DN617645

Overview
NameDN617645
Unique NameDN617645
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN617645_ssr301 microsatellite DN617645_ssr301:301..312. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.393e-33
Identity = 74/135 (54.81%), Postives = 95/135 (70.37%), Query Frame = -1
Query:   47 FSFGVLLLETVSGKKNRGFYHSNNELNLLGHVWRLWKEGKVLEMVD----SSVDNYPA----NEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGFCLGRNPIETDSSSS---KHDETFTVNQ 418
            FSFGV++LE VSGKKNRGFY+ + E +LL +VW  WKEG+ LE+VD     S+ + P+     EVL+CI +GLLCVQE AE RP M+SVV M  SE   +PQPK PG+C+ R+P E D SSS     +E++TVNQ
Sbjct:  714 FSFGVIVLEIVSGKKNRGFYNLDYENDLLSYVWSRWKEGRALEIVDPVIVDSLSSQPSIFQPQEVLKCIQIGLLCVQELAEHRPAMSSVVWMFGSEATEIPQPKPPGYCVRRSPYELDPSSSWQCDENESWTVNQ 848          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 1.220e-29
Identity = 58/118 (49.15%), Postives = 88/118 (74.58%), Query Frame = -1
Query:   80 FSFGVLLLETVSGKKNRGFYHSNNELNLLGHVWRLWKEGKVLEMVDSS-VDNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGFC----LGRNPIETDSSS 418
            +SFGVL+LE +SGKKN  FY ++   +L+ + W LW  G+ LE+VD + V+N   NEV+RC+H+GLLCVQE+  ERPT++++VLML+S T T+P P+ PG      +G++P++TD++S
Sbjct:  523 YSFGVLVLEIISGKKNSSFYQTDGAHDLVSYAWGLWSNGRPLELVDPAIVENCQRNEVVRCVHIGLLCVQEDPAERPTLSTIVLMLTSNTVTLPVPRQPGLFFQSRIGKDPLDTDTTS 640          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 1.142e-27
Identity = 63/136 (46.32%), Postives = 91/136 (66.91%), Query Frame = -1
Query:   20 FSFGVLLLETVSGKKNRGFYHSNNELNLLGHVWRLWKEGKVLEMVDSSVDNY--PANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGFCLG-RNPIETDSSSSKHDETFTVNQVTVTMLNAR 418
            FSFGVL+LE + GKKN      ++ L LL +VW+ W+EG+VL +VD S+      ++E+++CIH+GLLCVQENAE RPTMASVV+ML++ + T+P+P  P F  G    +  D +   H    ++N VT+T  +AR
Sbjct:  532 FSFGVLVLEIIKGKKNNWSPEEDSSLFLLSYVWKSWREGEVLNIVDPSLVETIGVSDEIMKCIHIGLLCVQENAESRPTMASVVVMLNANSFTLPRPSQPAFYSGDGESLSRDKNQINH--IASLNDVTITEFDAR 665          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 1.948e-27
Identity = 56/134 (41.79%), Postives = 89/134 (66.42%), Query Frame = -1
Query:   35 FSFGVLLLETVSGKKNRGFYHSNNE-LNLLGHVWRLWKEGKVLEMVDSSV-DNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGFCLGRNPIETD----SSSSKHDETFTVNQVTVT 418
            +SFGVL+LE +SGKKN  FY+ ++   NL+ H WRLW+ G  LE+VD ++ ++Y ++E  RCIH+ LLCVQE+  +RP + ++++ML+S T T+  P+ PGFCL    +E D    + S+      ++N  ++T
Sbjct:  531 YSFGVLVLEIISGKKNSSFYNIDDSGSNLVTHAWRLWRNGSPLELVDPTIGESYQSSEATRCIHIALLCVQEDPADRPLLPAIIMMLTSSTTTLHVPRAPGFCLSGRDLEQDGVEYTESTSRSIPGSINDASIT 664          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.263e-26
Identity = 57/138 (41.30%), Postives = 92/138 (66.67%), Query Frame = -1
Query:   20 FSFGVLLLETVSGKKNRGFYHSNNELNLLGHVWRLWKEGKVLEMVDSSV-DNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGFCLG----RNPIETDSSSSKHDETFTVNQVTVTMLNAR 418
            +SFGVL+LE +SG+KN  F  S+   +LL H WRLW   K L++VD  + +N   +EV+RCIH+GLLCVQE+  +RP +++V +ML+S T T+P P+ PGF +     ++P+++D S++      +++  ++T L  R
Sbjct:  537 YSFGVLVLEIISGRKNSSFGESDGAQDLLTHAWRLWTNKKALDLVDPLIAENCQNSEVVRCIHIGLLCVQEDPAKRPAISTVFMMLTSNTVTLPVPRQPGFFIQCRAVKDPLDSDQSTTTKSFPASIDDESITDLYPR 674          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 2.813e-26
Identity = 57/117 (48.72%), Postives = 81/117 (69.23%), Query Frame = -1
Query:   77 FSFGVLLLETVSGKKNRGFYHSNNELNLLGHVWRLWKEGKVLEMVDSSVDNYPAN-EVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGFCLGRNPIE--TDSSSS 418
            +SFGVL+LE +SG+KN  F  S+   +LL H WRLW     L++VD  + N   N EV+RCIH+GLLCVQE+  +RPT+++V +ML+S T T+P P+ PGF +  +P++  TDS  S
Sbjct:  539 YSFGVLVLEIISGRKNSSFDESDGAQDLLTHTWRLWTNRTALDLVDPLIANNCQNSEVVRCIHIGLLCVQEDPAKRPTISTVFMMLTSNTVTLPVPRQPGFFIQSSPVKDPTDSDQS 655          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.813e-26
