DN617657
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617657 vs. ExPASy Swiss-Prot
Match: HM13_HUMAN (Minor histocompatibility antigen H13 OS=Homo sapiens GN=HM13 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.807e-26 Identity = 69/141 (48.94%), Postives = 92/141 (65.25%), Query Frame = -2 Query: 263 KSFDAPIKLLFPTRDT------ARPFSMLGLGDIVIPGIFVALALRFDVSRGKGSR-YFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWNGEVKQLLEFDESK----TAAVVSQESSDAKTSKKVE 652 KSF+APIKL+FP +D A F+MLGLGD+VIPGIF+AL LRFD+S K + YF ++F Y GL LTI +M+ F+ AQPALLY+VPA IGF + GEV ++ ++ES A S+E ++A SK +E Sbjct: 234 KSFEAPIKLVFP-QDLLEKGLEANNFAMLGLGDVVIPGIFIALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALAKGEVTEMFSYEESNPKDPAAVTESKEGTEASASKGLE 373
BLAST of DN617657 vs. ExPASy Swiss-Prot
Match: HM13_MOUSE (Minor histocompatibility antigen H13 OS=Mus musculus GN=Hm13 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.167e-26 Identity = 69/142 (48.59%), Postives = 92/142 (64.79%), Query Frame = -2 Query: 263 KSFDAPIKLLFPTRDT------ARPFSMLGLGDIVIPGIFVALALRFDVSRGKGSR-YFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWNGEVKQLLEFDESK-----TAAVVSQESSDAKTSKKVE 652 KSF+APIKL+FP +D A F+MLGLGDIVIPGIF+AL LRFD+S K + YF ++F Y GL LTI +M+ F+ AQPALLY+VPA IGF + GEV ++ ++ES +ES++A SK++E Sbjct: 234 KSFEAPIKLVFP-QDLLEKGLEADNFAMLGLGDIVIPGIFIALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALAKGEVAEMFSYEESNPKDPAAETESKEESTEASASKRLE 374
BLAST of DN617657 vs. ExPASy Swiss-Prot
Match: IMP2_CAEEL (Intramembrane protease 2 OS=Caenorhabditis elegans GN=imp-2 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.633e-16 Identity = 56/130 (43.08%), Postives = 69/130 (53.08%), Query Frame = -2 Query: 320 KSFDAPIKLLFPTRD------TARPFSMLGLGDIVIPGIFVALALRFD-----------VSRG--KGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWNGEVKQLLEFDESK 652 K DAPI L FP A SMLGLGDIVIPGIF+AL RFD +G KG YF + Y GL +T+ VM+ F+AAQPALLY+VP + + GE+ L +DES+ Sbjct: 321 KGIDAPILLQFPQDIYRNGIMEASKHSMLGLGDIVIPGIFIALLRRFDYRVVQTTAESKAPQGSLKGRYYFVVTVVAYMAGLFITMAVMHHFKAAQPALLYLVPCCLFVPLLLAVIRGELSALWNYDESR 450
BLAST of DN617657 vs. ExPASy Swiss-Prot
Match: YL8H_SCHPO (Probable intramembrane protease C25B8.17 OS=Schizosaccharomyces pombe GN=SPAC25B8.17 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.172e-14 Identity = 45/112 (40.18%), Postives = 61/112 (54.46%), Query Frame = -2 Query: 332 DAPIKLLFPTRDTARPFSMLGLGDIVIPGIFVALALRFDV--------SRGKGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWNGEVKQLLEF 643 D P K + P SMLGLGDIV+PG+ +AL RFD+ K S YF++ F+ Y +GL +T + +F+AAQPALLY+ PA I + E+K L F Sbjct: 167 DIPAKYVLPQFKNPTRLSMLGLGDIVMPGLMLALMYRFDLHYYINSTSQPKKHSTYFRNTFIAYGLGLGVTNFALYYFKAAQPALLYLSPACIVAPLLTAWYRDELKTLFSF 278
BLAST of DN617657 vs. ExPASy Swiss-Prot
Match: YKK0_YEAST (Probable intramembrane protease YKL100C OS=Saccharomyces cerevisiae GN=YKL100C PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.087e-13 Identity = 47/146 (32.19%), Postives = 77/146 (52.74%), Query Frame = -2 Query: 290 SFDAPIKLLFPTR-DTARP---FSMLGLGDIVIPGIFVALALRFDVSR---------------GKGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWNGEVKQL-------LEFDESKTAAVVSQESS 649 + D P+KL P + +TA+ FS+LGLGDI +PG+F+A+ ++D+ + +YF +A + Y LV ++ ++ F AQPALLYIVP+++ WN + KQ +E D+S A+ +E+S Sbjct: 382 NLDIPVKLSLPVKFNTAQNNFNFSILGLGDIALPGMFIAMCYKYDIWKWHLDHDDTEFHFLNWSYVGKYFITAMVSYVASLVSAMVSLSIFNTAQPALLYIVPSLLISTILVACWNKDFKQFWNFQYDTIEVDKSLKKAIEKKENS 527
