DN617624

Overview
NameDN617624
Unique NameDN617624
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length448
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3716 contig Csv1_Contig3716:1518..1965. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617624 vs. ExPASy Swiss-Prot
Match: UGPA_SOLTU (UTP--glucose-1-phosphate uridylyltransferase OS=Solanum tuberosum PE=1 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 3.436e-18
Identity = 41/52 (78.85%), Postives = 48/52 (92.31%), Query Frame = -1
Query:  293 ELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPGDL 448
            +LDSLKVTGDVWFG+ +TLKGKVT+AAKSG KLEIPDGAV+ NK+INGP D+
Sbjct:  426 DLDSLKVTGDVWFGSGVTLKGKVTVAAKSGVKLEIPDGAVIANKDINGPEDI 477          
BLAST of DN617624 vs. ExPASy Swiss-Prot
Match: UGPA2_ARATH (Probable UTP--glucose-1-phosphate uridylyltransferase 2 OS=Arabidopsis thaliana GN=At3g03250 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.227e-17
Identity = 42/52 (80.77%), Postives = 47/52 (90.38%), Query Frame = -1
Query:  293 ELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPGDL 448
            ELDSLKV+GDVWFG++I LKGKVT+AAKSG KLEIPD AV+ENK INGP DL
Sbjct:  418 ELDSLKVSGDVWFGSSIVLKGKVTVAAKSGVKLEIPDRAVVENKNINGPEDL 469          
BLAST of DN617624 vs. ExPASy Swiss-Prot
Match: UGPA_PYRPY (UTP--glucose-1-phosphate uridylyltransferase OS=Pyrus pyrifolia PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.444e-16
Identity = 40/52 (76.92%), Postives = 45/52 (86.54%), Query Frame = -1
Query:  293 ELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPGDL 448
            EL+SLKV+GDVWFGA + LKGKVTI AKSG KLEIPD AV+ NK+INGP DL
Sbjct:  420 ELESLKVSGDVWFGAGVVLKGKVTITAKSGVKLEIPDNAVIANKDINGPEDL 471          
BLAST of DN617624 vs. ExPASy Swiss-Prot
Match: UGPA_ASTPN (UTP--glucose-1-phosphate uridylyltransferase OS=Astragalus penduliflorus GN=UGP PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.444e-16
Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = -1
Query:  293 ELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPGDL 448
            ELDSLKV GDVWFG  + LKGKV+I AKSG K+EIPDGAV+ NKEINGP DL
Sbjct:  420 ELDSLKVVGDVWFGTGVILKGKVSIVAKSGVKVEIPDGAVIANKEINGPKDL 471          
BLAST of DN617624 vs. ExPASy Swiss-Prot
Match: UGPA1_ARATH (UTP--glucose-1-phosphate uridylyltransferase 1 OS=Arabidopsis thaliana GN=At5g17310 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.444e-16
Identity = 39/52 (75.00%), Postives = 45/52 (86.54%), Query Frame = -1
Query:  293 ELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPGDL 448
            ELDSLKV+GDVWFG+ + LKGKVT+ A +G KLEIPD AVLENK+INGP DL
Sbjct:  419 ELDSLKVSGDVWFGSGVVLKGKVTVKANAGTKLEIPDNAVLENKDINGPEDL 470          
BLAST of DN617624 vs. ExPASy Swiss-Prot
Match: UGPA_HORVU (UTP--glucose-1-phosphate uridylyltransferase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 5.486e-16
Identity = 40/52 (76.92%), Postives = 46/52 (88.46%), Query Frame = -1
Query:  293 ELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPGDL 448
            ELDSLKV+GDV FG+ + LKG VTIAAK+G KLEIPDGAVLENK+INGP D+
Sbjct:  422 ELDSLKVSGDVSFGSGVVLKGNVTIAAKAGVKLEIPDGAVLENKDINGPEDI 473          
BLAST of DN617624 vs. ExPASy Swiss-Prot
Match: UGPA_MUSAC (UTP--glucose-1-phosphate uridylyltransferase OS=Musa acuminata GN=UGPA PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 7.165e-16
Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = -1
Query:  293 ELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPGDL 448
            ELDSLKV+GDVWFG  + LKG V+IAAKSG KLEI DGAVLENK INGP D+
Sbjct:  416 ELDSLKVSGDVWFGEGVVLKGNVSIAAKSGVKLEISDGAVLENKVINGPEDI 467          
The following BLAST results are available for this feature:
BLAST of DN617624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
UGPA_SOLTU3.436e-1878.85UTP--glucose-1-phosphate uridylyltransferase OS=So... [more]
UGPA2_ARATH2.227e-1780.77Probable UTP--glucose-1-phosphate uridylyltransfer... [more]
UGPA_PYRPY1.444e-1676.92UTP--glucose-1-phosphate uridylyltransferase OS=Py... [more]
UGPA_ASTPN1.444e-1676.92UTP--glucose-1-phosphate uridylyltransferase OS=As... [more]
UGPA1_ARATH1.444e-1675.00UTP--glucose-1-phosphate uridylyltransferase 1 OS=... [more]
UGPA_HORVU5.486e-1676.92UTP--glucose-1-phosphate uridylyltransferase OS=Ho... [more]
UGPA_MUSAC7.165e-1676.92UTP--glucose-1-phosphate uridylyltransferase OS=Mu... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01H12_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617624 ID=DN617624; Name=DN617624; organism=Citrus sinensis; type=EST; length=448bp
GTAACAACTCCACTCTTTTATCATTATTATTCAACCCACTTAACGGAAAT
GATACAAGGGGCAAGGTTTTGCAGTTGCATATTGCAATATTCATCATATT
ATATATTTAGTTTTAGTCTGAAATAGTTACTGAAGCAACCGCTACATTGT
AGAGATCGATGAAATAAAAAATTAATACAAAATAAAATTTGGAATGAAAT
CCAACATCCAGCAAAACAAGACTCCGATCCTCAAGGTTCAAGATAAGCAC
TGAGCAGACCTCTTCGACAAGTAATCTACAGCATGTTCCTTACAGATCCC
CGGGGCCATTGATCTCCTTGTTTTCAAGTACAGCTCCATCAGGAATTTCC
AGTTTCTCCCCAGATTTGGCAGCAATAGTCACTTTCCCCTTGAGGGTAAT
ATTAGCACCAAACCATACGTCACCGGTCACCTTAAGGCTATCAAGCTC
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