Identity = 54/138 (39.13%), Postives = 93/138 (67.39%), Query Frame = -1
Query:   20 FSFGVLLLETVSGKKNRGFYHSNNELNLLGHVWRLWKEGKVLEMVDSSV-DNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGFCL----GRNPIETDSSSSKHDETFTVNQVTVTMLNAR 418
            +SFGVL+LE +SG+KN  F  +++  +L+ H WRLW+ G  L++VD  + D+   +EV+RC H+GLLCVQE+  +RP M+++ +ML+S T  +P P+ PGF +    G N +++D S++    T +++  +++ L+ R
Sbjct:  522 YSFGVLVLEIISGRKNNSFIETDDAQDLVTHAWRLWRNGTALDLVDPFIADSCRKSEVVRCTHIGLLCVQEDPVKRPAMSTISVMLTSNTMALPAPQQPGFFVRSRPGTNRLDSDQSTTNKSVTVSIDDKSMSDLDPR 659          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.069e-25
Identity = 56/120 (46.67%), Postives = 77/120 (64.17%), Query Frame = -1
Query:   68 FSFGVLLLETVSGKKNRGFYHSNNELNLLGHVWRLWKEGKVLEMVDS---SVDNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGFCLGRNPIETDSSSSKHD 418
            +SFGVL+LE +SGKKN GF   ++  +L+   WR WKEG  L +VD    ++ +Y +N ++RCI++GLLCVQE   ERP+MASVVLML   T  + +P  P F    N +   SSS  H+
Sbjct:  531 YSFGVLVLEIISGKKNSGFSSEDSMGDLISFAWRNWKEGVALNLVDKILMTMSSYSSNMIMRCINIGLLCVQEKVAERPSMASVVLMLDGHTIALSEPSKPAFFSHSNAVSDSSSSLGHN 650          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.396e-25
Identity = 60/144 (41.67%), Postives = 93/144 (64.58%), Query Frame = -1
Query:   20 FSFGVLLLETVSGKKNRGFYHSNNELNLLGHVWRLWKEGKVLEMVDSSV-DNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGFCL-----GRNPIETDSSSSKHDET-----FTVNQVTVTMLNAR 418
            +SFGVL+LE ++GKKN  FY  +   +L+ +VW+LW E   LE+VD ++  N+  NEV+RCIH+ LLCVQE++ ERP+M  +++M++S T T+P PK  GF L      R+P  +  S+S H  T      +V+  ++T++  R
Sbjct:  533 YSFGVLVLELITGKKNSSFYEEDGLGDLVTYVWKLWVENSPLELVDEAMRGNFQTNEVIRCIHIALLCVQEDSSERPSMDDILVMMNSFTVTLPIPKRSGFLLRTMKDSRDP-RSGGSASDHSATSKSLPLSVDDSSITIVYPR 675          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.824e-25
Identity = 59/130 (45.38%), Postives = 83/130 (63.85%), Query Frame = -1
Query:   38 FSFGVLLLETVSGKKNRGFYHSNNEL--NLLGHVWRLWKEGKVLEMVDSSV-DNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGFCLGRNPIETDSSSSKHDETFTVNQVTV 418
            +SFGVL+LE +SGKKN   Y  +     NL+ + WRLW  G  LE+VD S  DNY  NEV RCIH+ LLCVQE AE+RPTM+++V ML++ +  +  P+ PGF            SSKH++   V+++++
Sbjct:  537 YSFGVLVLEIISGKKNSNVYQMDGTSAGNLVTYTWRLWSNGSPLELVDPSFRDNYRINEVSRCIHIALLCVQEEAEDRPTMSAIVQMLTTSSIALAVPQRPGFFF---------RSSKHEQVGLVDRLSI 657          
The following BLAST results are available for this feature:
BLAST of DN617645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
SRK6_BRAOE1.393e-3354.81Putative serine/threonine-protein kinase receptor ... [more]
CRK10_ARATH1.220e-2949.15Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
CRK41_ARATH1.142e-2746.32Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK35_ARATH1.948e-2741.79Putative cysteine-rich receptor-like protein kinas... [more]
CRK6_ARATH1.263e-2641.30Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
CRK8_ARATH2.813e-2648.72Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK7_ARATH2.813e-2639.13Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
CRK26_ARATH1.069e-2546.67Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRK25_ARATH1.396e-2541.67Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
CRK4_ARATH1.824e-2545.38Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617645 ID=DN617645; Name=DN617645; organism=Citrus sinensis; type=EST; length=418bp
ATACCTGTTTTTTTCACTACCTGGCATTTAACATTGTAACTGTGACCTGA
TTCACTGTAAATGTTTCATCATGCTTACTTGAAGATGAATCAGTTTCAAT
GGGATTTCTCCCTAGGCAAAATCCAGGGGTTTTAGGCTGGGGCATGGTTG
CAGTTTCACTACTCAACATCAAAACTACAGATGCCATAGTTGGCCTTTCT
TCAGCATTCTCTTGGACACATAAGAGGCCGACATGTATGCATCTCAGAAC
TTCATTTGCAGGATAATTATCCACTGATGAATCTACCATTTCCAACACCT
TTCCTTCCTTCCATAGTCTCCACACATGTCCAAGCAGGTTAAGTTCATTG
TTTGAGTGATAGAATCCTCTGTTCTTCTTACCACTTACTGTCTCCAATAA
TAAGACACCGAAACTAAA
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