BLAST of DN617657 vs. ExPASy Swiss-Prot
Match: PSL1_HUMAN (Signal peptide peptidase-like 2B OS=Homo sapiens GN=SPPL2B PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.725e-13 Identity = 35/84 (41.67%), Postives = 50/84 (59.52%), Query Frame = -2 Query: 350 RPFSMLGLGDIVIPGIFVALALRFDVSRGKGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWNGEV 601 RPFS+LG GDI++PG+ VA RFD+ YF + + Y VGL++T + + Q QPALLY+VP + A +W E+ Sbjct: 412 RPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRVYFVACTIAYGVGLLVTFVALALMQRGQPALLYLVPCTLVTSCAVALWRREL 495
BLAST of DN617657 vs. ExPASy Swiss-Prot
Match: PSL1_CHICK (Signal peptide peptidase-like 2B OS=Gallus gallus GN=SPPL2B PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.766e-12 Identity = 33/84 (39.29%), Postives = 50/84 (59.52%), Query Frame = -2 Query: 350 RPFSMLGLGDIVIPGIFVALALRFDVSRGKGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWNGEV 601 RPFS+LG GDI++PG+ VA RFD+ YF + + Y +GL++T + + Q QPALLY+VP + + +W E+ Sbjct: 408 RPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRVYFVACTIAYGIGLLVTFVALALMQMGQPALLYLVPCTLITSFSVALWRKEL 491
BLAST of DN617657 vs. ExPASy Swiss-Prot
Match: PSL1_MOUSE (Signal peptide peptidase-like 2B OS=Mus musculus GN=Sppl2b PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.307e-12 Identity = 37/102 (36.27%), Postives = 56/102 (54.90%), Query Frame = -2 Query: 350 PIKLLFPTRDTA------RPFSMLGLGDIVIPGIFVALALRFDVSRGKGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWNGEV 637 P+ L P +T+ RPFS+LG GDI++PG+ VA RFD+ YF + + Y +GL++T + + Q QPALLY+VP + +W E+ Sbjct: 387 PMVLKVPRLNTSPLSLCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRIYFVACTIAYGLGLLVTFVALVLMQRGQPALLYLVPCTLLTSCTVALWRREL 488
BLAST of DN617657 vs. ExPASy Swiss-Prot
Match: PSL2_HUMAN (Signal peptide peptidase-like 2A OS=Homo sapiens GN=SPPL2A PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.013e-12 Identity = 30/70 (42.86%), Postives = 46/70 (65.71%), Query Frame = -2 Query: 389 PFSMLGLGDIVIPGIFVALALRFDVSRGKGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVI 598 P S+LG GDI++PG+ +A RFDV G Y+ S+ + Y +G++LT +V+ + QPALLY+VP + Sbjct: 404 PVSILGFGDIIVPGLLIAYCRRFDVQTGSSYIYYVSSTVAYAIGMILTFVVLVLMKKGQPALLYLVPCTL 473
BLAST of DN617657 vs. ExPASy Swiss-Prot
Match: PSL1_RAT (Signal peptide peptidase-like 2B OS=Rattus norvegicus GN=Sppl2b PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.767e-12 Identity = 36/102 (35.29%), Postives = 56/102 (54.90%), Query Frame = -2 Query: 350 PIKLLFPTRDTA------RPFSMLGLGDIVIPGIFVALALRFDVSRGKGSRYFKSAFLGYTVGLVLTIIVMNWFQAAQPALLYIVPAVIGFLAAHCIWNGEV 637 P+ L P +T+ RPFS+LG GDI++PG+ VA RFD+ YF + + Y +GL++T + + + QPALLY+VP + +W E+ Sbjct: 387 PMVLKVPRLNTSPLSLCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRIYFVACTIAYGLGLLVTFVALVLMRHGQPALLYLVPCTLLTSCTVALWRREM 488 The following BLAST results are available for this feature:
BLAST of DN617657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617657 ID=DN617657; Name=DN617657; organism=Citrus sinensis; type=EST; length=653bpback to top |