DN617635

Overview
NameDN617635
Unique NameDN617635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length398
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11875 contig Csv1_Contig11875:31..428. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 9.232e-54
Identity = 98/120 (81.67%), Postives = 103/120 (85.83%), Query Frame = 2
Query:   38 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            MPNP+VFFDM+VGGQPAGRIVMELFAD TPRTAENFRALCTGEKG G+SGKPLHYK SSFHRVIPGFMCQ            ESIYG+KFADENF+KKHTGPGILSMANAGP TNGS FF
Sbjct:    1 MPNPRVFFDMSVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFF 120          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 7.815e-53
Identity = 96/120 (80.00%), Postives = 102/120 (85.00%), Query Frame = 2
Query:   38 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            M NPKVFFD+T+GG PAGR+VMELFAD TP+TAENFRALCTGEKGVGK GKPLHYKGS+FHRVIPGFMCQ            ESIYG+KF DENFVKKHTGPGILSMANAGPGTNGS FF
Sbjct:    1 MANPKVFFDLTIGGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFF 120          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 5.601e-51
Identity = 93/120 (77.50%), Postives = 100/120 (83.33%), Query Frame = 2
Query:   38 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            M NPKVFFDM + G PAGRIVMEL+AD TPRTAENFRALCTGEKGVG+SGKPLHYKGS+FHRVIP FMCQ            ESIYG+KFADENF+K+HTGPGILSMANAG GTNGS FF
Sbjct:    1 MSNPKVFFDMAIAGNPAGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFF 120          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 4.014e-49
Identity = 91/118 (77.12%), Postives = 97/118 (82.20%), Query Frame = 2
Query:   44 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            NPKV+FDMTVGG+ AGRIVMEL+AD TP TAENFRALCTGE+G+GK GKPLHYKGSSFHRVIP FMCQ            ESIYGSKF DENF+KKHTGPGILSMANAG  TNGS FF
Sbjct:    4 NPKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFF 121          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 9.886e-48
Identity = 88/118 (74.58%), Postives = 97/118 (82.20%), Query Frame = 2
Query:   44 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            +PKVFFDMT+GG PAG+IVMEL+ D TP+TAENFRALCTGEKGVG+SGKPLH+KGSSFHRVIP FMCQ            ESIYG+KF DENF +KHTGPGILSMANAG  TNGS FF
Sbjct:    4 HPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFF 121          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 3.757e-47
Identity = 89/120 (74.17%), Postives = 95/120 (79.17%), Query Frame = 2
Query:   38 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            M NPKV+FDMTVG + AGRIVMEL+AD  P TAENFRALCTGE+G+GKSGKPLHYKGS+FHRVIP FMCQ            ESIYG KF DENFVKKHTGPGILSM NAG  TNGS FF
Sbjct:    1 MVNPKVYFDMTVGDKAAGRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSMRNAGSNTNGSQFF 120          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 4.907e-47
Identity = 89/120 (74.17%), Postives = 95/120 (79.17%), Query Frame = 2
Query:   38 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            M  PKV+FDMT+ GQPAGRIVMEL+ D TPRTAENFRALCTGEKGVG +GKPLH+KGS FHRVIP FMCQ            ESIYGSKF DENF +KHTGPGILSMANAG  TNGS FF
Sbjct:    1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFF 120          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=1 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 6.408e-47
Identity = 87/120 (72.50%), Postives = 95/120 (79.17%), Query Frame = 2
Query:   38 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            M NPKVFFD+ +G   AGR+VMELFADVTPRTA NFRALCTGE G+GK+GK LHYKGS+FHR+IPGFMCQ            ESIYGSKF DENF  KHTGPGILSMAN+GP TNGS FF
Sbjct:    1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFF 120          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 8.369e-47
Identity = 88/120 (73.33%), Postives = 95/120 (79.17%), Query Frame = 2
Query:   38 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            M NP+VFFDMTVGG PAGRIVMEL+A+  P+TAENFRALCTGEKGVGKSGKPLHYKGS+FHRVIP FMCQ            ESIYG KF DE FV+K   PG+LSMANAGP TNGS FF
Sbjct:    1 MANPRVFFDMTVGGAPAGRIVMELYANEVPKTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFPDEKFVRKQPAPGVLSMANAGPNTNGSQFF 120          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 8.369e-47
Identity = 87/120 (72.50%), Postives = 95/120 (79.17%), Query Frame = 2
Query:   38 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            M NP+VFFDM++ G P GRI MELFAD TP TAENFRALCTGEKG+GK GKPLH+KGS FHRVIPGFMCQ            ESIYG+KF DENF+KKHTG GILSMAN+GP TNGS FF
Sbjct:    1 MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFF 120          
The following BLAST results are available for this feature:
BLAST of DN617635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
CYPH_CATRO9.232e-5481.67Peptidyl-prolyl cis-trans isomerase OS=Catharanthu... [more]
CYPH_SOLLC7.815e-5380.00Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
CYPH_LUPLU5.601e-5177.50Peptidyl-prolyl cis-trans isomerase OS=Lupinus lut... [more]
CP19A_ARATH4.014e-4977.12Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Ara... [more]
CP19B_ARATH9.886e-4874.58Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]
CYPH_BRANA3.757e-4774.17Peptidyl-prolyl cis-trans isomerase OS=Brassica na... [more]
CP18C_ARATH4.907e-4774.17Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Ara... [more]
CP19C_ARATH6.408e-4772.50Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Ara... [more]
CYPH_MAIZE8.369e-4773.33Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]
CP18D_ARATH8.369e-4772.50Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617635 ID=DN617635; Name=DN617635; organism=Citrus sinensis; type=EST; length=398bp
TTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATGCCAAACCCCA
AAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCGGCCGGCAGGATCGTG
ATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGAACTTCCGCGC
CCTCTGCACCGGCGAGAAAGGCGTCGGCAAGTCCGGCAAGCCTCTCCACT
ACAAAGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCATGTGCCAGGGG
GGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAATCTACGGCTC
GAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCC
TCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCATTTCTTCG
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