DN617637

Overview
NameDN617637
Unique NameDN617637
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12606 contig Csv1_Contig12606:344..1024. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617637 vs. ExPASy Swiss-Prot
Match: TPP2_HUMAN (Tripeptidyl-peptidase 2 OS=Homo sapiens GN=TPP2 PE=1 SV=4)

HSP 1 Score: 125.561 bits (314), Expect = 2.461e-28
Identity = 76/218 (34.86%), Postives = 114/218 (52.29%), Query Frame = 3
Query:   33 VSFSRMSFLPGQIERRFIEVPLGATWVEATMRTSGFDTTRRFFVDTVQVCPLQRPLKWENVVTFSSPVSKNF---AFPVVGGQTMELAIAQFWSSGMGSHETTIVDFEIEFHGIAVNKDEVLLDGSEAPVRIDAEALLTSERLAPAAVLNKIRVPCRPIETKLTVLPTNRDKLPSXKQILALTLTYKFKLEDGAEVKPQIPLLNNRIYDTKFESQFYM 677
            ++F+ + F PGQI R FIEVP GATW E T+ +   + + +F +  VQ+   QR  +      F S   K     AFPV+GG+ +E  IA++W+    S     +D+ I FHGI     ++ +  SE   R D ++ L  E LAP   L       RP+  K   L  +RD LP+ +Q+  + LTY F      EV P  PLL   +Y+++F+SQ ++
Sbjct:  647 LAFTDVHFKPGQIRRHFIEVPEGATWAEVTVCSCSSEVSAKFVLHAVQLVK-QRAYRSHEFYKFCSLPEKGTLTEAFPVLGGKAIEFCIARWWA----SLSDVNIDYTISFHGIVCTAPQLNIHASEGINRFDVQSSLKYEDLAPCITLKNWVQTLRPVSAKTKPL-GSRDVLPNNRQLYEMVLTYNFHQPKSGEVTPSCPLLCELLYESEFDSQLWI 858          
BLAST of DN617637 vs. ExPASy Swiss-Prot
Match: TPP2_RAT (Tripeptidyl-peptidase 2 OS=Rattus norvegicus GN=Tpp2 PE=2 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 3.214e-28
Identity = 75/218 (34.40%), Postives = 114/218 (52.29%), Query Frame = 3
Query:   33 VSFSRMSFLPGQIERRFIEVPLGATWVEATMRTSGFDTTRRFFVDTVQVCPLQRPLKWENVVTFSSPVSKNF---AFPVVGGQTMELAIAQFWSSGMGSHETTIVDFEIEFHGIAVNKDEVLLDGSEAPVRIDAEALLTSERLAPAAVLNKIRVPCRPIETKLTVLPTNRDKLPSXKQILALTLTYKFKLEDGAEVKPQIPLLNNRIYDTKFESQFYM 677
            ++F+ + F PGQI R F+EVP GATW E T+ +   + + +F +  VQ+   QR  +      F S   K     AFPV+GG+ +E  IA++W+    S     +D+ I FHGI     ++ +  SE   R D ++ L  E LAP   L       RP+  K   L  +RD LP+ +Q+  + LTY F      EV P  PLL   +Y+++F+SQ ++
Sbjct:  647 LAFTDVHFKPGQIRRHFVEVPEGATWAEVTVCSCSSEVSAKFVLHAVQLVK-QRAYRSHEFYKFCSLPEKGTLIEAFPVLGGKAIEFCIARWWA----SLSDVNIDYTISFHGIVCTAPQLNIHASEGINRFDVQSSLKYEDLAPCITLKSWVQTLRPVNAKTRPL-GSRDVLPNNRQLYEMVLTYSFHQPKSGEVTPSCPLLCELLYESEFDSQLWI 858          
BLAST of DN617637 vs. ExPASy Swiss-Prot
Match: TPP2_MOUSE (Tripeptidyl-peptidase 2 OS=Mus musculus GN=Tpp2 PE=2 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 3.214e-28
Identity = 75/218 (34.40%), Postives = 114/218 (52.29%), Query Frame = 3
Query:   33 VSFSRMSFLPGQIERRFIEVPLGATWVEATMRTSGFDTTRRFFVDTVQVCPLQRPLKWENVVTFSSPVSKNF---AFPVVGGQTMELAIAQFWSSGMGSHETTIVDFEIEFHGIAVNKDEVLLDGSEAPVRIDAEALLTSERLAPAAVLNKIRVPCRPIETKLTVLPTNRDKLPSXKQILALTLTYKFKLEDGAEVKPQIPLLNNRIYDTKFESQFYM 677
