DN617646
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617646 vs. ExPASy Swiss-Prot
Match: SLSG3_BRAOL (S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 2.384e-34 Identity = 72/137 (52.55%), Postives = 96/137 (70.07%), Query Frame = 3 Query: 216 AISVDTLTATQNLT--NGKTLVSSDDVFELGFFSPGSSGKWYIGIWYKNIAQRTYVWVANRDNPLANSSGVLRIINQRIGLFDGSQNLVWSSNQTKATN---PVAQLQDSGNFVLKEAGSD---EILWQSFDYPTDT 602 A S++TL++T++LT + +TLVS +VFELGFF SS +WY+GIWYK RTYVWVANRDNPL+N G L+I + L D S VWS+N T+ VA+L D+GNFV++++ S+ + LWQSFDYPTDT Sbjct: 29 AFSINTLSSTESLTISSNRTLVSPGNVFELGFFKTTSSSRWYLGIWYKKFPYRTYVWVANRDNPLSNDIGTLKISGNNLVLLDHSNKSVWSTNVTRGNERSPVVAELLDNGNFVMRDSNSNNASQFLWQSFDYPTDT 165
BLAST of DN617646 vs. ExPASy Swiss-Prot
Match: SLSG2_BRAOA (S-locus-specific glycoprotein BS29-2 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.914e-32 Identity = 68/137 (49.64%), Postives = 96/137 (70.07%), Query Frame = 3 Query: 216 AISVDTLTATQNL--TNGKTLVSSDDVFELGFFSPGSSGKWYIGIWYKNIAQRTYVWVANRDNPLANSSGVLRIINQRIGLFDGSQNLVWSSNQTKATN---PVAQLQDSGNFVLKEAGSDE---ILWQSFDYPTDT 602 A S++TL++ ++L +N +TLVS +V ELGFF SS +WY+G+WYK +++RTYVWVANRDNPL+ S G L+I N + L D S +WS+N T+ VA+L +GNFVL+++ ++ LWQSFDYPTDT Sbjct: 28 AFSINTLSSIESLKISNSRTLVSPGNVLELGFFRTPSSSRWYLGMWYKKLSERTYVWVANRDNPLSCSIGTLKISNMNLVLLDHSNKSLWSTNHTRGNERSPVVAELLANGNFVLRDSNKNDRSGFLWQSFDYPTDT 164
BLAST of DN617646 vs. ExPASy Swiss-Prot
Match: SLSG6_BRAOL (S-locus-specific glycoprotein S6 OS=Brassica oleracea GN=SLSG PE=2 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 1.107e-31 Identity = 67/137 (48.91%), Postives = 95/137 (69.34%), Query Frame = 3 Query: 216 AISVDTLTATQNL--TNGKTLVSSDDVFELGFFSPGSSGKWYIGIWYKNIAQRTYVWVANRDNPLANSSGVLRIINQRIGLFDGSQNLVWSSNQTKATN---PVAQLQDSGNFVLKEAGSD---EILWQSFDYPTDT 602 A S++TL++T++L ++ +TLVS + FELGFF SS +WY+GIWYK + RTYVWVANRDNPL+N+ G L+I + L + VWS+N T+ VA+L +GNFV++++ ++ E LWQSFDYPTDT Sbjct: 29 AFSINTLSSTESLRISSNRTLVSPGNNFELGFFRTNSSSRWYLGIWYKKLLDRTYVWVANRDNPLSNAIGTLKISGNNLVLLGHTNKSVWSTNLTRGNERLPVVAELLSNGNFVMRDSSNNDASEYLWQSFDYPTDT 165
BLAST of DN617646 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.222e-31 Identity = 67/140 (47.86%), Postives = 97/140 (69.29%), Query Frame = 3 Query: 207 PTIAISVDTLTATQNLT--NGKTLVSSDDVFELGFFSPGSSGKWYIGIWYKNIAQRTYVWVANRDNPLANSSGVLRIINQRIGLFDGSQNLVWSSNQTKATN---PVAQLQDSGNFVLKEAGSD---EILWQSFDYPTDT 602 P ++I ++TL++T++LT + KTLVS +FE+GFF S +WY+G+WYK ++ RTYVWVANRDNPL+N+ G L+I + L D S VW +N T+ VA+L +GNFV++++ ++ E LWQSFDYPTDT Sbjct: 27 PALSIYINTLSSTESLTISSNKTLVSPGSIFEVGFFRTNS--RWYLGMWYKKVSDRTYVWVANRDNPLSNAIGTLKISGNNLVLLDHSNKPVWWTNLTRGNERSPVVAELLANGNFVMRDSSNNDASEYLWQSFDYPTDT 164
