 639 + K P NFQNGTLIGGA LD IPLS QED IVWMR AAL +FRKLYG+IE DLE +++V L NNYNTYSFSG+KKL+LST++WLGG+NDFLGI YL VG +++ F +++L PR GD SWN+ Sbjct: 207 FGKNVYPINFQNGTLIGGAKLDPKIPLSDQEDFIVWMRAAALLSFRKLYGRIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGRNDFLGITYLVVGSSSIVISIIFMLLHLKNPRPYGDN---SWNK 338 HSP 2 Score: 24.2534 bits (51), Expect = 4.531e-42 Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = -3 Query: 620 DRDHKLGKEVFP 655 DR+HK GK V+P Sbjct: 202 DREHKFGKNVYP 213
BLAST of DN617662 vs. ExPASy Swiss-Prot
Match: YNI7_SCHPO (Uncharacterized protein C11B10.07c OS=Schizosaccharomyces pombe GN=SPBC11B10.07c PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.733e-21 Identity = 57/137 (41.61%), Postives = 79/137 (57.66%), Query Frame = -1 Query: 235 SWAKKFSPSNFQNGTLIGGAHLDESIP-LSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNR 642 +WAK F NG + D++IP +S + +WMR AALPTF KL + + I ++ + N+ + G K ++ STTS +GGKN FLGI Y +GGLC + +I L+KPRR+GDP YLSWNR Sbjct: 242 NWAKMFP-----NG------YTDDNIPDVSTWDAFQIWMRAAALPTFSKLALRNVTTALQPGIYEMNITYNFPVTEYKGTKTIMFSTTSVIGGKNYFLGILYFVIGGLCAASGVILSIACLIKPRRVGDPRYLSWNR 367
BLAST of DN617662 vs. ExPASy Swiss-Prot
Match: CC50A_CHICK (Cell cycle control protein 50A OS=Gallus gallus GN=TMEM30A PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.953e-21 Identity = 49/93 (52.69%), Postives = 63/93 (67.74%), Query Frame = -1 Query: 286 EDLIVWMRTAALPTFRKLYGKIEVDLEENDIID-----VILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVY 549 ED IVWMRTAALPTFRKLY IE + + + NY +SF G+K+++LST SW+GGKN FLGIAY+TVG +CFFL + I++ Sbjct: 266 EDFIVWMRTAALPTFRKLYRLIERKSNLQPTLQAGKYSLNITYNYPVHSFDGRKRMILSTISWMGGKNPFLGIAYITVGSICFFLGVVLLIIH 358
BLAST of DN617662 vs. ExPASy Swiss-Prot
Match: CC50A_MOUSE (Cell cycle control protein 50A OS=Mus musculus GN=Tmem30a PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.722e-19 Identity = 49/104 (47.12%), Postives = 65/104 (62.50%), Query Frame = -1 Query: 289 DESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVI--------LENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIV 576 DES ED IVWMRTAALPTFRKLY IE +D+ + + NY +SF G+K+++LST SW+GGKN FLGIAY+T+G + F L + ++ Sbjct: 249 DESNNGFINEDFIVWMRTAALPTFRKLYRLIE---RRDDLHPTLPAGQYFLNITYNYPVHSFDGRKRMILSTISWMGGKNPFLGIAYITIGSISFLLGVVLLVI 349
BLAST of DN617662 vs. ExPASy Swiss-Prot
Match: MUG89_SCHPO (Meiotically up-regulated gene 89 protein OS=Schizosaccharomyces pombe GN=mug89 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.658e-18 Identity = 49/108 (45.37%), Postives = 66/108 (61.11%), Query Frame = -1 Query: 238 LSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWN 561 LS E+L VWMRTA LPTF KL + + D ++ + + SF G K LVL+T S LGGKN FLGIAY+ V +C L FT+ + ++PR+L D YL+W+ Sbjct: 275 LSTMENLQVWMRTAGLPTFSKLAMRNDNDDIFPGTYEIKIGLFFPVKSFDGTKSLVLTTRSVLGGKNPFLGIAYIVVSAVCVVLGTVFTLRHFIRPRKLADHRYLNWD 382
BLAST of DN617662 vs. ExPASy Swiss-Prot
Match: CC50A_RAT (Cell cycle control protein 50A OS=Rattus norvegicus GN=Tmem30a PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.301e-18 Identity = 47/101 (46.53%), Postives = 64/101 (63.37%), Query Frame = -1 Query: 289 DESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIID-----VILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIV 576 DES ED IVWMRTAALPTFRKLY IE + + + + + NY + F G+K+++LST SW+GGKN FLGIAY+T+G + F L + ++ Sbjct: 213 DESNNGFINEDFIVWMRTAALPTFRKLYRLIERTDDLHPTLPAGQYYLNITYNYPVHFFDGRKRMILSTISWMGGKNPFLGIAYITIGSISFLLGVVLLVI 313 The following BLAST results are available for this feature:
BLAST of DN617662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617662 ID=DN617662; Name=DN617662; organism=Citrus sinensis; type=EST; length=657bpback to top |