            ++F+ + F PGQI R F+EVP GATW E T+ +   + + +F +  VQ+   QR  +      F S   K     AFPV+GG+ +E  IA++W+    S     +D+ I FHGI     ++ +  SE   R D ++ L  E LAP   L       RP+  K   L  +RD LP+ +Q+  + LTY F      EV P  PLL   +Y+++F+SQ ++
Sbjct:  647 LAFTDVHFKPGQIRRHFVEVPEGATWAEVTVCSCSSEVSAKFVLHAVQLVK-QRAYRSHEFYKFCSLPEKGTLIEAFPVLGGKAIEFCIARWWA----SLSDVNIDYTISFHGIVCTAPQLNIHASEGINRFDVQSSLKYEDLAPCITLKSWVQTLRPVNAKTRPL-GSRDVLPNNRQLYEMVLTYSFHQPKSGEVTPSCPLLCELLYESEFDSQLWI 858          
BLAST of DN617637 vs. ExPASy Swiss-Prot
Match: TPP2_BOVIN (Tripeptidyl-peptidase 2 OS=Bos taurus GN=TPP2 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.721e-27
Identity = 74/218 (33.94%), Postives = 113/218 (51.83%), Query Frame = 3
Query:   33 VSFSRMSFLPGQIERRFIEVPLGATWVEATMRTSGFDTTRRFFVDTVQVCPLQRPLKWENVVTFSSPVSKNF---AFPVVGGQTMELAIAQFWSSGMGSHETTIVDFEIEFHGIAVNKDEVLLDGSEAPVRIDAEALLTSERLAPAAVLNKIRVPCRPIETKLTVLPTNRDKLPSXKQILALTLTYKFKLEDGAEVKPQIPLLNNRIYDTKFESQFYM 677
            ++ + + F PGQI R FIEVP GATW E T+ +   + + +F +  VQ+   QR  +      F S   K     AFPV+GG+ +E  IA++W+    S     +D+ + FHGI     ++ +  SE   R D ++ L  E LAP   L       RP+  K   L  +RD LP+ +Q+  + LTY F      EV P  PLL   +Y+++F+SQ ++
Sbjct:  647 LALTDVHFKPGQIRRHFIEVPEGATWAEVTVCSCSSEVSAKFVLHAVQLVK-QRAYRSHEFYKFCSLPEKGTLTEAFPVLGGKAIEFCIARWWA----SLSDVNIDYTVSFHGIVCTAPQLNIHSSEGINRFDVQSSLKYEDLAPCITLKSWVQTLRPLSAKTKPL-GSRDVLPNNRQLYEMILTYNFHQPKSGEVTPSCPLLCELLYESEFDSQLWI 858          
BLAST of DN617637 vs. ExPASy Swiss-Prot
Match: TPP2_SCHPO (Putative tripeptidyl-peptidase P8A3.12c OS=Schizosaccharomyces pombe GN=SPAP8A3.12c PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.952e-15
Identity = 67/220 (30.45%), Postives = 105/220 (47.73%), Query Frame = 3
Query:   36 SFSRMSFLPGQIERRFIEVPLGATWVEATMR-TSGFDTTRRFFVDTVQVCPLQRPLKWENVVTFSSPVSKNFA----FPVVGGQTMELAIAQFWSSGMGSHETTIVDFEIEFHGI-AVNKDEVLLDGSEAPVRIDAEALLTSERLAPAAVLNKIRVPCRPIETKLTVLPTNRDKLPSXKQILALTLTYKFKLEDGAEVKPQIPLLNNRIYDTKFESQFYM 677
            S   +SF P  I+R F+  P GAT+VE  ++ TS  ++T   ++   Q  P Q  L  E       PV++N        +    T+EL +AQ+WSS     E  ++D ++ FHGI  VN  E+ L  S+   R+D  A +  E   P   L       +P  T +  L  +RD +P  +Q+  L  TY  ++ +  E+K    + +N +YD  F   F+M
Sbjct:  707 SLRDVSFEPTLIKRHFLVPPKGATYVEIRVKATSELESTNMLWISVNQTIP-QTKLN-EASTELIMPVTQNEVTTKLVSIDDSYTLELCMAQWWSS----LEPMVLDIDVNFHGIKVVNGKEINLISSQGLKRVDC-ASIRRENFKPDITLKDYVDSFKPTNTVIKPLG-DRDIMPDGQQLFELMATYSVEISEKTELKADFAVPHN-MYDNGFNGLFFM 917          