BLAST of DN617646 vs. ExPASy Swiss-Prot
Match: SLSG4_BRAOL (S-locus-specific glycoprotein S14 (Fragment) OS=Brassica oleracea GN=SLSG PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.727e-30 Identity = 65/137 (47.45%), Postives = 94/137 (68.61%), Query Frame = 3 Query: 216 AISVDTLTATQNLT--NGKTLVSSDDVFELGFFSPGSSGKWYIGIWYKNIAQRTYVWVANRDNPLANSSGVLRIINQRIGLFDGSQNLVWSSNQTKATN---PVAQLQDSGNFVLKEAGSDE---ILWQSFDYPTDT 602 A +++TL++ ++LT + +TLVS +VFELGFF SS +WY+GIWYK ++ RTYVWVANRDNPL++S G L+I D S VWS+N T+ VA + +GNFV++++ +++ LWQSFD+PTDT Sbjct: 26 AFTINTLSSIESLTISSNRTLVSPGNVFELGFFRTNSSSRWYLGIWYKKVSDRTYVWVANRDNPLSSSIGTLKISGNNPCHLDHSNKSVWSTNLTRGNERSPVVADVLANGNFVMRDSNNNDASGFLWQSFDFPTDT 162
BLAST of DN617646 vs. ExPASy Swiss-Prot
Match: SLSG1_BRAOA (S-locus-specific glycoprotein BS29-1 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.267e-27 Identity = 75/161 (46.58%), Postives = 96/161 (59.63%), Query Frame = 3 Query: 162 HPCYTNXXXXXXXXXPTIAISVDTLTATQNLT--NGKTLVSSDDVFELGFF------SPGSSGKWYIGIWYKNIA-QRTYVWVANRDNPLANSSGVLRIINQRIGLFDGSQNLVWSSNQTKATN-PV-AQLQDSGNFVLKEAGS---DEILWQSFDYPTDT 602 H YT P + S +TL+ + LT + KTLVS DVFELGFF SP + +WY+GIWYK + RTYVWVANRDN L NS G L+I + + L D S VWS+N T + PV A+L +GNFVL+++ + D +WQSFDYP DT Sbjct: 9 HHSYTLLFFVILVLFPHV-FSTNTLSPNEALTISSNKTLVSPGDVFELGFFKTTTRNSPDGTDRWYLGIWYKTTSGHRTYVWVANRDNALHNSMGTLKISHASLVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLRDSKTTALDRFMWQSFDYPVDT 168
BLAST of DN617646 vs. ExPASy Swiss-Prot
Match: SLSG0_BRAOA (S-locus-specific glycoprotein OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.267e-27 Identity = 75/161 (46.58%), Postives = 96/161 (59.63%), Query Frame = 3 Query: 162 HPCYTNXXXXXXXXXPTIAISVDTLTATQNLT--NGKTLVSSDDVFELGFF------SPGSSGKWYIGIWYKNIA-QRTYVWVANRDNPLANSSGVLRIINQRIGLFDGSQNLVWSSNQTKATN-PV-AQLQDSGNFVLKEAGS---DEILWQSFDYPTDT 602 H YT P + S +TL+ + LT + KTLVS DVFELGFF SP + +WY+GIWYK + RTYVWVANRDN L NS G L+I + + L D S VWS+N T + PV A+L +GNFVL+++ + D +WQSFDYP DT Sbjct: 9 HHSYTLFFFVILVLFPHV-FSTNTLSPNEALTISSNKTLVSPGDVFELGFFKTTTRNSPDGTDRWYLGIWYKTTSGHRTYVWVANRDNALHNSMGTLKISHASLVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLRDSKTNDLDRFMWQSFDYPVDT 168 The following BLAST results are available for this feature:
BLAST of DN617646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617646 ID=DN617646; Name=DN617646; organism=Citrus sinensis; type=EST; length=603bpback to top |