BLAST of DN617637 vs. ExPASy Swiss-Prot
Match: YQS6_CAEEL (Putative subtilase-type proteinase F21H12.6 OS=Caenorhabditis elegans GN=F21H12.6 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12
Identity = 60/207 (28.99%), Postives = 98/207 (47.34%), Query Frame = 3
Query:   42 SRMSFLPGQIERRFIEVPLGATWVEATMRTSGFDTTRRFFVDTVQVCPLQRPLKWENVVTFSSPVSKNF--AFPVVGGQTMELAIAQFWSSGMGSHETTIVDFEIEFHGIAVNKDEVLLDG-SEAPVRIDAEALLTSERLAPAAVLNKIRVPCRPIETKLTVLPTNRDKLPSXKQILALTLTYKFKLEDGAEVKPQIPLLNNRIYDT 653
            SR+    G  ERRF+EVP  AT  + T+R++  D   RF + TV +    +  +         P+   +  +  V GG+T+E  + + WS G    +   VD  I+F G+       L+ G +  P+R  A A   S  ++P+  L  + V  +P   K+  L      L S  QI  L LTY+ K++  +EV+ Q+  L   +Y++
Sbjct:  705 SRLVGKSGVTERRFVEVPSWATSAKITLRSTNKDEMDRFTLHTVYI-EDDKCSRNTETQKIQGPIGNEWSKSITVQGGKTLEACVVRAWSRGKNPVD---VDMTIDFFGVKKPTSISLIHGATNTPIRFQA-APTKSIDVSPSISLKSLVVSLKPQSAKVEPLGPRDMFLTSGLQINRLLLTYQLKVQKPSEVQLQLAGLTPYLYES 906          
The following BLAST results are available for this feature:
BLAST of DN617637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
TPP2_HUMAN2.461e-2834.86Tripeptidyl-peptidase 2 OS=Homo sapiens GN=TPP2 PE... [more]
TPP2_RAT3.214e-2834.40Tripeptidyl-peptidase 2 OS=Rattus norvegicus GN=Tp... [more]
TPP2_MOUSE3.214e-2834.40Tripeptidyl-peptidase 2 OS=Mus musculus GN=Tpp2 PE... [more]
TPP2_BOVIN2.721e-2733.94Tripeptidyl-peptidase 2 OS=Bos taurus GN=TPP2 PE=2... [more]
TPP2_SCHPO6.952e-1530.45Putative tripeptidyl-peptidase P8A3.12c OS=Schizos... [more]
YQS6_CAEEL1.893e-1228.99Putative subtilase-type proteinase F21H12.6 OS=Cae... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01H18_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617637 ID=DN617637; Name=DN617637; organism=Citrus sinensis; type=EST; length=681bp
AGCCTACAGCTGTAGTGAAACGGCCTCCACTTGTCTCATTTTCAAGGATG
TCATTCTTACCAGGCCAAATAGAACGGAGATTTATAGAGGTGCCACTTGG
TGCTACTTGGGTTGAGGCAACCATGCGGACATCCGGGTTTGATACGACTC
GGCGCTTTTTTGTTGACACCGTTCAGGTTTGTCCACTGCAAAGGCCTCTT
AAGTGGGAGAATGTTGTGACATTTTCTTCTCCAGTTTCCAAAAACTTTGC
CTTCCCTGTGGTGGGTGGCCAGACAATGGAATTAGCAATAGCTCAGTTTT
GGTCAAGTGGAATGGGAAGTCATGAAACCACTATTGTGGACTTTGAGATT
GAATTTCATGGAATTGCTGTCAATAAAGATGAAGTGCTGCTTGATGGAAG
TGAAGCACCTGTTAGGATTGATGCTGAAGCCCTATTAACATCCGAGAGAC
TTGCTCCTGCTGCTGTTCTTAATAAGATTAGAGTTCCATGTCGACCCATA
GAAACTAAACTTACAGTGCTTCCAACCAATCGTGATAAACTTCCCTCANG
CAAACAGATCCTAGCACTGACATTAACTTACAAGTTTAAACTGGAGGATG
GTGCTGAAGTGAAACCTCAGATTCCATTGCTTAACAATCGCATTTACGAC
ACTAAATTTGAGTCTCAGTTTTATATGGATT
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